RNA–Protein interactions for RNA: ENST00000540183.1

SEMA4D-222, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-222ENST00000540183 A0A0U1RRA0 63 aa8.06□□□□□ -1.12
SEMA4D-222ENST00000540183 CTAG1AP78358 180 aa8.06□□□□□ -1.12
SEMA4D-222ENST00000540183 COX17Q14061 63 aa8.06□□□□□ -1.12
SEMA4D-222ENST00000540183 TMEM218A2RU14 115 aa8.05□□□□□ -1.12
SEMA4D-222ENST00000540183 KRTAP13-3Q3SY46 172 aa8.05□□□□□ -1.12
SEMA4D-222ENST00000540183 Q8NBF4 154 aa8.05□□□□□ -1.12
SEMA4D-222ENST00000540183 S100PP25815 95 aa8.04□□□□□ -1.12
SEMA4D-222ENST00000540183 LINC00158P58513 81 aa8.04□□□□□ -1.12
SEMA4D-222ENST00000540183 CLLU1Q5K131 121 aa8.04□□□□□ -1.12
SEMA4D-222ENST00000540183 SPAG11AQ6PDA7 123 aa8.04□□□□□ -1.12
SEMA4D-222ENST00000540183 TMEM170BQ5T4T1 132 aa8.03□□□□□ -1.12
SEMA4D-222ENST00000540183 FP248Q71RG6 208 aaPredicted RBP8.03□□□□□ -1.12
SEMA4D-222ENST00000540183 C4orf48Q5BLP8 95 aa8.02□□□□□ -1.13
SEMA4D-222ENST00000540183 BAGE3Q86Y29 109 aa8.02□□□□□ -1.13
SEMA4D-222ENST00000540183 LINC00337Q8N6G1 96 aa8.02□□□□□ -1.13
SEMA4D-222ENST00000540183 NCR3O14931 201 aa8.01□□□□□ -1.13
SEMA4D-222ENST00000540183 HBDP02042 147 aa8.01□□□□□ -1.13
SEMA4D-222ENST00000540183 ASB16-AS1Q495Z4 193 aa8.01□□□□□ -1.13
SEMA4D-222ENST00000540183 C18orf32Q8TCD1 76 aa8.01□□□□□ -1.13
SEMA4D-222ENST00000540183 SMCR5Q8TEV8 140 aa8.01□□□□□ -1.13
SEMA4D-222ENST00000540183 LINC00614P0C842 121 aa8□□□□□ -1.13
SEMA4D-222ENST00000540183 COX19Q49B96 90 aa8□□□□□ -1.13
SEMA4D-222ENST00000540183 UQCC3Q6UW78 93 aa8□□□□□ -1.13
SEMA4D-222ENST00000540183 SMIM13P0DJ93 91 aa7.99□□□□□ -1.13
SEMA4D-222ENST00000540183 SEC11CQ9BY50 192 aa7.99□□□□□ -1.13
SEMA4D-222ENST00000540183 ZNF706Q9Y5V0 76 aaPredicted RBP7.99□□□□□ -1.13
SEMA4D-222ENST00000540183 PRYO14603 147 aa7.98□□□□□ -1.13
SEMA4D-222ENST00000540183 SPRR1AP35321 89 aa7.98□□□□□ -1.13
SEMA4D-222ENST00000540183 BOD1L2Q8IYS8 172 aa7.98□□□□□ -1.13
SEMA4D-222ENST00000540183 CHTOPQ9Y3Y2 248 aaKnown RBP7.98□□□□□ -1.13
SEMA4D-222ENST00000540183 TMEM223A0PJW6 202 aa7.97□□□□□ -1.13
SEMA4D-222ENST00000540183 KRTAP4-16G5E9R7 235 aaPredicted RBP7.97□□□□□ -1.13
SEMA4D-222ENST00000540183 LINC01547P58512 204 aaPredicted RBP7.97□□□□□ -1.13
SEMA4D-222ENST00000540183 IFITM2Q01629 132 aa7.97□□□□□ -1.13
SEMA4D-222ENST00000540183 SFTA2Q6UW10 78 aa7.96□□□□□ -1.14
SEMA4D-222ENST00000540183 MIR7-3HGQ8N6C7 128 aa7.96□□□□□ -1.14
SEMA4D-222ENST00000540183 KCNQ1DNQ9H478 68 aa7.96□□□□□ -1.14
SEMA4D-222ENST00000540183 RPS10P5Q9NQ39 176 aa7.96□□□□□ -1.14
SEMA4D-222ENST00000540183 TRAPPC1Q9Y5R8 145 aa7.96□□□□□ -1.14
SEMA4D-222ENST00000540183 TRBV10-3A0A0K0K1G6 114 aa7.95□□□□□ -1.14
SEMA4D-222ENST00000540183 ETDCA0A1B0GVM5 59 aa7.95□□□□□ -1.14
SEMA4D-222ENST00000540183 ERC2-IT1O76042 136 aa7.95□□□□□ -1.14
SEMA4D-222ENST00000540183 LINC00483Q53H64 154 aa7.95□□□□□ -1.14
SEMA4D-222ENST00000540183 GAGE2AQ6NT46 116 aa7.95□□□□□ -1.14
SEMA4D-222ENST00000540183 IGLV9-49A0A0B4J1Y8 123 aa7.94□□□□□ -1.14
SEMA4D-222ENST00000540183 SPINK1P00995 79 aa7.94□□□□□ -1.14
SEMA4D-222ENST00000540183 MOBPQ13875 183 aa7.94□□□□□ -1.14
SEMA4D-222ENST00000540183 MEIG1Q5JSS6 88 aa7.94□□□□□ -1.14
SEMA4D-222ENST00000540183 ATP6V1G1O75348 118 aa7.93□□□□□ -1.14
SEMA4D-222ENST00000540183 LCE2DQ5TA82 110 aaPredicted RBP7.93□□□□□ -1.14
SEMA4D-222ENST00000540183 COMMD7Q86VX2 200 aa7.93□□□□□ -1.14
SEMA4D-222ENST00000540183 Q8N377 158 aa7.93□□□□□ -1.14
SEMA4D-222ENST00000540183 FSIP2Q5CZC0 6907 aa7.93□□□□□ -1.14
SEMA4D-222ENST00000540183 B5MCH6 92 aa7.92□□□□□ -1.14
SEMA4D-222ENST00000540183 SEC61BP60468 96 aaKnown RBP7.92□□□□□ -1.14
SEMA4D-222ENST00000540183 C10orf91Q5T1B1 145 aa7.92□□□□□ -1.14
SEMA4D-222ENST00000540183 RHEBQ15382 184 aa7.91□□□□□ -1.14
SEMA4D-222ENST00000540183 IFI27L1Q96BM0 104 aa7.9□□□□□ -1.14
SEMA4D-222ENST00000540183 Q9BRP9 147 aa7.9□□□□□ -1.14
SEMA4D-222ENST00000540183 TRAV12-1A0A0B4J245 112 aa7.89□□□□□ -1.15
SEMA4D-222ENST00000540183 LCE2CQ5TA81 110 aa7.89□□□□□ -1.15
SEMA4D-222ENST00000540183 TSPEAR-AS2P59090 65 aa7.88□□□□□ -1.15
SEMA4D-222ENST00000540183 XP32Q5T750 250 aa7.88□□□□□ -1.15
SEMA4D-222ENST00000540183 NDUFA12Q9UI09 145 aa7.88□□□□□ -1.15
SEMA4D-222ENST00000540183 HERV-K104P63124 156 aa7.87□□□□□ -1.15
SEMA4D-222ENST00000540183 DDTP30046 118 aa7.86□□□□□ -1.15
SEMA4D-222ENST00000540183 SSBP3-AS1Q7Z2R9 100 aa7.86□□□□□ -1.15
SEMA4D-222ENST00000540183 CRCT1Q9UGL9 99 aa7.86□□□□□ -1.15
SEMA4D-222ENST00000540183 SLC25A20O43772 301 aa7.85□□□□□ -1.15
SEMA4D-222ENST00000540183 RPS29P62273 56 aaKnown RBP7.85□□□□□ -1.15
SEMA4D-222ENST00000540183 MYMXA0A1B0GTQ4 84 aa7.84□□□□□ -1.15
SEMA4D-222ENST00000540183 H0Y8G0 127 aa7.84□□□□□ -1.15
SEMA4D-222ENST00000540183 KRTAP19-2Q3LHN2 52 aa7.84□□□□□ -1.15
SEMA4D-222ENST00000540183 Q6ZRX8 168 aa7.84□□□□□ -1.15
SEMA4D-222ENST00000540183 FAM19A2Q8N3H0 131 aa7.84□□□□□ -1.15
SEMA4D-222ENST00000540183 C9orf153Q5TBE3 101 aa7.83□□□□□ -1.16
SEMA4D-222ENST00000540183 ST20-AS1Q8NBB2 130 aa7.83□□□□□ -1.16
SEMA4D-222ENST00000540183 CHCHD1Q96BP2 118 aaKnown RBP7.83□□□□□ -1.16
SEMA4D-222ENST00000540183 LOC107984156A0A0G2JMH3 177 aa7.82□□□□□ -1.16
SEMA4D-222ENST00000540183 ARL17AQ8IVW1 177 aa7.82□□□□□ -1.16
SEMA4D-222ENST00000540183 MAP1LC3CQ9BXW4 147 aa7.82□□□□□ -1.16
SEMA4D-222ENST00000540183 LINC00587B1AMM8 73 aa7.81□□□□□ -1.16
SEMA4D-222ENST00000540183 S100A12P80511 92 aa7.81□□□□□ -1.16
SEMA4D-222ENST00000540183 TRBV10-2A0A0K0K1G8 114 aa7.8□□□□□ -1.16
SEMA4D-222ENST00000540183 LEPROTO15243 131 aa7.8□□□□□ -1.16
SEMA4D-222ENST00000540183 EIF4EBP3O60516 100 aaPredicted RBP7.8□□□□□ -1.16
SEMA4D-222ENST00000540183 APOC3P02656 99 aa7.8□□□□□ -1.16
SEMA4D-222ENST00000540183 YPEL4Q96NS1 127 aa7.8□□□□□ -1.16
SEMA4D-222ENST00000540183 IGLV6-57P01721 117 aa7.79□□□□□ -1.16
SEMA4D-222ENST00000540183 NPC2P61916 151 aa7.79□□□□□ -1.16
SEMA4D-222ENST00000540183 MT1HP80294 61 aa7.79□□□□□ -1.16
SEMA4D-222ENST00000540183 SPANXB1Q9NS25 103 aaPredicted RBP7.79□□□□□ -1.16
SEMA4D-222ENST00000540183 TRAV23DV6A0A075B6W5 121 aa7.78□□□□□ -1.16
SEMA4D-222ENST00000540183 PCOTHQ58A44 107 aa7.78□□□□□ -1.16
SEMA4D-222ENST00000540183 SOSTDC1Q6X4U4 206 aa7.78□□□□□ -1.16
SEMA4D-222ENST00000540183 J3QQQ9 107 aa7.77□□□□□ -1.17
SEMA4D-222ENST00000540183 HSBP1O75506 76 aa7.77□□□□□ -1.17
SEMA4D-222ENST00000540183 S100A7L2Q5SY68 101 aa7.77□□□□□ -1.17
SEMA4D-222ENST00000540183 HRCT1Q6UXD1 115 aa7.77□□□□□ -1.17
SEMA4D-222ENST00000540183 PMCHL2Q9BQD1 86 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms