RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 PET117Q6UWS5 81 aa8.15□□□□□ -1.1
SMARCA4-206ENST00000538456 IFI27L1Q96BM0 104 aa8.15□□□□□ -1.1
SMARCA4-206ENST00000538456 SCGB1D1O95968 90 aa8.14□□□□□ -1.11
SMARCA4-206ENST00000538456 LINC01561Q8N1V8 128 aa8.14□□□□□ -1.11
SMARCA4-206ENST00000538456 LINC00304Q8N9R0 145 aa8.14□□□□□ -1.11
SMARCA4-206ENST00000538456 C12orf57Q99622 126 aa8.14□□□□□ -1.11
SMARCA4-206ENST00000538456 C2orf88Q9BSF0 95 aa8.14□□□□□ -1.11
SMARCA4-206ENST00000538456 C20orf202A1L168 122 aa8.13□□□□□ -1.11
SMARCA4-206ENST00000538456 GAGE10A6NGK3 116 aa8.13□□□□□ -1.11
SMARCA4-206ENST00000538456 TPRXLQ17RH7 258 aa8.13□□□□□ -1.11
SMARCA4-206ENST00000538456 Q6ZN92 141 aa8.13□□□□□ -1.11
SMARCA4-206ENST00000538456 ERASQ7Z444 233 aa8.13□□□□□ -1.11
SMARCA4-206ENST00000538456 Q8IZM0 81 aa8.13□□□□□ -1.11
SMARCA4-206ENST00000538456 SCGB3A1Q96QR1 104 aa8.13□□□□□ -1.11
SMARCA4-206ENST00000538456 TIMM17AQ99595 171 aa8.13□□□□□ -1.11
SMARCA4-206ENST00000538456 TP73-AS1Q9UF72 201 aa8.13□□□□□ -1.11
SMARCA4-206ENST00000538456 IGLV7-46A0A075B6I9 117 aa8.12□□□□□ -1.11
SMARCA4-206ENST00000538456 LINC01545Q5VT33 79 aa8.12□□□□□ -1.11
SMARCA4-206ENST00000538456 IGIPA6NJ69 53 aa8.11□□□□□ -1.11
SMARCA4-206ENST00000538456 NPSP0C0P6 89 aa8.11□□□□□ -1.11
SMARCA4-206ENST00000538456 UBE2AP49459 152 aa8.11□□□□□ -1.11
SMARCA4-206ENST00000538456 LINC00167Q96N53 147 aa8.11□□□□□ -1.11
SMARCA4-206ENST00000538456 F8VRH5 84 aa8.1□□□□□ -1.11
SMARCA4-206ENST00000538456 VCX2Q9H322 139 aa8.1□□□□□ -1.11
SMARCA4-206ENST00000538456 TRAV12-1A0A0B4J245 112 aa8.09□□□□□ -1.11
SMARCA4-206ENST00000538456 H0Y8G0 127 aa8.09□□□□□ -1.11
SMARCA4-206ENST00000538456 AMELXQ99217 191 aa8.09□□□□□ -1.11
SMARCA4-206ENST00000538456 IGKV2D-26A0A0A0MRZ7 120 aa8.08□□□□□ -1.12
SMARCA4-206ENST00000538456 S100A12P80511 92 aa8.08□□□□□ -1.12
SMARCA4-206ENST00000538456 FAM229BQ4G0N7 80 aa8.08□□□□□ -1.12
SMARCA4-206ENST00000538456 PAPPA-AS1Q5QFB9 102 aa8.08□□□□□ -1.12
SMARCA4-206ENST00000538456 KRTAP13-1Q8IUC0 172 aa8.08□□□□□ -1.12
SMARCA4-206ENST00000538456 CDKN2A-AS1Q9UH64 79 aa8.08□□□□□ -1.12
SMARCA4-206ENST00000538456 HERVK_113P63121 156 aa8.06□□□□□ -1.12
SMARCA4-206ENST00000538456 PMVKQ15126 192 aa8.06□□□□□ -1.12
SMARCA4-206ENST00000538456 VAMP8Q9BV40 100 aa8.06□□□□□ -1.12
SMARCA4-206ENST00000538456 PPDPFQ9H3Y8 114 aa8.06□□□□□ -1.12
SMARCA4-206ENST00000538456 IGKV2-28A0A075B6P5 120 aa8.05□□□□□ -1.12
SMARCA4-206ENST00000538456 IGKV2D-28P01615 120 aa8.05□□□□□ -1.12
SMARCA4-206ENST00000538456 FAM19A3Q7Z5A8 133 aa8.05□□□□□ -1.12
SMARCA4-206ENST00000538456 NKAPP1Q8N9T2 125 aa8.05□□□□□ -1.12
SMARCA4-206ENST00000538456 GEMIN7Q9H840 131 aaKnown RBP8.05□□□□□ -1.12
SMARCA4-206ENST00000538456 DPM2O94777 84 aa8.04□□□□□ -1.12
SMARCA4-206ENST00000538456 PLNP26678 52 aa8.04□□□□□ -1.12
SMARCA4-206ENST00000538456 CXCL5P42830 114 aa8.04□□□□□ -1.12
SMARCA4-206ENST00000538456 PRLHP81277 87 aa8.04□□□□□ -1.12
SMARCA4-206ENST00000538456 ATOH7Q8N100 152 aa8.04□□□□□ -1.12
SMARCA4-206ENST00000538456 PMCHL2Q9BQD1 86 aa8.04□□□□□ -1.12
SMARCA4-206ENST00000538456 CST9LQ9H4G1 147 aa8.04□□□□□ -1.12
SMARCA4-206ENST00000538456 CHTOPQ9Y3Y2 248 aaKnown RBP8.04□□□□□ -1.12
SMARCA4-206ENST00000538456 IGKCP01834 107 aa8.03□□□□□ -1.12
SMARCA4-206ENST00000538456 SEC11AP67812 179 aa8.02□□□□□ -1.13
SMARCA4-206ENST00000538456 PAM16Q9Y3D7 125 aa8.02□□□□□ -1.13
SMARCA4-206ENST00000538456 IGLV5-37A0A075B6J1 123 aa8.01□□□□□ -1.13
SMARCA4-206ENST00000538456 SMIM1B2RUZ4 78 aa8.01□□□□□ -1.13
SMARCA4-206ENST00000538456 HSBP1L1C9JCN9 74 aa8.01□□□□□ -1.13
SMARCA4-206ENST00000538456 LINC01547P58512 204 aaPredicted RBP8.01□□□□□ -1.13
SMARCA4-206ENST00000538456 SPATA45Q537H7 98 aa8.01□□□□□ -1.13
SMARCA4-206ENST00000538456 C3orf22Q8N5N4 141 aa8.01□□□□□ -1.13
SMARCA4-206ENST00000538456 COX7B2Q8TF08 81 aa8.01□□□□□ -1.13
SMARCA4-206ENST00000538456 FAM19A1Q7Z5A9 133 aa8□□□□□ -1.13
SMARCA4-206ENST00000538456 TMEM238C9JI98 176 aa7.99□□□□□ -1.13
SMARCA4-206ENST00000538456 TSTD3H0UI37 97 aa7.99□□□□□ -1.13
SMARCA4-206ENST00000538456 IGLC3P0DOY3 106 aa7.99□□□□□ -1.13
SMARCA4-206ENST00000538456 LCE2DQ5TA82 110 aaPredicted RBP7.99□□□□□ -1.13
SMARCA4-206ENST00000538456 C11orf86A6NJI1 115 aa7.98□□□□□ -1.13
SMARCA4-206ENST00000538456 LINC00337Q8N6G1 96 aa7.98□□□□□ -1.13
SMARCA4-206ENST00000538456 CRCT1Q9UGL9 99 aa7.98□□□□□ -1.13
SMARCA4-206ENST00000538456 SPINK8P0C7L1 97 aa7.97□□□□□ -1.13
SMARCA4-206ENST00000538456 CTAG1AP78358 180 aa7.97□□□□□ -1.13
SMARCA4-206ENST00000538456 TMEM126AQ9H061 195 aa7.97□□□□□ -1.13
SMARCA4-206ENST00000538456 TINCRA0A1B0GVN0 87 aa7.96□□□□□ -1.14
SMARCA4-206ENST00000538456 ANKRD39Q53RE8 183 aa7.96□□□□□ -1.14
SMARCA4-206ENST00000538456 PLEKHB2Q96CS7 222 aa7.96□□□□□ -1.14
SMARCA4-206ENST00000538456 PRO1933Q9H354 126 aa7.96□□□□□ -1.14
SMARCA4-206ENST00000538456 ZNF22P17026 224 aaPredicted RBP7.95□□□□□ -1.14
SMARCA4-206ENST00000538456 PFN2P35080 140 aa7.95□□□□□ -1.14
SMARCA4-206ENST00000538456 HERVK_113P61574 105 aa7.95□□□□□ -1.14
SMARCA4-206ENST00000538456 KRTAP13-3Q3SY46 172 aa7.95□□□□□ -1.14
SMARCA4-206ENST00000538456 ASB16-AS1Q495Z4 193 aa7.95□□□□□ -1.14
SMARCA4-206ENST00000538456 FP248Q71RG6 208 aaPredicted RBP7.95□□□□□ -1.14
SMARCA4-206ENST00000538456 KRTAP4-1Q9BYQ7 146 aa7.95□□□□□ -1.14
SMARCA4-206ENST00000538456 TMEM170BQ5T4T1 132 aa7.94□□□□□ -1.14
SMARCA4-206ENST00000538456 HIGD2AQ9BW72 106 aa7.94□□□□□ -1.14
SMARCA4-206ENST00000538456 IGLV5-45A0A087WSX0 123 aa7.93□□□□□ -1.14
SMARCA4-206ENST00000538456 E9PLD3 99 aa7.93□□□□□ -1.14
SMARCA4-206ENST00000538456 M0R378 163 aa7.93□□□□□ -1.14
SMARCA4-206ENST00000538456 VPREB1P12018 145 aa7.93□□□□□ -1.14
SMARCA4-206ENST00000538456 SPAG11AQ6PDA7 123 aa7.93□□□□□ -1.14
SMARCA4-206ENST00000538456 UQCR10Q9UDW1 63 aa7.93□□□□□ -1.14
SMARCA4-206ENST00000538456 COX8AP10176 69 aa7.92□□□□□ -1.14
SMARCA4-206ENST00000538456 C4orf48Q5BLP8 95 aa7.92□□□□□ -1.14
SMARCA4-206ENST00000538456 MIEN1Q9BRT3 115 aa7.92□□□□□ -1.14
SMARCA4-206ENST00000538456 TMEM223A0PJW6 202 aa7.91□□□□□ -1.14
SMARCA4-206ENST00000538456 PCP4L1A6NKN8 68 aa7.91□□□□□ -1.14
SMARCA4-206ENST00000538456 DLEU1O43261 78 aa7.91□□□□□ -1.14
SMARCA4-206ENST00000538456 NMUP48645 174 aa7.91□□□□□ -1.14
SMARCA4-206ENST00000538456 SLC25A34Q6PIV7 304 aa7.91□□□□□ -1.14
SMARCA4-206ENST00000538456 C14orf144Q96I85 54 aa7.91□□□□□ -1.14
SMARCA4-206ENST00000538456 SND1-IT1Q9HBX3 110 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms