RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 UPK3BQ9BT76 320 aa8.34□□□□□ -1.07
NPC1-202ENST00000540608 C6orf223Q8N319 242 aa8.33□□□□□ -1.08
NPC1-202ENST00000540608 A0A0J9YWU9 116 aa8.33□□□□□ -1.08
NPC1-202ENST00000540608 IGHV4-30-4P0DP06 118 aa8.33□□□□□ -1.08
NPC1-202ENST00000540608 SPAG11BQ08648 103 aa8.33□□□□□ -1.08
NPC1-202ENST00000540608 C9orf66Q5T8R8 295 aa8.33□□□□□ -1.08
NPC1-202ENST00000540608 CYSTM1Q9H1C7 97 aa8.33□□□□□ -1.08
NPC1-202ENST00000540608 UBL5Q9BZL1 73 aa8.32□□□□□ -1.08
NPC1-202ENST00000540608 TRBV10-3A0A0K0K1G6 114 aa8.32□□□□□ -1.08
NPC1-202ENST00000540608 CYSRT1A8MQ03 144 aa8.32□□□□□ -1.08
NPC1-202ENST00000540608 IGLV6-57P01721 117 aa8.32□□□□□ -1.08
NPC1-202ENST00000540608 APOC4P55056 127 aa8.32□□□□□ -1.08
NPC1-202ENST00000540608 RBM3P98179 157 aaKnown RBP8.32□□□□□ -1.08
NPC1-202ENST00000540608 NOTCH2Q04721 2471 aa8.31□□□□□ -1.08
NPC1-202ENST00000540608 ZNF561-AS1K7EIQ3 104 aa8.31□□□□□ -1.08
NPC1-202ENST00000540608 LELP1Q5T871 98 aa8.31□□□□□ -1.08
NPC1-202ENST00000540608 LOC110117498A0A087WWA1 95 aa8.31□□□□□ -1.08
NPC1-202ENST00000540608 INAFM1C9JVW0 142 aa8.31□□□□□ -1.08
NPC1-202ENST00000540608 RPS28P62857 69 aaKnown RBP8.31□□□□□ -1.08
NPC1-202ENST00000540608 Q6ZQT0 140 aa8.31□□□□□ -1.08
NPC1-202ENST00000540608 J3KT08 172 aa8.3□□□□□ -1.08
NPC1-202ENST00000540608 ENHOQ6UWT2 76 aa8.3□□□□□ -1.08
NPC1-202ENST00000540608 WFDC9Q8NEX5 89 aa8.3□□□□□ -1.08
NPC1-202ENST00000540608 PRR34Q9NV39 138 aa8.3□□□□□ -1.08
NPC1-202ENST00000540608 CELA1Q9UNI1 258 aa8.3□□□□□ -1.08
NPC1-202ENST00000540608 NSD1Q96L73 2696 aaPredicted RBP8.3□□□□□ -1.08
NPC1-202ENST00000540608 LOC107984640A0A0U1RRK4 108 aa8.29□□□□□ -1.08
NPC1-202ENST00000540608 FAM19A1Q7Z5A9 133 aa8.29□□□□□ -1.08
NPC1-202ENST00000540608 Q8NAQ8 132 aa8.29□□□□□ -1.08
NPC1-202ENST00000540608 GVQW2A0A096LPI5 108 aaPredicted RBP8.29□□□□□ -1.08
NPC1-202ENST00000540608 MIFP14174 115 aa8.29□□□□□ -1.08
NPC1-202ENST00000540608 TMEM258P61165 79 aa8.29□□□□□ -1.08
NPC1-202ENST00000540608 LAMTOR3Q9UHA4 124 aa8.28□□□□□ -1.08
NPC1-202ENST00000540608 H3BQ85 93 aa8.28□□□□□ -1.08
NPC1-202ENST00000540608 KLK12Q9UKR0 248 aa8.28□□□□□ -1.08
NPC1-202ENST00000540608 TRAV23DV6A0A075B6W5 121 aa8.27□□□□□ -1.08
NPC1-202ENST00000540608 SPART-AS1P0CW21 52 aa8.27□□□□□ -1.08
NPC1-202ENST00000540608 TRRAPQ9Y4A5 3859 aa8.27□□□□□ -1.08
NPC1-202ENST00000540608 GHRHP01286 108 aa8.27□□□□□ -1.09
NPC1-202ENST00000540608 HTN3P15516 51 aa8.26□□□□□ -1.09
NPC1-202ENST00000540608 PDE6GP18545 87 aa8.25□□□□□ -1.09
NPC1-202ENST00000540608 Q6ZQY7 126 aa8.25□□□□□ -1.09
NPC1-202ENST00000540608 DSCR8Q96T75 97 aa8.25□□□□□ -1.09
NPC1-202ENST00000540608 C6orf48Q9UBA6 75 aa8.25□□□□□ -1.09
NPC1-202ENST00000540608 ATRQ13535 2644 aa8.25□□□□□ -1.09
NPC1-202ENST00000540608 DPH3Q96FX2 82 aa8.24□□□□□ -1.09
NPC1-202ENST00000540608 DIRC1Q969H9 104 aa8.24□□□□□ -1.09
NPC1-202ENST00000540608 M0R2N4 97 aa8.23□□□□□ -1.09
NPC1-202ENST00000540608 FAM19A5Q7Z5A7 132 aaPredicted RBP8.23□□□□□ -1.09
NPC1-202ENST00000540608 TEP1Q99973 2627 aaKnown RBP8.23□□□□□ -1.09
NPC1-202ENST00000540608 LINC01547P58512 204 aaPredicted RBP8.22□□□□□ -1.09
NPC1-202ENST00000540608 XAGE1AQ9HD64 81 aa8.22□□□□□ -1.09
NPC1-202ENST00000540608 HIVEP1P15822 2718 aa8.22□□□□□ -1.09
NPC1-202ENST00000540608 BCE1O60756 84 aa8.22□□□□□ -1.09
NPC1-202ENST00000540608 Q6ZVQ6 151 aa8.22□□□□□ -1.09
NPC1-202ENST00000540608 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.22□□□□□ -1.09
NPC1-202ENST00000540608 ZNF73O43830 326 aaPredicted RBP8.21□□□□□ -1.1
NPC1-202ENST00000540608 TRBV7-6A0A0J9YX20 115 aa8.21□□□□□ -1.1
NPC1-202ENST00000540608 COX7BP24311 80 aa8.21□□□□□ -1.1
NPC1-202ENST00000540608 NDUFC2-KCTD14E9PQ53 114 aa8.2□□□□□ -1.1
NPC1-202ENST00000540608 HAMPP81172 84 aa8.2□□□□□ -1.1
NPC1-202ENST00000540608 ELOF1P60002 83 aaKnown RBP8.2□□□□□ -1.1
NPC1-202ENST00000540608 CXCL6P80162 114 aa8.19□□□□□ -1.1
NPC1-202ENST00000540608 TRBV7-4A0A0J9YYF1 115 aa8.19□□□□□ -1.1
NPC1-202ENST00000540608 TRAV7A0A075B6U4 112 aa8.18□□□□□ -1.1
NPC1-202ENST00000540608 VPREB1P12018 145 aa8.18□□□□□ -1.1
NPC1-202ENST00000540608 CAMK2N2Q96S95 79 aa8.17□□□□□ -1.1
NPC1-202ENST00000540608 C20orf197Q8N268 126 aa8.17□□□□□ -1.1
NPC1-202ENST00000540608 M0R378 163 aa8.16□□□□□ -1.1
NPC1-202ENST00000540608 EGFEM1PQ0D2K5 195 aa8.16□□□□□ -1.1
NPC1-202ENST00000540608 HIGD2BQ4VC39 106 aa8.16□□□□□ -1.1
NPC1-202ENST00000540608 KRTAP26-1Q6PEX3 210 aa8.16□□□□□ -1.1
NPC1-202ENST00000540608 OXTP01178 125 aa8.15□□□□□ -1.1
NPC1-202ENST00000540608 WFDC10BQ8IUB3 73 aa8.15□□□□□ -1.1
NPC1-202ENST00000540608 TRAV10A0A0B4J240 114 aa8.15□□□□□ -1.11
NPC1-202ENST00000540608 H3BNG1 76 aa8.15□□□□□ -1.11
NPC1-202ENST00000540608 Q6ZRU5 148 aa8.14□□□□□ -1.11
NPC1-202ENST00000540608 WIPF1O43516 503 aa8.14□□□□□ -1.11
NPC1-202ENST00000540608 KPRPQ5T749 579 aaPredicted RBP8.13□□□□□ -1.11
NPC1-202ENST00000540608 LINC00528Q8N1L1 170 aa8.13□□□□□ -1.11
NPC1-202ENST00000540608 C15orf56Q8N910 161 aa8.12□□□□□ -1.11
NPC1-202ENST00000540608 RETNQ9HD89 108 aa8.12□□□□□ -1.11
NPC1-202ENST00000540608 PKD1L1Q8TDX9 2849 aa8.11□□□□□ -1.11
NPC1-202ENST00000540608 OXLD1Q5BKU9 147 aa8.11□□□□□ -1.11
NPC1-202ENST00000540608 H7BZZ5 65 aa8.1□□□□□ -1.11
NPC1-202ENST00000540608 KLKP1Q107X0 134 aa8.1□□□□□ -1.11
NPC1-202ENST00000540608 BAHCC1Q9P281 2608 aa8.1□□□□□ -1.11
NPC1-202ENST00000540608 C5orf47Q569G3 176 aa8.1□□□□□ -1.11
NPC1-202ENST00000540608 FAM236DA0A1B0GTK5 79 aa8.1□□□□□ -1.11
NPC1-202ENST00000540608 FAM236CP0DP71 79 aa8.1□□□□□ -1.11
NPC1-202ENST00000540608 F8WDY8 70 aa8.09□□□□□ -1.11
NPC1-202ENST00000540608 KRTAP10-11P60412 298 aa8.09□□□□□ -1.11
NPC1-202ENST00000540608 Q6ZRP5 223 aa8.09□□□□□ -1.11
NPC1-202ENST00000540608 SCXQ7RTU7 201 aa8.09□□□□□ -1.11
NPC1-202ENST00000540608 ANK2Q01484 3957 aa8.08□□□□□ -1.12
NPC1-202ENST00000540608 ESRGQ1W209 222 aa8.08□□□□□ -1.12
NPC1-202ENST00000540608 Q6ZTC4 211 aa8.07□□□□□ -1.12
NPC1-202ENST00000540608 C1orf43Q9BWL3 253 aa8.07□□□□□ -1.12
NPC1-202ENST00000540608 Q5XG85 94 aa8.05□□□□□ -1.12
NPC1-202ENST00000540608 TM2D3Q9BRN9 247 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms