RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 CHCHD10Q8WYQ3 142 aaPredicted RBP8.53□□□□□ -1.04
RNF4-222ENST00000541204 C2orf48Q96LS8 159 aa8.53□□□□□ -1.04
RNF4-222ENST00000541204 CD164L2Q6UWJ8 174 aa8.53□□□□□ -1.04
RNF4-222ENST00000541204 ATOX1O00244 68 aa8.52□□□□□ -1.05
RNF4-222ENST00000541204 LINC00167Q96N53 147 aa8.52□□□□□ -1.05
RNF4-222ENST00000541204 CCKP06307 115 aa8.51□□□□□ -1.05
RNF4-222ENST00000541204 Q8NDZ9 215 aa8.51□□□□□ -1.05
RNF4-222ENST00000541204 COL6A5A8TX70 2615 aa8.51□□□□□ -1.05
RNF4-222ENST00000541204 RPL18AQ02543 176 aaKnown RBP8.51□□□□□ -1.05
RNF4-222ENST00000541204 REG3AQ06141 175 aa8.51□□□□□ -1.05
RNF4-222ENST00000541204 TENM3Q9P273 2699 aa8.51□□□□□ -1.05
RNF4-222ENST00000541204 NDUFC2O95298 119 aa8.5□□□□□ -1.05
RNF4-222ENST00000541204 COX17Q14061 63 aa8.5□□□□□ -1.05
RNF4-222ENST00000541204 ANK2Q01484 3957 aa8.5□□□□□ -1.05
RNF4-222ENST00000541204 A0A1B0GX51 115 aa8.5□□□□□ -1.05
RNF4-222ENST00000541204 TMEM256-PLSCR3K7ERE1 68 aa8.49□□□□□ -1.05
RNF4-222ENST00000541204 C6orf99Q4VX62 202 aa8.49□□□□□ -1.05
RNF4-222ENST00000541204 JMJD7-PLA2G4BH0Y9G9 81 aa8.49□□□□□ -1.05
RNF4-222ENST00000541204 WIPF1O43516 503 aa8.48□□□□□ -1.05
RNF4-222ENST00000541204 C6orf223Q8N319 242 aa8.48□□□□□ -1.05
RNF4-222ENST00000541204 hADV29S1A0JD25 119 aa8.47□□□□□ -1.05
RNF4-222ENST00000541204 CRYGAP11844 174 aa8.47□□□□□ -1.05
RNF4-222ENST00000541204 C10orf25Q5T742 122 aa8.47□□□□□ -1.05
RNF4-222ENST00000541204 CYSTM1Q9H1C7 97 aa8.47□□□□□ -1.05
RNF4-222ENST00000541204 KLK12Q9UKR0 248 aa8.47□□□□□ -1.05
RNF4-222ENST00000541204 S100A7L2Q5SY68 101 aa8.47□□□□□ -1.05
RNF4-222ENST00000541204 USP17L23D6RBM5 183 aa8.46□□□□□ -1.06
RNF4-222ENST00000541204 PRB2P02812 416 aaPredicted RBP8.46□□□□□ -1.06
RNF4-222ENST00000541204 UNQ6190/PRO20217Q6UXQ8 127 aa8.46□□□□□ -1.06
RNF4-222ENST00000541204 Q6ZTC4 211 aa8.45□□□□□ -1.06
RNF4-222ENST00000541204 LELP1Q5T871 98 aa8.44□□□□□ -1.06
RNF4-222ENST00000541204 SERP2Q8N6R1 65 aa8.44□□□□□ -1.06
RNF4-222ENST00000541204 SPAG11BQ08648 103 aa8.44□□□□□ -1.06
RNF4-222ENST00000541204 LINC00575Q6W349 94 aa8.44□□□□□ -1.06
RNF4-222ENST00000541204 NBEAL1Q6ZS30 2694 aa8.43□□□□□ -1.06
RNF4-222ENST00000541204 LYPD5Q6UWN5 251 aa8.43□□□□□ -1.06
RNF4-222ENST00000541204 LOC107984640A0A0U1RRK4 108 aa8.43□□□□□ -1.06
RNF4-222ENST00000541204 CYSRT1A8MQ03 144 aa8.43□□□□□ -1.06
RNF4-222ENST00000541204 KPRPQ5T749 579 aaPredicted RBP8.42□□□□□ -1.06
RNF4-222ENST00000541204 FAM19A1Q7Z5A9 133 aa8.42□□□□□ -1.06
RNF4-222ENST00000541204 A0A0J9YWU9 116 aa8.41□□□□□ -1.06
RNF4-222ENST00000541204 ENHOQ6UWT2 76 aa8.41□□□□□ -1.06
RNF4-222ENST00000541204 WFDC10BQ8IUB3 73 aa8.41□□□□□ -1.06
RNF4-222ENST00000541204 UPK3BQ9BT76 320 aa8.41□□□□□ -1.06
RNF4-222ENST00000541204 BAHCC1Q9P281 2608 aa8.41□□□□□ -1.06
RNF4-222ENST00000541204 TRAV23DV6A0A075B6W5 121 aa8.4□□□□□ -1.06
RNF4-222ENST00000541204 RBM3P98179 157 aaKnown RBP8.39□□□□□ -1.07
RNF4-222ENST00000541204 UBL5Q9BZL1 73 aa8.39□□□□□ -1.07
RNF4-222ENST00000541204 LAMTOR3Q9UHA4 124 aa8.39□□□□□ -1.07
RNF4-222ENST00000541204 M0R2N4 97 aa8.39□□□□□ -1.07
RNF4-222ENST00000541204 IGLV6-57P01721 117 aa8.39□□□□□ -1.07
RNF4-222ENST00000541204 EGFEM1PQ0D2K5 195 aa8.39□□□□□ -1.07
RNF4-222ENST00000541204 ATP5EP2Q5VTU8 51 aa8.39□□□□□ -1.07
RNF4-222ENST00000541204 Q6ZQT0 140 aa8.39□□□□□ -1.07
RNF4-222ENST00000541204 ZNF561-AS1K7EIQ3 104 aa8.38□□□□□ -1.07
RNF4-222ENST00000541204 XAGE1AQ9HD64 81 aa8.38□□□□□ -1.07
RNF4-222ENST00000541204 GHRHP01286 108 aa8.37□□□□□ -1.07
RNF4-222ENST00000541204 Q6ZQY7 126 aa8.37□□□□□ -1.07
RNF4-222ENST00000541204 MRAPQ8TCY5 172 aa8.37□□□□□ -1.07
RNF4-222ENST00000541204 PRR34Q9NV39 138 aa8.37□□□□□ -1.07
RNF4-222ENST00000541204 CMYA5Q8N3K9 4069 aa8.37□□□□□ -1.07
RNF4-222ENST00000541204 MGAM2Q2M2H8 2515 aa8.36□□□□□ -1.07
RNF4-222ENST00000541204 TRBV10-3A0A0K0K1G6 114 aa8.36□□□□□ -1.07
RNF4-222ENST00000541204 J3KT08 172 aa8.36□□□□□ -1.07
RNF4-222ENST00000541204 C6orf48Q9UBA6 75 aa8.36□□□□□ -1.07
RNF4-222ENST00000541204 DEFB131BA0A096LNP1 70 aa8.35□□□□□ -1.07
RNF4-222ENST00000541204 ESRGQ1W209 222 aa8.35□□□□□ -1.07
RNF4-222ENST00000541204 MUC7Q8TAX7 377 aa8.35□□□□□ -1.07
RNF4-222ENST00000541204 LOC110117498A0A087WWA1 95 aa8.35□□□□□ -1.07
RNF4-222ENST00000541204 HIGD2BQ4VC39 106 aa8.35□□□□□ -1.07
RNF4-222ENST00000541204 C11orf45Q8TAV5 145 aa8.35□□□□□ -1.07
RNF4-222ENST00000541204 DSCR8Q96T75 97 aa8.34□□□□□ -1.07
RNF4-222ENST00000541204 TMEM258P61165 79 aa8.33□□□□□ -1.08
RNF4-222ENST00000541204 GVQW2A0A096LPI5 108 aaPredicted RBP8.33□□□□□ -1.08
RNF4-222ENST00000541204 HAMPP81172 84 aa8.32□□□□□ -1.08
RNF4-222ENST00000541204 FAM19A5Q7Z5A7 132 aaPredicted RBP8.32□□□□□ -1.08
RNF4-222ENST00000541204 DIRC1Q969H9 104 aa8.32□□□□□ -1.08
RNF4-222ENST00000541204 LINC01547P58512 204 aaPredicted RBP8.32□□□□□ -1.08
RNF4-222ENST00000541204 DPH3Q96FX2 82 aa8.32□□□□□ -1.08
RNF4-222ENST00000541204 Q6ZVQ6 151 aa8.31□□□□□ -1.08
RNF4-222ENST00000541204 ZNF73O43830 326 aaPredicted RBP8.31□□□□□ -1.08
RNF4-222ENST00000541204 RPS28P62857 69 aaKnown RBP8.3□□□□□ -1.08
RNF4-222ENST00000541204 H3BNG1 76 aa8.29□□□□□ -1.08
RNF4-222ENST00000541204 C20orf197Q8N268 126 aa8.29□□□□□ -1.08
RNF4-222ENST00000541204 COX7BP24311 80 aa8.28□□□□□ -1.08
RNF4-222ENST00000541204 CAMK2N2Q96S95 79 aa8.28□□□□□ -1.08
RNF4-222ENST00000541204 IGKV2D-24A0A075B6R9 120 aa8.28□□□□□ -1.08
RNF4-222ENST00000541204 ELOF1P60002 83 aaKnown RBP8.27□□□□□ -1.08
RNF4-222ENST00000541204 OXTP01178 125 aa8.27□□□□□ -1.09
RNF4-222ENST00000541204 VPREB1P12018 145 aa8.27□□□□□ -1.09
RNF4-222ENST00000541204 PDE6GP18545 87 aa8.27□□□□□ -1.09
RNF4-222ENST00000541204 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.27□□□□□ -1.09
RNF4-222ENST00000541204 TRAV10A0A0B4J240 114 aa8.26□□□□□ -1.09
RNF4-222ENST00000541204 H3BQ85 93 aa8.26□□□□□ -1.09
RNF4-222ENST00000541204 Q6ZRU5 148 aa8.26□□□□□ -1.09
RNF4-222ENST00000541204 C1orf43Q9BWL3 253 aa8.26□□□□□ -1.09
RNF4-222ENST00000541204 TRBV7-4A0A0J9YYF1 115 aa8.25□□□□□ -1.09
RNF4-222ENST00000541204 K7EIL1 84 aa8.25□□□□□ -1.09
RNF4-222ENST00000541204 KRTAP26-1Q6PEX3 210 aa8.25□□□□□ -1.09
RNF4-222ENST00000541204 SCXQ7RTU7 201 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms