RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 LINC00587B1AMM8 73 aa8.19□□□□□ -1.1
CCDC130-202ENST00000540216 IGKCP01834 107 aa8.19□□□□□ -1.1
CCDC130-202ENST00000540216 S100A6P06703 90 aa8.19□□□□□ -1.1
CCDC130-202ENST00000540216 AKR1D1P51857 326 aa8.19□□□□□ -1.1
CCDC130-202ENST00000540216 HERVK_113P61574 105 aa8.19□□□□□ -1.1
CCDC130-202ENST00000540216 DIRC1Q969H9 104 aa8.19□□□□□ -1.1
CCDC130-202ENST00000540216 SND1-IT1Q9HBX3 110 aa8.19□□□□□ -1.1
CCDC130-202ENST00000540216 PKHD1L1Q86WI1 4243 aa8.19□□□□□ -1.1
CCDC130-202ENST00000540216 LEPROTO15243 131 aa8.18□□□□□ -1.1
CCDC130-202ENST00000540216 MT1HL1P0DM35 61 aa8.18□□□□□ -1.1
CCDC130-202ENST00000540216 COA6Q5JTJ3 125 aaKnown RBP8.18□□□□□ -1.1
CCDC130-202ENST00000540216 PLEKHB2Q96CS7 222 aa8.18□□□□□ -1.1
CCDC130-202ENST00000540216 NDUFA12Q9UI09 145 aa8.18□□□□□ -1.1
CCDC130-202ENST00000540216 MYMXA0A1B0GTQ4 84 aa8.17□□□□□ -1.1
CCDC130-202ENST00000540216 LINC00158P58513 81 aa8.17□□□□□ -1.1
CCDC130-202ENST00000540216 RPL24P83731 157 aaKnown RBP8.17□□□□□ -1.1
CCDC130-202ENST00000540216 LINC00167Q96N53 147 aa8.17□□□□□ -1.1
CCDC130-202ENST00000540216 SYS1-DBNDD2H3BUS1 97 aa8.16□□□□□ -1.1
CCDC130-202ENST00000540216 VPREB1P12018 145 aa8.16□□□□□ -1.1
CCDC130-202ENST00000540216 H0Y9J4 135 aa8.15□□□□□ -1.1
CCDC130-202ENST00000540216 NMUP48645 174 aa8.15□□□□□ -1.1
CCDC130-202ENST00000540216 MEIG1Q5JSS6 88 aa8.15□□□□□ -1.1
CCDC130-202ENST00000540216 PMCHL2Q9BQD1 86 aa8.15□□□□□ -1.1
CCDC130-202ENST00000540216 LRP1Q07954 4544 aaKnown RBP8.14□□□□□ -1.11
CCDC130-202ENST00000540216 GAGE10A6NGK3 116 aa8.14□□□□□ -1.11
CCDC130-202ENST00000540216 PCP4L1A6NKN8 68 aa8.14□□□□□ -1.11
CCDC130-202ENST00000540216 J3QQQ9 107 aa8.14□□□□□ -1.11
CCDC130-202ENST00000540216 C5orf52A6NGY3 159 aa8.13□□□□□ -1.11
CCDC130-202ENST00000540216 RPL37AP8A6NKH3 93 aa8.13□□□□□ -1.11
CCDC130-202ENST00000540216 ZNF861PO60384 105 aa8.13□□□□□ -1.11
CCDC130-202ENST00000540216 BCE1O60756 84 aa8.13□□□□□ -1.11
CCDC130-202ENST00000540216 SMIM13P0DJ93 91 aa8.13□□□□□ -1.11
CCDC130-202ENST00000540216 LGALS3P17931 250 aaKnown RBP8.13□□□□□ -1.11
CCDC130-202ENST00000540216 TSPEAR-AS2P59090 65 aa8.13□□□□□ -1.11
CCDC130-202ENST00000540216 LINC01545Q5VT33 79 aa8.13□□□□□ -1.11
CCDC130-202ENST00000540216 PET117Q6UWS5 81 aa8.13□□□□□ -1.11
CCDC130-202ENST00000540216 A0A0U1RRA0 63 aa8.12□□□□□ -1.11
CCDC130-202ENST00000540216 RPL28P46779 137 aaKnown RBP8.12□□□□□ -1.11
CCDC130-202ENST00000540216 E9PLD3 99 aa8.11□□□□□ -1.11
CCDC130-202ENST00000540216 MIR7-3HGQ8N6C7 128 aa8.11□□□□□ -1.11
CCDC130-202ENST00000540216 IGLV1-50A0A075B6I6 118 aa8.1□□□□□ -1.11
CCDC130-202ENST00000540216 KRTAP10-8P60410 259 aa8.1□□□□□ -1.11
CCDC130-202ENST00000540216 IGKV2-28A0A075B6P5 120 aa8.09□□□□□ -1.11
CCDC130-202ENST00000540216 IGKV2D-28P01615 120 aa8.09□□□□□ -1.11
CCDC130-202ENST00000540216 C3orf79P0CE67 100 aa8.09□□□□□ -1.11
CCDC130-202ENST00000540216 BOD1L2Q8IYS8 172 aa8.09□□□□□ -1.11
CCDC130-202ENST00000540216 Q8NDZ9 215 aa8.09□□□□□ -1.11
CCDC130-202ENST00000540216 FAT3Q8TDW7 4589 aa8.09□□□□□ -1.11
CCDC130-202ENST00000540216 IGKV2D-26A0A0A0MRZ7 120 aa8.08□□□□□ -1.12
CCDC130-202ENST00000540216 C20orf202A1L168 122 aa8.08□□□□□ -1.12
CCDC130-202ENST00000540216 M0R378 163 aa8.08□□□□□ -1.12
CCDC130-202ENST00000540216 KRTDAPP60985 99 aa8.08□□□□□ -1.12
CCDC130-202ENST00000540216 LOC107984156A0A0G2JMH3 177 aa8.07□□□□□ -1.12
CCDC130-202ENST00000540216 S100A2P29034 98 aa8.07□□□□□ -1.12
CCDC130-202ENST00000540216 UBE2AP49459 152 aa8.07□□□□□ -1.12
CCDC130-202ENST00000540216 ARL17AQ8IVW1 177 aa8.07□□□□□ -1.12
CCDC130-202ENST00000540216 KRTAP1-4P0C5Y4 121 aa8.06□□□□□ -1.12
CCDC130-202ENST00000540216 SNRPEP62304 92 aaKnown RBP8.06□□□□□ -1.12
CCDC130-202ENST00000540216 KRTAP13-1Q8IUC0 172 aa8.06□□□□□ -1.12
CCDC130-202ENST00000540216 TMEM126AQ9H061 195 aa8.06□□□□□ -1.12
CCDC130-202ENST00000540216 MIEN1Q9BRT3 115 aa8.05□□□□□ -1.12
CCDC130-202ENST00000540216 A0A0J9YXY3 114 aa8.04□□□□□ -1.12
CCDC130-202ENST00000540216 TMEM238C9JI98 176 aa8.04□□□□□ -1.12
CCDC130-202ENST00000540216 RPL13AP40429 203 aaKnown RBP8.04□□□□□ -1.12
CCDC130-202ENST00000540216 DAND5Q8N907 189 aa8.04□□□□□ -1.12
CCDC130-202ENST00000540216 PRYO14603 147 aa8.03□□□□□ -1.12
CCDC130-202ENST00000540216 NCR3O14931 201 aa8.03□□□□□ -1.12
CCDC130-202ENST00000540216 FAM19A1Q7Z5A9 133 aa8.03□□□□□ -1.12
CCDC130-202ENST00000540216 PRR26Q8N8Z3 221 aa8.03□□□□□ -1.12
CCDC130-202ENST00000540216 TRBV10-2A0A0K0K1G8 114 aa8.02□□□□□ -1.13
CCDC130-202ENST00000540216 TIMM17BO60830 172 aa8.02□□□□□ -1.13
CCDC130-202ENST00000540216 ZNF815PA8K554 130 aa8.01□□□□□ -1.13
CCDC130-202ENST00000540216 NDUFC2O95298 119 aa8.01□□□□□ -1.13
CCDC130-202ENST00000540216 HIST3H2BBQ8N257 126 aa8.01□□□□□ -1.13
CCDC130-202ENST00000540216 KCNQ1DNQ9H478 68 aa8.01□□□□□ -1.13
CCDC130-202ENST00000540216 SPANXB1Q9NS25 103 aaPredicted RBP8.01□□□□□ -1.13
CCDC130-202ENST00000540216 TSTD3H0UI37 97 aa8□□□□□ -1.13
CCDC130-202ENST00000540216 PRLHP81277 87 aa8□□□□□ -1.13
CCDC130-202ENST00000540216 UBR4Q5T4S7 5183 aa7.99□□□□□ -1.13
CCDC130-202ENST00000540216 ADAMTSL4-AS1Q5T5F5 129 aa7.99□□□□□ -1.13
CCDC130-202ENST00000540216 HIST1H2BLQ99880 126 aa7.99□□□□□ -1.13
CCDC130-202ENST00000540216 TRBV10-3A0A0K0K1G6 114 aa7.98□□□□□ -1.13
CCDC130-202ENST00000540216 SPRR1AP35321 89 aa7.98□□□□□ -1.13
CCDC130-202ENST00000540216 LINC00337Q8N6G1 96 aa7.98□□□□□ -1.13
CCDC130-202ENST00000540216 LITAFQ99732 161 aa7.98□□□□□ -1.13
CCDC130-202ENST00000540216 CRYGAP11844 174 aa7.97□□□□□ -1.13
CCDC130-202ENST00000540216 DDTP30046 118 aa7.97□□□□□ -1.13
CCDC130-202ENST00000540216 SOSTDC1Q6X4U4 206 aa7.97□□□□□ -1.13
CCDC130-202ENST00000540216 FAM229BQ4G0N7 80 aa7.96□□□□□ -1.14
CCDC130-202ENST00000540216 S100A7L2Q5SY68 101 aa7.96□□□□□ -1.14
CCDC130-202ENST00000540216 ATOH7Q8N100 152 aa7.96□□□□□ -1.14
CCDC130-202ENST00000540216 HMCN2Q8NDA2 5059 aa7.96□□□□□ -1.14
CCDC130-202ENST00000540216 ETDCA0A1B0GVM5 59 aa7.95□□□□□ -1.14
CCDC130-202ENST00000540216 KRTAP4-16G5E9R7 235 aaPredicted RBP7.95□□□□□ -1.14
CCDC130-202ENST00000540216 IGLV6-57P01721 117 aa7.95□□□□□ -1.14
CCDC130-202ENST00000540216 NPC2P61916 151 aa7.95□□□□□ -1.14
CCDC130-202ENST00000540216 ANKRD39Q53RE8 183 aa7.95□□□□□ -1.14
CCDC130-202ENST00000540216 SCGB1D4Q6XE38 83 aa7.95□□□□□ -1.14
CCDC130-202ENST00000540216 LINC00308Q8TCZ7 52 aa7.95□□□□□ -1.14
CCDC130-202ENST00000540216 HIGD2AQ9BW72 106 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms