RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 APOC3P02656 99 aa15.29■□□□□ 0.04
CHFR-218ENST00000540963 H3BRM9 83 aa15.28■□□□□ 0.04
CHFR-218ENST00000540963 ATP5LO75964 103 aa15.28■□□□□ 0.04
CHFR-218ENST00000540963 NDUFA6P56556 154 aa15.28■□□□□ 0.04
CHFR-218ENST00000540963 LINC01547P58512 204 aaPredicted RBP15.28■□□□□ 0.04
CHFR-218ENST00000540963 HBDP02042 147 aa15.27■□□□□ 0.04
CHFR-218ENST00000540963 C11orf86A6NJI1 115 aa15.26■□□□□ 0.03
CHFR-218ENST00000540963 ASB16-AS1Q495Z4 193 aa15.26■□□□□ 0.03
CHFR-218ENST00000540963 C3orf22Q8N5N4 141 aa15.26■□□□□ 0.03
CHFR-218ENST00000540963 Q8NDZ9 215 aa15.26■□□□□ 0.03
CHFR-218ENST00000540963 VPREB1P12018 145 aa15.25■□□□□ 0.03
CHFR-218ENST00000540963 LINC00337Q8N6G1 96 aa15.25■□□□□ 0.03
CHFR-218ENST00000540963 PFN2P35080 140 aa15.24■□□□□ 0.03
CHFR-218ENST00000540963 TMEM238C9JI98 176 aa15.23■□□□□ 0.03
CHFR-218ENST00000540963 M0R378 163 aa15.23■□□□□ 0.03
CHFR-218ENST00000540963 RPL24P83731 157 aaKnown RBP15.23■□□□□ 0.03
CHFR-218ENST00000540963 CBLN2Q8IUK8 224 aa15.23■□□□□ 0.03
CHFR-218ENST00000540963 KRTAP13-3Q3SY46 172 aa15.22■□□□□ 0.03
CHFR-218ENST00000540963 BAGE3Q86Y29 109 aa15.22■□□□□ 0.03
CHFR-218ENST00000540963 SND1-IT1Q9HBX3 110 aa15.21■□□□□ 0.03
CHFR-218ENST00000540963 C4orf48Q5BLP8 95 aa15.2■□□□□ 0.02
CHFR-218ENST00000540963 ZNF625Q96I27 306 aaPredicted RBP15.2■□□□□ 0.02
CHFR-218ENST00000540963 ERG28Q9UKR5 140 aa15.2■□□□□ 0.02
CHFR-218ENST00000540963 SNAPINO95295 136 aa15.19■□□□□ 0.02
CHFR-218ENST00000540963 COX17Q14061 63 aa15.19■□□□□ 0.02
CHFR-218ENST00000540963 SVBPQ8N300 66 aa15.18■□□□□ 0.02
CHFR-218ENST00000540963 SPRR4Q96PI1 79 aa15.16■□□□□ 0.02
CHFR-218ENST00000540963 SEC61BP60468 96 aaKnown RBP15.15■□□□□ 0.02
CHFR-218ENST00000540963 TMEM170BQ5T4T1 132 aa15.15■□□□□ 0.02
CHFR-218ENST00000540963 HIGD2AQ9BW72 106 aa15.15■□□□□ 0.02
CHFR-218ENST00000540963 CRCT1Q9UGL9 99 aa15.14■□□□□ 0.01
CHFR-218ENST00000540963 ZNF706Q9Y5V0 76 aaPredicted RBP15.14■□□□□ 0.01
CHFR-218ENST00000540963 CHTOPQ9Y3Y2 248 aaKnown RBP15.13■□□□□ 0.01
CHFR-218ENST00000540963 TMEM223A0PJW6 202 aa15.12■□□□□ 0.01
CHFR-218ENST00000540963 FSIP2Q5CZC0 6907 aa15.12■□□□□ 0.01
CHFR-218ENST00000540963 SPINK1P00995 79 aa15.1■□□□□ 0.01
CHFR-218ENST00000540963 NDUFA5Q16718 116 aa15.1■□□□□ 0.01
CHFR-218ENST00000540963 CHCHD1Q96BP2 118 aaKnown RBP15.1■□□□□ 0.01
CHFR-218ENST00000540963 TRAV12-1A0A0B4J245 112 aa15.09■□□□□ 0.01
CHFR-218ENST00000540963 SFTA2Q6UW10 78 aa15.09■□□□□ 0.01
CHFR-218ENST00000540963 KRTAP4-1Q9BYQ7 146 aa15.09■□□□□ 0.01
CHFR-218ENST00000540963 Q8NBF4 154 aa15.08■□□□□ 0
CHFR-218ENST00000540963 IFI27L1Q96BM0 104 aa15.08■□□□□ 0
CHFR-218ENST00000540963 FAM19A2Q8N3H0 131 aa15.06■□□□□ 0
CHFR-218ENST00000540963 LINC00310P59036 64 aa15.05■□□□□ -0
CHFR-218ENST00000540963 A0A0U1RRA0 63 aa15.04■□□□□ -0
CHFR-218ENST00000540963 DAND5Q8N907 189 aa15.03■□□□□ -0
CHFR-218ENST00000540963 LINC00158P58513 81 aa15.02■□□□□ -0
CHFR-218ENST00000540963 NDUFA12Q9UI09 145 aa15.02■□□□□ -0
CHFR-218ENST00000540963 RPS29P62273 56 aaKnown RBP15□□□□□ -0.01
CHFR-218ENST00000540963 SMIM13P0DJ93 91 aa14.99□□□□□ -0.01
CHFR-218ENST00000540963 TRGC2P03986 189 aa14.98□□□□□ -0.01
CHFR-218ENST00000540963 PRYO14603 147 aa14.97□□□□□ -0.01
CHFR-218ENST00000540963 HSBP1O75506 76 aa14.95□□□□□ -0.02
CHFR-218ENST00000540963 SPRR1AP35321 89 aa14.95□□□□□ -0.02
CHFR-218ENST00000540963 LINC00483Q53H64 154 aa14.95□□□□□ -0.02
CHFR-218ENST00000540963 TSPEAR-AS2P59090 65 aa14.94□□□□□ -0.02
CHFR-218ENST00000540963 XP32Q5T750 250 aa14.93□□□□□ -0.02
CHFR-218ENST00000540963 MIR7-3HGQ8N6C7 128 aa14.93□□□□□ -0.02
CHFR-218ENST00000540963 SMCR5Q8TEV8 140 aa14.93□□□□□ -0.02
CHFR-218ENST00000540963 SERF1AO75920 110 aa14.92□□□□□ -0.02
CHFR-218ENST00000540963 Q8N377 158 aa14.92□□□□□ -0.02
CHFR-218ENST00000540963 KCNQ1DNQ9H478 68 aa14.92□□□□□ -0.02
CHFR-218ENST00000540963 SSBP3-AS1Q7Z2R9 100 aa14.9□□□□□ -0.02
CHFR-218ENST00000540963 BOD1L2Q8IYS8 172 aa14.9□□□□□ -0.02
CHFR-218ENST00000540963 SLC7A5P1Q8MH63 180 aa14.9□□□□□ -0.02
CHFR-218ENST00000540963 KRTAP4-16G5E9R7 235 aaPredicted RBP14.89□□□□□ -0.03
CHFR-218ENST00000540963 SLC25A20O43772 301 aa14.89□□□□□ -0.03
CHFR-218ENST00000540963 H0Y8G0 127 aa14.88□□□□□ -0.03
CHFR-218ENST00000540963 LCE2CQ5TA81 110 aa14.88□□□□□ -0.03
CHFR-218ENST00000540963 ETDCA0A1B0GVM5 59 aa14.87□□□□□ -0.03
CHFR-218ENST00000540963 NCR3O14931 201 aa14.87□□□□□ -0.03
CHFR-218ENST00000540963 HERV-K104P63124 156 aa14.87□□□□□ -0.03
CHFR-218ENST00000540963 MEIG1Q5JSS6 88 aa14.87□□□□□ -0.03
CHFR-218ENST00000540963 COLCA2A8K830 154 aa14.86□□□□□ -0.03
CHFR-218ENST00000540963 LEPROTL1O95214 131 aa14.86□□□□□ -0.03
CHFR-218ENST00000540963 PMCHL2Q9BQD1 86 aa14.84□□□□□ -0.03
CHFR-218ENST00000540963 LEPROTO15243 131 aa14.83□□□□□ -0.04
CHFR-218ENST00000540963 MOBPQ13875 183 aa14.83□□□□□ -0.04
CHFR-218ENST00000540963 GAGE2AQ6NT46 116 aa14.83□□□□□ -0.04
CHFR-218ENST00000540963 LOC107984156A0A0G2JMH3 177 aa14.82□□□□□ -0.04
CHFR-218ENST00000540963 TRBV10-3A0A0K0K1G6 114 aa14.82□□□□□ -0.04
CHFR-218ENST00000540963 MYMXA0A1B0GTQ4 84 aa14.82□□□□□ -0.04
CHFR-218ENST00000540963 ARL17AQ8IVW1 177 aa14.82□□□□□ -0.04
CHFR-218ENST00000540963 ATP6V1G1O75348 118 aa14.81□□□□□ -0.04
CHFR-218ENST00000540963 FABP4P15090 132 aa14.81□□□□□ -0.04
CHFR-218ENST00000540963 CFC1BP0CG36 223 aa14.8□□□□□ -0.04
CHFR-218ENST00000540963 S100A12P80511 92 aa14.8□□□□□ -0.04
CHFR-218ENST00000540963 IGLV9-49A0A0B4J1Y8 123 aa14.79□□□□□ -0.04
CHFR-218ENST00000540963 KRTAP19-2Q3LHN2 52 aa14.78□□□□□ -0.04
CHFR-218ENST00000540963 J3QQQ9 107 aa14.77□□□□□ -0.05
CHFR-218ENST00000540963 LINC00587B1AMM8 73 aa14.76□□□□□ -0.05
CHFR-218ENST00000540963 B5MCH6 92 aa14.76□□□□□ -0.05
CHFR-218ENST00000540963 PLNP26678 52 aa14.76□□□□□ -0.05
CHFR-218ENST00000540963 EIF4EBP3O60516 100 aaPredicted RBP14.75□□□□□ -0.05
CHFR-218ENST00000540963 DPM2O94777 84 aa14.75□□□□□ -0.05
CHFR-218ENST00000540963 MT1HP80294 61 aa14.75□□□□□ -0.05
CHFR-218ENST00000540963 HSPB8Q9UJY1 196 aa14.74□□□□□ -0.05
CHFR-218ENST00000540963 ERC2-IT1O76042 136 aa14.73□□□□□ -0.05
CHFR-218ENST00000540963 MAP1LC3CQ9BXW4 147 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms