RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 WFDC9Q8NEX5 89 aa6.42□□□□□ -1.38
CNOT4-212ENST00000541284 A0A0J9YWU9 116 aa6.42□□□□□ -1.38
CNOT4-212ENST00000541284 IGHV4-30-4P0DP06 118 aa6.42□□□□□ -1.38
CNOT4-212ENST00000541284 COX7CP15954 63 aa6.42□□□□□ -1.38
CNOT4-212ENST00000541284 TMEM126AQ9H061 195 aa6.42□□□□□ -1.38
CNOT4-212ENST00000541284 FASNP49327 2511 aaKnown RBP6.42□□□□□ -1.38
CNOT4-212ENST00000541284 UPK3BQ9BT76 320 aa6.42□□□□□ -1.38
CNOT4-212ENST00000541284 IGLV6-57P01721 117 aa6.41□□□□□ -1.38
CNOT4-212ENST00000541284 C6orf99Q4VX62 202 aa6.41□□□□□ -1.38
CNOT4-212ENST00000541284 ENHOQ6UWT2 76 aa6.41□□□□□ -1.38
CNOT4-212ENST00000541284 LINC00575Q6W349 94 aa6.41□□□□□ -1.38
CNOT4-212ENST00000541284 RPL18AQ02543 176 aaKnown RBP6.41□□□□□ -1.38
CNOT4-212ENST00000541284 C9orf66Q5T8R8 295 aa6.41□□□□□ -1.38
CNOT4-212ENST00000541284 SMIM20Q8N5G0 67 aa6.41□□□□□ -1.38
CNOT4-212ENST00000541284 CRYGAP11844 174 aa6.4□□□□□ -1.38
CNOT4-212ENST00000541284 CFAP161Q6P656 301 aa6.4□□□□□ -1.38
CNOT4-212ENST00000541284 M0R2N4 97 aa6.39□□□□□ -1.39
CNOT4-212ENST00000541284 DAD1P61803 113 aa6.39□□□□□ -1.39
CNOT4-212ENST00000541284 LELP1Q5T871 98 aa6.39□□□□□ -1.39
CNOT4-212ENST00000541284 C9orf153Q5TBE3 101 aa6.39□□□□□ -1.39
CNOT4-212ENST00000541284 DNAH6Q9C0G6 4158 aa6.39□□□□□ -1.39
CNOT4-212ENST00000541284 CYSRT1A8MQ03 144 aa6.39□□□□□ -1.39
CNOT4-212ENST00000541284 KRTAP26-1Q6PEX3 210 aa6.39□□□□□ -1.39
CNOT4-212ENST00000541284 GVQW2A0A096LPI5 108 aaPredicted RBP6.39□□□□□ -1.39
CNOT4-212ENST00000541284 TMEM256-PLSCR3K7ERE1 68 aa6.39□□□□□ -1.39
CNOT4-212ENST00000541284 ATOX1O00244 68 aa6.39□□□□□ -1.39
CNOT4-212ENST00000541284 SPAG11BQ08648 103 aa6.39□□□□□ -1.39
CNOT4-212ENST00000541284 JMJD7-PLA2G4BH0Y9G9 81 aa6.38□□□□□ -1.39
CNOT4-212ENST00000541284 COL7A1Q02388 2944 aa6.38□□□□□ -1.39
CNOT4-212ENST00000541284 MIFP14174 115 aa6.38□□□□□ -1.39
CNOT4-212ENST00000541284 TEP1Q99973 2627 aaKnown RBP6.38□□□□□ -1.39
CNOT4-212ENST00000541284 HIVEP2P31629 2446 aa6.38□□□□□ -1.39
CNOT4-212ENST00000541284 Q6ZQT0 140 aa6.38□□□□□ -1.39
CNOT4-212ENST00000541284 C6orf48Q9UBA6 75 aa6.38□□□□□ -1.39
CNOT4-212ENST00000541284 APOC4P55056 127 aa6.37□□□□□ -1.39
CNOT4-212ENST00000541284 MUC7Q8TAX7 377 aa6.37□□□□□ -1.39
CNOT4-212ENST00000541284 INAFM1C9JVW0 142 aa6.37□□□□□ -1.39
CNOT4-212ENST00000541284 LOC110117498A0A087WWA1 95 aa6.36□□□□□ -1.39
CNOT4-212ENST00000541284 USP17L23D6RBM5 183 aa6.36□□□□□ -1.39
CNOT4-212ENST00000541284 EGFEM1PQ0D2K5 195 aa6.36□□□□□ -1.39
CNOT4-212ENST00000541284 KLK12Q9UKR0 248 aa6.36□□□□□ -1.39
CNOT4-212ENST00000541284 MAST4O15021 2626 aa6.35□□□□□ -1.39
CNOT4-212ENST00000541284 DNAH10Q8IVF4 4471 aa6.35□□□□□ -1.39
CNOT4-212ENST00000541284 FAM19A1Q7Z5A9 133 aa6.35□□□□□ -1.39
CNOT4-212ENST00000541284 hADV29S1A0JD25 119 aa6.34□□□□□ -1.39
CNOT4-212ENST00000541284 SPART-AS1P0CW21 52 aa6.34□□□□□ -1.39
CNOT4-212ENST00000541284 SERP2Q8N6R1 65 aa6.34□□□□□ -1.39
CNOT4-212ENST00000541284 FRAS1Q86XX4 4008 aa6.34□□□□□ -1.39
CNOT4-212ENST00000541284 TRBV10-3A0A0K0K1G6 114 aa6.34□□□□□ -1.39
CNOT4-212ENST00000541284 ZNF561-AS1K7EIQ3 104 aa6.34□□□□□ -1.39
CNOT4-212ENST00000541284 NOTCH2Q04721 2471 aa6.33□□□□□ -1.4
CNOT4-212ENST00000541284 S100A7L2Q5SY68 101 aa6.33□□□□□ -1.4
CNOT4-212ENST00000541284 ATP5EP2Q5VTU8 51 aa6.33□□□□□ -1.4
CNOT4-212ENST00000541284 HTN3P15516 51 aa6.33□□□□□ -1.4
CNOT4-212ENST00000541284 VPREB1P12018 145 aa6.32□□□□□ -1.4
CNOT4-212ENST00000541284 WFDC10BQ8IUB3 73 aa6.32□□□□□ -1.4
CNOT4-212ENST00000541284 VPS13DQ5THJ4 4388 aa6.32□□□□□ -1.4
CNOT4-212ENST00000541284 XAGE1AQ9HD64 81 aa6.32□□□□□ -1.4
CNOT4-212ENST00000541284 Q6ZQY7 126 aa6.32□□□□□ -1.4
CNOT4-212ENST00000541284 C15orf56Q8N910 161 aa6.32□□□□□ -1.4
CNOT4-212ENST00000541284 ATRQ13535 2644 aa6.31□□□□□ -1.4
CNOT4-212ENST00000541284 TENM3Q9P273 2699 aa6.31□□□□□ -1.4
CNOT4-212ENST00000541284 HECTD1Q9ULT8 2610 aa6.31□□□□□ -1.4
CNOT4-212ENST00000541284 HECTD4Q9Y4D8 3996 aa6.31□□□□□ -1.4
CNOT4-212ENST00000541284 TRAV23DV6A0A075B6W5 121 aa6.31□□□□□ -1.4
CNOT4-212ENST00000541284 LOC107984640A0A0U1RRK4 108 aa6.31□□□□□ -1.4
CNOT4-212ENST00000541284 RBM3P98179 157 aaKnown RBP6.31□□□□□ -1.4
CNOT4-212ENST00000541284 ELOF1P60002 83 aaKnown RBP6.3□□□□□ -1.4
CNOT4-212ENST00000541284 TRBV7-4A0A0J9YYF1 115 aa6.3□□□□□ -1.4
CNOT4-212ENST00000541284 PLECQ15149 4684 aaKnown RBP6.3□□□□□ -1.4
CNOT4-212ENST00000541284 OXTP01178 125 aa6.29□□□□□ -1.4
CNOT4-212ENST00000541284 RETNQ9HD89 108 aa6.29□□□□□ -1.4
CNOT4-212ENST00000541284 Q6ZVQ6 151 aa6.29□□□□□ -1.4
CNOT4-212ENST00000541284 TRBV7-6A0A0J9YX20 115 aa6.28□□□□□ -1.4
CNOT4-212ENST00000541284 ZNF73O43830 326 aaPredicted RBP6.28□□□□□ -1.4
CNOT4-212ENST00000541284 HIGD2BQ4VC39 106 aa6.28□□□□□ -1.4
CNOT4-212ENST00000541284 Q6ZRU5 148 aa6.28□□□□□ -1.4
CNOT4-212ENST00000541284 H3BNG1 76 aa6.28□□□□□ -1.4
CNOT4-212ENST00000541284 LINC01547P58512 204 aaPredicted RBP6.28□□□□□ -1.4
CNOT4-212ENST00000541284 KRTAP10-11P60412 298 aa6.28□□□□□ -1.4
CNOT4-212ENST00000541284 STARD9Q9P2P6 4700 aa6.28□□□□□ -1.4
CNOT4-212ENST00000541284 DIRC1Q969H9 104 aa6.28□□□□□ -1.4
CNOT4-212ENST00000541284 UBL5Q9BZL1 73 aa6.27□□□□□ -1.41
CNOT4-212ENST00000541284 GHRHP01286 108 aa6.27□□□□□ -1.41
CNOT4-212ENST00000541284 KPRPQ5T749 579 aaPredicted RBP6.27□□□□□ -1.41
CNOT4-212ENST00000541284 LINC00528Q8N1L1 170 aa6.27□□□□□ -1.41
CNOT4-212ENST00000541284 DNAH2Q9P225 4427 aa6.27□□□□□ -1.41
CNOT4-212ENST00000541284 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.27□□□□□ -1.41
CNOT4-212ENST00000541284 RPS28P62857 69 aaKnown RBP6.26□□□□□ -1.41
CNOT4-212ENST00000541284 Q6ZTC4 211 aa6.26□□□□□ -1.41
CNOT4-212ENST00000541284 LAMTOR3Q9UHA4 124 aa6.26□□□□□ -1.41
CNOT4-212ENST00000541284 COX7BP24311 80 aa6.26□□□□□ -1.41
CNOT4-212ENST00000541284 TMEM258P61165 79 aa6.26□□□□□ -1.41
CNOT4-212ENST00000541284 ESRGQ1W209 222 aa6.26□□□□□ -1.41
CNOT4-212ENST00000541284 DPH3Q96FX2 82 aa6.26□□□□□ -1.41
CNOT4-212ENST00000541284 Q6ZRP5 223 aa6.25□□□□□ -1.41
CNOT4-212ENST00000541284 TRAV10A0A0B4J240 114 aa6.24□□□□□ -1.41
CNOT4-212ENST00000541284 KRTAP24-1Q3LI83 254 aa6.24□□□□□ -1.41
CNOT4-212ENST00000541284 CAMK2N2Q96S95 79 aa6.24□□□□□ -1.41
CNOT4-212ENST00000541284 NDUFC2-KCTD14E9PQ53 114 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms