RNA–Protein interactions for RNA: ENST00000539232.1

LMO3-220, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-220ENST00000539232 FAM30AQ9NZY2 134 aa4.78□□□□□ -1.64
LMO3-220ENST00000539232 KLK12Q9UKR0 248 aa4.78□□□□□ -1.64
LMO3-220ENST00000539232 TRBV6-8A0A0A6YYG3 113 aa4.77□□□□□ -1.65
LMO3-220ENST00000539232 TRBV10-1A0A0K0K1A3 114 aa4.77□□□□□ -1.65
LMO3-220ENST00000539232 NDUFC2-KCTD14E9PQ53 114 aa4.77□□□□□ -1.65
LMO3-220ENST00000539232 LEPROTO15243 131 aa4.77□□□□□ -1.65
LMO3-220ENST00000539232 SUMO2P61956 95 aaKnown RBP4.77□□□□□ -1.65
LMO3-220ENST00000539232 RPL36AP83881 106 aaKnown RBP4.77□□□□□ -1.65
LMO3-220ENST00000539232 GAGE2AQ6NT46 116 aa4.77□□□□□ -1.65
LMO3-220ENST00000539232 ENHOQ6UWT2 76 aa4.77□□□□□ -1.65
LMO3-220ENST00000539232 FAM19A5Q7Z5A7 132 aaPredicted RBP4.77□□□□□ -1.65
LMO3-220ENST00000539232 C5orf38Q86SI9 138 aa4.77□□□□□ -1.65
LMO3-220ENST00000539232 RPL36ALQ969Q0 106 aaKnown RBP4.77□□□□□ -1.65
LMO3-220ENST00000539232 RPL39LQ96EH5 51 aaKnown RBP4.77□□□□□ -1.65
LMO3-220ENST00000539232 DNAH8Q96JB1 4490 aa4.76□□□□□ -1.65
LMO3-220ENST00000539232 TRACP01848 142 aa4.76□□□□□ -1.65
LMO3-220ENST00000539232 LGALS3P17931 250 aaKnown RBP4.76□□□□□ -1.65
LMO3-220ENST00000539232 C2orf66Q6UXQ4 117 aa4.76□□□□□ -1.65
LMO3-220ENST00000539232 COPS9Q8WXC6 57 aa4.76□□□□□ -1.65
LMO3-220ENST00000539232 DPH3P1Q9H4G8 78 aa4.76□□□□□ -1.65
LMO3-220ENST00000539232 A0A0J9YXY3 114 aa4.75□□□□□ -1.65
LMO3-220ENST00000539232 TEX49A0A1B0GTD5 131 aa4.75□□□□□ -1.65
LMO3-220ENST00000539232 FAM236AA0A1B0GUQ0 79 aa4.75□□□□□ -1.65
LMO3-220ENST00000539232 FAM236BA0A1B0GV22 79 aa4.75□□□□□ -1.65
LMO3-220ENST00000539232 A4D1N5 150 aa4.75□□□□□ -1.65
LMO3-220ENST00000539232 J3QQQ9 107 aa4.75□□□□□ -1.65
LMO3-220ENST00000539232 LST1O00453 97 aa4.75□□□□□ -1.65
LMO3-220ENST00000539232 HIST1H4AP62805 103 aaKnown RBP4.75□□□□□ -1.65
LMO3-220ENST00000539232 KRTAP26-1Q6PEX3 210 aa4.75□□□□□ -1.65
LMO3-220ENST00000539232 CLPSL2Q6UWE3 100 aa4.75□□□□□ -1.65
LMO3-220ENST00000539232 Q8N814 137 aa4.75□□□□□ -1.65
LMO3-220ENST00000539232 DAND5Q8N907 189 aa4.75□□□□□ -1.65
LMO3-220ENST00000539232 CHCHD5Q9BSY4 110 aa4.75□□□□□ -1.65
LMO3-220ENST00000539232 IGLV4-60A0A075B6I1 120 aa4.74□□□□□ -1.65
LMO3-220ENST00000539232 TMEM223A0PJW6 202 aa4.74□□□□□ -1.65
LMO3-220ENST00000539232 FAM229AH3BQW9 127 aa4.74□□□□□ -1.65
LMO3-220ENST00000539232 H7C423 109 aa4.74□□□□□ -1.65
LMO3-220ENST00000539232 PSCAO43653 123 aa4.74□□□□□ -1.65
LMO3-220ENST00000539232 TIMM17BO60830 172 aa4.74□□□□□ -1.65
LMO3-220ENST00000539232 SMR3BP02814 79 aaPredicted RBP4.74□□□□□ -1.65
LMO3-220ENST00000539232 Q1RN00 199 aa4.74□□□□□ -1.65
LMO3-220ENST00000539232 IGLV4-69A0A075B6H9 119 aa4.73□□□□□ -1.65
LMO3-220ENST00000539232 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.73□□□□□ -1.65
LMO3-220ENST00000539232 IGKV2D-24A0A075B6R9 120 aa4.73□□□□□ -1.65
LMO3-220ENST00000539232 IGLV5-52A0A0A0MRZ9 124 aa4.73□□□□□ -1.65
LMO3-220ENST00000539232 IGIPA6NJ69 53 aa4.73□□□□□ -1.65
LMO3-220ENST00000539232 F8WDY8 70 aa4.73□□□□□ -1.65
LMO3-220ENST00000539232 C20orf203Q8NBC4 194 aa4.73□□□□□ -1.65
LMO3-220ENST00000539232 AMELXQ99217 191 aa4.73□□□□□ -1.65
LMO3-220ENST00000539232 TRAV8-3A0A0A6YYJ7 113 aa4.72□□□□□ -1.65
LMO3-220ENST00000539232 TRBV6-5A0A0K0K1A5 114 aa4.72□□□□□ -1.65
LMO3-220ENST00000539232 VCYO14598 125 aa4.72□□□□□ -1.65
LMO3-220ENST00000539232 TRIAP1O43715 76 aa4.72□□□□□ -1.65
LMO3-220ENST00000539232 ANGP03950 147 aaKnown RBP4.72□□□□□ -1.65
LMO3-220ENST00000539232 LINC00269Q8N2A0 174 aa4.72□□□□□ -1.65
LMO3-220ENST00000539232 IGLV10-54A0A075B6I4 117 aa4.71□□□□□ -1.66
LMO3-220ENST00000539232 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.71□□□□□ -1.66
LMO3-220ENST00000539232 IGKV2-29A2NJV5 120 aaPredicted RBP4.71□□□□□ -1.66
LMO3-220ENST00000539232 BCE1O60756 84 aa4.71□□□□□ -1.66
LMO3-220ENST00000539232 NDUFC2O95298 119 aa4.71□□□□□ -1.66
LMO3-220ENST00000539232 ZNF22P17026 224 aaPredicted RBP4.71□□□□□ -1.66
LMO3-220ENST00000539232 MUSTN1Q8IVN3 82 aa4.71□□□□□ -1.66
LMO3-220ENST00000539232 DPH3Q96FX2 82 aa4.71□□□□□ -1.66
LMO3-220ENST00000539232 C2orf48Q96LS8 159 aa4.71□□□□□ -1.66
LMO3-220ENST00000539232 PRR34Q9NV39 138 aa4.71□□□□□ -1.66
LMO3-220ENST00000539232 USP17L23D6RBM5 183 aa4.7□□□□□ -1.66
LMO3-220ENST00000539232 TSHBP01222 138 aa4.7□□□□□ -1.66
LMO3-220ENST00000539232 RPL18AQ02543 176 aaKnown RBP4.7□□□□□ -1.66
LMO3-220ENST00000539232 SFTA2Q6UW10 78 aa4.7□□□□□ -1.66
LMO3-220ENST00000539232 SERP2Q8N6R1 65 aa4.7□□□□□ -1.66
LMO3-220ENST00000539232 TMEM243Q9BU79 118 aa4.7□□□□□ -1.66
LMO3-220ENST00000539232 CHCHD7Q9BUK0 85 aa4.7□□□□□ -1.66
LMO3-220ENST00000539232 TRBV27A0A0K0K1C4 114 aa4.69□□□□□ -1.66
LMO3-220ENST00000539232 PANO1I0J062 215 aa4.69□□□□□ -1.66
LMO3-220ENST00000539232 SLPIP03973 132 aa4.69□□□□□ -1.66
LMO3-220ENST00000539232 MALP21145 153 aa4.69□□□□□ -1.66
LMO3-220ENST00000539232 POLR2KP53803 58 aaKnown RBP4.69□□□□□ -1.66
LMO3-220ENST00000539232 MRPS36P82909 103 aaKnown RBP4.69□□□□□ -1.66
LMO3-220ENST00000539232 MIAQ16674 131 aa4.69□□□□□ -1.66
LMO3-220ENST00000539232 Q6ZSA8 131 aa4.69□□□□□ -1.66
LMO3-220ENST00000539232 PRO0628Q9UI54 55 aa4.69□□□□□ -1.66
LMO3-220ENST00000539232 LRP2P98164 4655 aa4.69□□□□□ -1.66
LMO3-220ENST00000539232 IGKV3OR2-268A0A0C4DH90 116 aa4.68□□□□□ -1.66
LMO3-220ENST00000539232 LOC107984640A0A0U1RRK4 108 aa4.68□□□□□ -1.66
LMO3-220ENST00000539232 COX7A2LO14548 114 aa4.68□□□□□ -1.66
LMO3-220ENST00000539232 TSPEAR-AS2P59090 65 aa4.68□□□□□ -1.66
LMO3-220ENST00000539232 REG3AQ06141 175 aa4.68□□□□□ -1.66
LMO3-220ENST00000539232 ATP5EP2Q5VTU8 51 aa4.68□□□□□ -1.66
LMO3-220ENST00000539232 Q6JHZ5 121 aa4.68□□□□□ -1.66
LMO3-220ENST00000539232 TIMM21Q9BVV7 248 aa4.68□□□□□ -1.66
LMO3-220ENST00000539232 C1orf43Q9BWL3 253 aa4.68□□□□□ -1.66
LMO3-220ENST00000539232 PYGO1Q9Y3Y4 419 aa4.68□□□□□ -1.66
LMO3-220ENST00000539232 TRAV13-1A0A0B4J241 112 aa4.67□□□□□ -1.66
LMO3-220ENST00000539232 EIF4EBP3O60516 100 aaPredicted RBP4.67□□□□□ -1.66
LMO3-220ENST00000539232 S100A7L2Q5SY68 101 aa4.67□□□□□ -1.66
LMO3-220ENST00000539232 RMI2Q96E14 147 aa4.67□□□□□ -1.66
LMO3-220ENST00000539232 A0A1B0GUV1 79 aa4.66□□□□□ -1.66
LMO3-220ENST00000539232 I3L3M4 83 aa4.66□□□□□ -1.66
LMO3-220ENST00000539232 OXTP01178 125 aa4.66□□□□□ -1.66
LMO3-220ENST00000539232 CRPP02741 224 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms