RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 CHTOPQ9Y3Y2 248 aaKnown RBP6.8□□□□□ -1.32
CLSTN3-209ENST00000539982 TRBV30A0A0K0K1B3 111 aa6.79□□□□□ -1.32
CLSTN3-209ENST00000539982 NDUFC2-KCTD14E9PQ53 114 aa6.79□□□□□ -1.32
CLSTN3-209ENST00000539982 F8VRH5 84 aa6.79□□□□□ -1.32
CLSTN3-209ENST00000539982 DPM2O94777 84 aa6.79□□□□□ -1.32
CLSTN3-209ENST00000539982 KIAA0087Q14695 138 aa6.79□□□□□ -1.32
CLSTN3-209ENST00000539982 TPRXLQ17RH7 258 aa6.79□□□□□ -1.32
CLSTN3-209ENST00000539982 ZC2HC1BQ5TFG8 222 aa6.79□□□□□ -1.32
CLSTN3-209ENST00000539982 MUC17Q685J3 4493 aa6.78□□□□□ -1.32
CLSTN3-209ENST00000539982 IGKCP01834 107 aa6.78□□□□□ -1.32
CLSTN3-209ENST00000539982 PLNP26678 52 aa6.78□□□□□ -1.32
CLSTN3-209ENST00000539982 ATOH7Q8N100 152 aa6.78□□□□□ -1.32
CLSTN3-209ENST00000539982 RETNLBQ9BQ08 111 aa6.78□□□□□ -1.32
CLSTN3-209ENST00000539982 CRCT1Q9UGL9 99 aa6.78□□□□□ -1.32
CLSTN3-209ENST00000539982 RPL28P46779 137 aaKnown RBP6.77□□□□□ -1.33
CLSTN3-209ENST00000539982 S100A12P80511 92 aa6.77□□□□□ -1.33
CLSTN3-209ENST00000539982 LBHQ53QV2 105 aaPredicted RBP6.77□□□□□ -1.33
CLSTN3-209ENST00000539982 VAMP8Q9BV40 100 aa6.77□□□□□ -1.33
CLSTN3-209ENST00000539982 C22orf24Q9Y442 160 aa6.77□□□□□ -1.33
CLSTN3-209ENST00000539982 IGLV7-46A0A075B6I9 117 aa6.76□□□□□ -1.33
CLSTN3-209ENST00000539982 HSBP1L1C9JCN9 74 aa6.76□□□□□ -1.33
CLSTN3-209ENST00000539982 IGLC3P0DOY3 106 aa6.76□□□□□ -1.33
CLSTN3-209ENST00000539982 C2orf82Q6UX34 121 aa6.76□□□□□ -1.33
CLSTN3-209ENST00000539982 TINCRA0A1B0GVN0 87 aa6.74□□□□□ -1.33
CLSTN3-209ENST00000539982 C11orf86A6NJI1 115 aa6.74□□□□□ -1.33
CLSTN3-209ENST00000539982 BCE1O60756 84 aa6.74□□□□□ -1.33
CLSTN3-209ENST00000539982 SEC11AP67812 179 aa6.74□□□□□ -1.33
CLSTN3-209ENST00000539982 KRTAP13-2Q52LG2 175 aa6.74□□□□□ -1.33
CLSTN3-209ENST00000539982 ANAPC11Q9NYG5 84 aa6.74□□□□□ -1.33
CLSTN3-209ENST00000539982 PAM16Q9Y3D7 125 aa6.74□□□□□ -1.33
CLSTN3-209ENST00000539982 LINC01547P58512 204 aaPredicted RBP6.73□□□□□ -1.33
CLSTN3-209ENST00000539982 SPATA45Q537H7 98 aa6.73□□□□□ -1.33
CLSTN3-209ENST00000539982 FAM19A3Q7Z5A8 133 aa6.73□□□□□ -1.33
CLSTN3-209ENST00000539982 LINC00304Q8N9R0 145 aa6.73□□□□□ -1.33
CLSTN3-209ENST00000539982 GEMIN7Q9H840 131 aaKnown RBP6.73□□□□□ -1.33
CLSTN3-209ENST00000539982 HERVK_113P63121 156 aa6.72□□□□□ -1.33
CLSTN3-209ENST00000539982 CTAG1AP78358 180 aa6.72□□□□□ -1.33
CLSTN3-209ENST00000539982 TMEM170BQ5T4T1 132 aa6.72□□□□□ -1.33
CLSTN3-209ENST00000539982 LINC00242Q5T6M2 205 aa6.72□□□□□ -1.33
CLSTN3-209ENST00000539982 TP73-AS1Q9UF72 201 aa6.72□□□□□ -1.33
CLSTN3-209ENST00000539982 ZNF22P17026 224 aaPredicted RBP6.71□□□□□ -1.34
CLSTN3-209ENST00000539982 HERVK_113P61574 105 aa6.71□□□□□ -1.34
CLSTN3-209ENST00000539982 FAM229BQ4G0N7 80 aa6.71□□□□□ -1.34
CLSTN3-209ENST00000539982 LINC01561Q8N1V8 128 aa6.71□□□□□ -1.34
CLSTN3-209ENST00000539982 LINC00469Q8N7U9 141 aa6.71□□□□□ -1.34
CLSTN3-209ENST00000539982 IGLV5-45A0A087WSX0 123 aa6.7□□□□□ -1.34
CLSTN3-209ENST00000539982 ANKRD39Q53RE8 183 aa6.7□□□□□ -1.34
CLSTN3-209ENST00000539982 MRPL55Q7Z7F7 128 aaKnown RBP6.7□□□□□ -1.34
CLSTN3-209ENST00000539982 PPDPFQ9H3Y8 114 aa6.7□□□□□ -1.34
CLSTN3-209ENST00000539982 XAGE1AQ9HD64 81 aa6.7□□□□□ -1.34
CLSTN3-209ENST00000539982 TMEM223A0PJW6 202 aa6.69□□□□□ -1.34
CLSTN3-209ENST00000539982 E9PLD3 99 aa6.69□□□□□ -1.34
CLSTN3-209ENST00000539982 H3BRM9 83 aa6.69□□□□□ -1.34
CLSTN3-209ENST00000539982 CKS1BP61024 79 aa6.69□□□□□ -1.34
CLSTN3-209ENST00000539982 CDKN2A-AS1Q9UH64 79 aa6.69□□□□□ -1.34
CLSTN3-209ENST00000539982 TSTD3H0UI37 97 aa6.68□□□□□ -1.34
CLSTN3-209ENST00000539982 PRSS2P07478 247 aa6.68□□□□□ -1.34
CLSTN3-209ENST00000539982 C6orf226Q5I0X4 101 aa6.68□□□□□ -1.34
CLSTN3-209ENST00000539982 PRO1933Q9H354 126 aa6.68□□□□□ -1.34
CLSTN3-209ENST00000539982 IGKV2D-26A0A0A0MRZ7 120 aa6.67□□□□□ -1.34
CLSTN3-209ENST00000539982 RPL37AP8A6NKH3 93 aa6.67□□□□□ -1.34
CLSTN3-209ENST00000539982 NMUP48645 174 aa6.67□□□□□ -1.34
CLSTN3-209ENST00000539982 LINC00167Q96N53 147 aa6.67□□□□□ -1.34
CLSTN3-209ENST00000539982 LEPROTO15243 131 aa6.66□□□□□ -1.34
CLSTN3-209ENST00000539982 SPINK8P0C7L1 97 aa6.66□□□□□ -1.34
CLSTN3-209ENST00000539982 COX8AP10176 69 aa6.66□□□□□ -1.34
CLSTN3-209ENST00000539982 KRTAP13-1Q8IUC0 172 aa6.66□□□□□ -1.34
CLSTN3-209ENST00000539982 PLEKHB2Q96CS7 222 aa6.66□□□□□ -1.34
CLSTN3-209ENST00000539982 C14orf144Q96I85 54 aa6.66□□□□□ -1.34
CLSTN3-209ENST00000539982 TOMM7Q9P0U1 55 aa6.66□□□□□ -1.34
CLSTN3-209ENST00000539982 SMIM1B2RUZ4 78 aa6.65□□□□□ -1.34
CLSTN3-209ENST00000539982 UBE2AP49459 152 aa6.65□□□□□ -1.34
CLSTN3-209ENST00000539982 ASB16-AS1Q495Z4 193 aa6.65□□□□□ -1.34
CLSTN3-209ENST00000539982 Q8IZM0 81 aa6.65□□□□□ -1.34
CLSTN3-209ENST00000539982 MIEN1Q9BRT3 115 aa6.65□□□□□ -1.34
CLSTN3-209ENST00000539982 UQCR10Q9UDW1 63 aa6.65□□□□□ -1.34
CLSTN3-209ENST00000539982 J3QQQ9 107 aa6.64□□□□□ -1.35
CLSTN3-209ENST00000539982 DLEU1O43261 78 aa6.64□□□□□ -1.35
CLSTN3-209ENST00000539982 LGALS3P17931 250 aaKnown RBP6.64□□□□□ -1.35
CLSTN3-209ENST00000539982 SLC25A34Q6PIV7 304 aa6.64□□□□□ -1.35
CLSTN3-209ENST00000539982 PCP2Q8IVA1 136 aa6.64□□□□□ -1.35
CLSTN3-209ENST00000539982 LINC00337Q8N6G1 96 aa6.64□□□□□ -1.35
CLSTN3-209ENST00000539982 IGLV5-39A0A0G2JS06 123 aa6.63□□□□□ -1.35
CLSTN3-209ENST00000539982 TSPEAR-AS2P59090 65 aa6.63□□□□□ -1.35
CLSTN3-209ENST00000539982 BOD1L2Q8IYS8 172 aa6.63□□□□□ -1.35
CLSTN3-209ENST00000539982 MYMXA0A1B0GTQ4 84 aa6.62□□□□□ -1.35
CLSTN3-209ENST00000539982 GAGE10A6NGK3 116 aa6.62□□□□□ -1.35
CLSTN3-209ENST00000539982 PCP4L1A6NKN8 68 aa6.62□□□□□ -1.35
CLSTN3-209ENST00000539982 ZNF815PA8K554 130 aa6.62□□□□□ -1.35
CLSTN3-209ENST00000539982 FP248Q71RG6 208 aaPredicted RBP6.62□□□□□ -1.35
CLSTN3-209ENST00000539982 KRTAP4-1Q9BYQ7 146 aa6.62□□□□□ -1.35
CLSTN3-209ENST00000539982 TTTY13Q9BZ97 58 aa6.62□□□□□ -1.35
CLSTN3-209ENST00000539982 DDTP30046 118 aa6.61□□□□□ -1.35
CLSTN3-209ENST00000539982 SPAG11AQ6PDA7 123 aa6.61□□□□□ -1.35
CLSTN3-209ENST00000539982 IGLV5-37A0A075B6J1 123 aa6.6□□□□□ -1.35
CLSTN3-209ENST00000539982 KRTAP13-3Q3SY46 172 aa6.6□□□□□ -1.35
CLSTN3-209ENST00000539982 COX7B2Q8TF08 81 aa6.6□□□□□ -1.35
CLSTN3-209ENST00000539982 NDUFA12Q9UI09 145 aa6.6□□□□□ -1.35
CLSTN3-209ENST00000539982 CXCL5P42830 114 aa6.59□□□□□ -1.35
CLSTN3-209ENST00000539982 SEC61BP60468 96 aaKnown RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms