RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 FAM236AA0A1B0GUQ0 79 aa10.22□□□□□ -0.77
DDB1-216ENST00000539739 FAM236BA0A1B0GV22 79 aa10.22□□□□□ -0.77
DDB1-216ENST00000539739 COX7A2LO14548 114 aa10.22□□□□□ -0.77
DDB1-216ENST00000539739 LINC00643Q86TS7 51 aa10.22□□□□□ -0.77
DDB1-216ENST00000539739 PRO1854Q9UHT4 67 aa10.22□□□□□ -0.77
DDB1-216ENST00000539739 IGHV3OR16-9A0A0B4J2B5 98 aa10.21□□□□□ -0.78
DDB1-216ENST00000539739 DNAH2Q9P225 4427 aa10.21□□□□□ -0.78
DDB1-216ENST00000539739 F8VRH5 84 aa10.2□□□□□ -0.78
DDB1-216ENST00000539739 COX6A2Q02221 97 aa10.2□□□□□ -0.78
DDB1-216ENST00000539739 TNP2Q05952 138 aa10.2□□□□□ -0.78
DDB1-216ENST00000539739 LINC01620Q4KN68 170 aa10.2□□□□□ -0.78
DDB1-216ENST00000539739 C5orf38Q86SI9 138 aa10.2□□□□□ -0.78
DDB1-216ENST00000539739 TTTY13Q9BZ97 58 aa10.2□□□□□ -0.78
DDB1-216ENST00000539739 V9GYY9 64 aa10.2□□□□□ -0.78
DDB1-216ENST00000539739 C14orf177Q52M58 125 aa10.19□□□□□ -0.78
DDB1-216ENST00000539739 Q5XG85 94 aa10.19□□□□□ -0.78
DDB1-216ENST00000539739 A0A087WTM6 91 aa10.18□□□□□ -0.78
DDB1-216ENST00000539739 A0A0B4J2C4 111 aa10.18□□□□□ -0.78
DDB1-216ENST00000539739 LRCOL1A6NCL2 159 aa10.18□□□□□ -0.78
DDB1-216ENST00000539739 USP17L23D6RBM5 183 aa10.18□□□□□ -0.78
DDB1-216ENST00000539739 LECT2O14960 151 aa10.18□□□□□ -0.78
DDB1-216ENST00000539739 SRSF9Q13242 221 aaKnown RBP eCLIP10.18□□□□□ -0.78
DDB1-216ENST00000539739 A0A087WZ39 114 aa10.18□□□□□ -0.78
DDB1-216ENST00000539739 IGHV1-58A0A0C4DH39 117 aa10.18□□□□□ -0.78
DDB1-216ENST00000539739 MRPL35Q9NZE8 188 aaKnown RBP10.18□□□□□ -0.78
DDB1-216ENST00000539739 DNAH10Q8IVF4 4471 aa10.17□□□□□ -0.78
DDB1-216ENST00000539739 IGLV4-69A0A075B6H9 119 aa10.17□□□□□ -0.78
DDB1-216ENST00000539739 LINC01561Q8N1V8 128 aa10.17□□□□□ -0.78
DDB1-216ENST00000539739 PLEKHB2Q96CS7 222 aa10.17□□□□□ -0.78
DDB1-216ENST00000539739 CDKN2A-AS1Q9UH64 79 aa10.17□□□□□ -0.78
DDB1-216ENST00000539739 IGLV5-45A0A087WSX0 123 aa10.16□□□□□ -0.78
DDB1-216ENST00000539739 FRAS1Q86XX4 4008 aa10.16□□□□□ -0.78
DDB1-216ENST00000539739 HIST1H4AP62805 103 aaKnown RBP10.15□□□□□ -0.78
DDB1-216ENST00000539739 C2orf48Q96LS8 159 aa10.15□□□□□ -0.78
DDB1-216ENST00000539739 RYR3Q15413 4870 aa10.15□□□□□ -0.79
DDB1-216ENST00000539739 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.15□□□□□ -0.79
DDB1-216ENST00000539739 TRBV30A0A0K0K1B3 111 aa10.15□□□□□ -0.79
DDB1-216ENST00000539739 C11orf86A6NJI1 115 aa10.15□□□□□ -0.79
DDB1-216ENST00000539739 Q8N814 137 aa10.15□□□□□ -0.79
DDB1-216ENST00000539739 C15orf56Q8N910 161 aa10.15□□□□□ -0.79
DDB1-216ENST00000539739 ZNF22P17026 224 aaPredicted RBP10.14□□□□□ -0.79
DDB1-216ENST00000539739 HRCT1Q6UXD1 115 aa10.14□□□□□ -0.79
DDB1-216ENST00000539739 SCGB1D4Q6XE38 83 aa10.14□□□□□ -0.79
DDB1-216ENST00000539739 SDIM1Q6ZPB5 146 aa10.14□□□□□ -0.79
DDB1-216ENST00000539739 IGHV3-64A0A075B6Q5 118 aa10.13□□□□□ -0.79
DDB1-216ENST00000539739 ZNF815PA8K554 130 aa10.13□□□□□ -0.79
DDB1-216ENST00000539739 ZNF561-AS1K7EIQ3 104 aa10.13□□□□□ -0.79
DDB1-216ENST00000539739 CFC1BP0CG36 223 aa10.13□□□□□ -0.79
DDB1-216ENST00000539739 CFC1P0CG37 223 aa10.13□□□□□ -0.79
DDB1-216ENST00000539739 HERVK_113P61574 105 aa10.13□□□□□ -0.79
DDB1-216ENST00000539739 DNAH17Q9UFH2 4485 aa10.12□□□□□ -0.79
DDB1-216ENST00000539739 HIGD2BQ4VC39 106 aa10.12□□□□□ -0.79
DDB1-216ENST00000539739 GVQW2A0A096LPI5 108 aaPredicted RBP10.11□□□□□ -0.79
DDB1-216ENST00000539739 C4orf26Q17RF5 130 aa10.11□□□□□ -0.79
DDB1-216ENST00000539739 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.11□□□□□ -0.79
DDB1-216ENST00000539739 SPAG11BQ08648 103 aa10.11□□□□□ -0.79
DDB1-216ENST00000539739 C2orf82Q6UX34 121 aa10.11□□□□□ -0.79
DDB1-216ENST00000539739 SMIM1B2RUZ4 78 aa10.1□□□□□ -0.79
DDB1-216ENST00000539739 PRSS2P07478 247 aa10.1□□□□□ -0.79
DDB1-216ENST00000539739 TEX49A0A1B0GTD5 131 aa10.09□□□□□ -0.79
DDB1-216ENST00000539739 NDUFC2O95298 119 aa10.09□□□□□ -0.79
DDB1-216ENST00000539739 COPS9Q8WXC6 57 aa10.09□□□□□ -0.79
DDB1-216ENST00000539739 TOMM7Q9P0U1 55 aa10.09□□□□□ -0.79
DDB1-216ENST00000539739 EPM2AB3EWF7 344 aa10.08□□□□□ -0.8
DDB1-216ENST00000539739 COX6CP09669 75 aa10.08□□□□□ -0.8
DDB1-216ENST00000539739 FAT2Q9NYQ8 4349 aa10.08□□□□□ -0.8
DDB1-216ENST00000539739 C6orf226Q5I0X4 101 aa10.07□□□□□ -0.8
DDB1-216ENST00000539739 Q8IZM0 81 aa10.07□□□□□ -0.8
DDB1-216ENST00000539739 SERP2Q8N6R1 65 aa10.07□□□□□ -0.8
DDB1-216ENST00000539739 TMEM223A0PJW6 202 aa10.07□□□□□ -0.8
DDB1-216ENST00000539739 J3QQQ9 107 aa10.07□□□□□ -0.8
DDB1-216ENST00000539739 PFN2P35080 140 aa10.07□□□□□ -0.8
DDB1-216ENST00000539739 IGLV5-52A0A0A0MRZ9 124 aa10.06□□□□□ -0.8
DDB1-216ENST00000539739 IGLV5-39A0A0G2JS06 123 aa10.06□□□□□ -0.8
DDB1-216ENST00000539739 A0A1B0GVY2 172 aa10.06□□□□□ -0.8
DDB1-216ENST00000539739 CNBPP62633 177 aaKnown RBP10.06□□□□□ -0.8
DDB1-216ENST00000539739 COX7B2Q8TF08 81 aa10.06□□□□□ -0.8
DDB1-216ENST00000539739 CAMK2N2Q96S95 79 aa10.06□□□□□ -0.8
DDB1-216ENST00000539739 KRTAP10-2P60368 255 aa10.05□□□□□ -0.8
DDB1-216ENST00000539739 KIAA0087Q14695 138 aa10.05□□□□□ -0.8
DDB1-216ENST00000539739 NDUFA1O15239 70 aa10.04□□□□□ -0.8
DDB1-216ENST00000539739 RPL18AQ02543 176 aaKnown RBP10.04□□□□□ -0.8
DDB1-216ENST00000539739 SYCNQ0VAF6 134 aa10.04□□□□□ -0.8
DDB1-216ENST00000539739 hADV29S1A0JD25 119 aa10.04□□□□□ -0.8
DDB1-216ENST00000539739 SLPIP03973 132 aa10.03□□□□□ -0.8
DDB1-216ENST00000539739 C1orf195Q5TG92 126 aa10.03□□□□□ -0.8
DDB1-216ENST00000539739 DAND5Q8N907 189 aa10.03□□□□□ -0.8
DDB1-216ENST00000539739 SERP1Q9Y6X1 66 aa10.03□□□□□ -0.8
DDB1-216ENST00000539739 FUSP35637 526 aaKnown RBP eCLIP10.02□□□□□ -0.81
DDB1-216ENST00000539739 NPC2P61916 151 aa10.01□□□□□ -0.81
DDB1-216ENST00000539739 SFTA2Q6UW10 78 aa10.01□□□□□ -0.81
DDB1-216ENST00000539739 Q6ZRU5 148 aa10.01□□□□□ -0.81
DDB1-216ENST00000539739 LEPROTO15243 131 aa10□□□□□ -0.81
DDB1-216ENST00000539739 UNQ6190/PRO20217Q6UXQ8 127 aa10□□□□□ -0.81
DDB1-216ENST00000539739 C9orf163Q8N9P6 203 aa10□□□□□ -0.81
DDB1-216ENST00000539739 OXTP01178 125 aa10□□□□□ -0.81
DDB1-216ENST00000539739 C16orf90A8MZG2 172 aa9.99□□□□□ -0.81
DDB1-216ENST00000539739 LST1O00453 97 aa9.98□□□□□ -0.81
DDB1-216ENST00000539739 C10orf25Q5T742 122 aa9.98□□□□□ -0.81
DDB1-216ENST00000539739 PKIGQ9Y2B9 76 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms