RNA–Protein interactions for RNA: ENST00000538418.1

CD9-207, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-207ENST00000538418 KRTAP10-1P60331 282 aa4.53□□□□□ -1.68
CD9-207ENST00000538418 SS18Q15532 418 aa4.53□□□□□ -1.68
CD9-207ENST00000538418 Q6AWC8 147 aa4.53□□□□□ -1.68
CD9-207ENST00000538418 SDHAF1A6NFY7 115 aa4.52□□□□□ -1.69
CD9-207ENST00000538418 FAM24AA6NFZ4 105 aa4.52□□□□□ -1.69
CD9-207ENST00000538418 IBA57-AS1B1ANH7 110 aa4.52□□□□□ -1.69
CD9-207ENST00000538418 LINC01556Q5JQF7 62 aa4.52□□□□□ -1.69
CD9-207ENST00000538418 NPCDR1Q9BY65 106 aa4.52□□□□□ -1.69
CD9-207ENST00000538418 C17orf112F2Z3M2 114 aa4.51□□□□□ -1.69
CD9-207ENST00000538418 M0R2P5 195 aa4.51□□□□□ -1.69
CD9-207ENST00000538418 FGF7P21781 194 aa4.51□□□□□ -1.69
CD9-207ENST00000538418 FAM74A1Q5RGS3 127 aa4.51□□□□□ -1.69
CD9-207ENST00000538418 LCE1EQ5T753 118 aa4.51□□□□□ -1.69
CD9-207ENST00000538418 HRCT1Q6UXD1 115 aa4.51□□□□□ -1.69
CD9-207ENST00000538418 LINC00299Q6ZSB3 139 aa4.51□□□□□ -1.69
CD9-207ENST00000538418 DEFB104AQ8WTQ1 72 aa4.51□□□□□ -1.69
CD9-207ENST00000538418 FAM167A-AS1Q96KT0 104 aa4.51□□□□□ -1.69
CD9-207ENST00000538418 PRADC1Q9BSG0 188 aa4.51□□□□□ -1.69
CD9-207ENST00000538418 DNAH8Q96JB1 4490 aa4.5□□□□□ -1.69
CD9-207ENST00000538418 A0A087WX48 190 aa4.5□□□□□ -1.69
CD9-207ENST00000538418 TRAV21A0A0B4J279 112 aa4.5□□□□□ -1.69
CD9-207ENST00000538418 UBE2L5PA0A1B0GUS4 154 aa4.5□□□□□ -1.69
CD9-207ENST00000538418 TRBV6-4A0A1B0GX49 114 aa4.5□□□□□ -1.69
CD9-207ENST00000538418 LYRM1O43325 122 aa4.5□□□□□ -1.69
CD9-207ENST00000538418 CXCL1P09341 107 aa4.5□□□□□ -1.69
CD9-207ENST00000538418 PYYP10082 97 aa4.5□□□□□ -1.69
CD9-207ENST00000538418 IL7P13232 177 aa4.5□□□□□ -1.69
CD9-207ENST00000538418 RPS28P62857 69 aaKnown RBP4.5□□□□□ -1.69
CD9-207ENST00000538418 Q8N814 137 aa4.5□□□□□ -1.69
CD9-207ENST00000538418 S100ZQ8WXG8 99 aa4.5□□□□□ -1.69
CD9-207ENST00000538418 C12orf57Q99622 126 aa4.5□□□□□ -1.69
CD9-207ENST00000538418 OTORQ9NRC9 128 aa4.5□□□□□ -1.69
CD9-207ENST00000538418 IGKV2-40A0A087WW87 121 aaPredicted RBP4.49□□□□□ -1.69
CD9-207ENST00000538418 J3KT08 172 aa4.49□□□□□ -1.69
CD9-207ENST00000538418 IGKV2D-40P01614 121 aaPredicted RBP4.49□□□□□ -1.69
CD9-207ENST00000538418 S100PP25815 95 aa4.49□□□□□ -1.69
CD9-207ENST00000538418 LELP1Q5T871 98 aa4.49□□□□□ -1.69
CD9-207ENST00000538418 SOSTDC1Q6X4U4 206 aa4.49□□□□□ -1.69
CD9-207ENST00000538418 Q6ZQT0 140 aa4.49□□□□□ -1.69
CD9-207ENST00000538418 WFDC10BQ8IUB3 73 aa4.49□□□□□ -1.69
CD9-207ENST00000538418 TCEAL7Q9BRU2 100 aa4.49□□□□□ -1.69
CD9-207ENST00000538418 NMES1Q9C002 83 aa4.49□□□□□ -1.69
CD9-207ENST00000538418 A0A087WWC5 75 aa4.48□□□□□ -1.69
CD9-207ENST00000538418 SMR3BP02814 79 aaPredicted RBP4.48□□□□□ -1.69
CD9-207ENST00000538418 S100A8P05109 93 aa4.48□□□□□ -1.69
CD9-207ENST00000538418 PRB4P10163 310 aaPredicted RBP4.48□□□□□ -1.69
CD9-207ENST00000538418 MGST1P10620 155 aaKnown RBP4.48□□□□□ -1.69
CD9-207ENST00000538418 S100A10P60903 97 aa4.48□□□□□ -1.69
CD9-207ENST00000538418 RHOHQ15669 191 aa4.48□□□□□ -1.69
CD9-207ENST00000538418 SPANXCQ9NY87 97 aa4.48□□□□□ -1.69
CD9-207ENST00000538418 SFTA3P0C7M3 94 aa4.47□□□□□ -1.69
CD9-207ENST00000538418 SMIM6P0DI80 62 aa4.47□□□□□ -1.69
CD9-207ENST00000538418 Q6ZSA8 131 aa4.47□□□□□ -1.69
CD9-207ENST00000538418 NHP2Q9NX24 153 aaKnown RBP4.47□□□□□ -1.69
CD9-207ENST00000538418 J3QQQ9 107 aa4.46□□□□□ -1.7
CD9-207ENST00000538418 UBE2L3P68036 154 aaKnown RBP4.46□□□□□ -1.7
CD9-207ENST00000538418 ZNF345Q14585 488 aa4.46□□□□□ -1.7
CD9-207ENST00000538418 CFAP126Q5VTH2 177 aa4.46□□□□□ -1.7
CD9-207ENST00000538418 EIF5AL1Q6IS14 154 aaKnown RBP4.46□□□□□ -1.7
CD9-207ENST00000538418 ATP6V0E2Q8NHE4 81 aa4.46□□□□□ -1.7
CD9-207ENST00000538418 Q8TAT8 98 aa4.46□□□□□ -1.7
CD9-207ENST00000538418 NAT8BQ9UHF3 227 aa4.46□□□□□ -1.7
CD9-207ENST00000538418 A0A1B0GX51 115 aa4.45□□□□□ -1.7
CD9-207ENST00000538418 A8MWV9 139 aa4.45□□□□□ -1.7
CD9-207ENST00000538418 AKR1D1P51857 326 aa4.45□□□□□ -1.7
CD9-207ENST00000538418 ELOBQ15370 118 aa4.45□□□□□ -1.7
CD9-207ENST00000538418 ZC2HC1AQ96GY0 325 aa4.44□□□□□ -1.7
CD9-207ENST00000538418 HYLS1Q96M11 299 aa4.44□□□□□ -1.7
CD9-207ENST00000538418 OR5AC2Q9NZP5 309 aa4.44□□□□□ -1.7
CD9-207ENST00000538418 A0A0G2JQZ4 141 aa4.43□□□□□ -1.7
CD9-207ENST00000538418 Q0VG73 95 aa4.43□□□□□ -1.7
CD9-207ENST00000538418 PHF5AQ7RTV0 110 aaKnown RBP4.43□□□□□ -1.7
CD9-207ENST00000538418 C5orf17Q8NAS9 161 aa4.43□□□□□ -1.7
CD9-207ENST00000538418 PPP1R1CQ8WVI7 109 aa4.43□□□□□ -1.7
CD9-207ENST00000538418 HMCN2Q8NDA2 5059 aa4.43□□□□□ -1.7
CD9-207ENST00000538418 UBR4Q5T4S7 5183 aa4.42□□□□□ -1.7
CD9-207ENST00000538418 LINC00587B1AMM8 73 aa4.42□□□□□ -1.7
CD9-207ENST00000538418 MPC2O95563 127 aa4.42□□□□□ -1.7
CD9-207ENST00000538418 IGHV3-30P01768 117 aa4.42□□□□□ -1.7
CD9-207ENST00000538418 IGHV3-33P01772 117 aa4.42□□□□□ -1.7
CD9-207ENST00000538418 TCRAP04437 139 aa4.42□□□□□ -1.7
CD9-207ENST00000538418 IGHV3-30-5P0DP03 117 aa4.42□□□□□ -1.7
CD9-207ENST00000538418 HBBP68871 147 aa4.42□□□□□ -1.7
CD9-207ENST00000538418 SERF2P84101 59 aa4.42□□□□□ -1.7
CD9-207ENST00000538418 KRTAP13-3Q3SY46 172 aa4.42□□□□□ -1.7
CD9-207ENST00000538418 TIMM21Q9BVV7 248 aa4.42□□□□□ -1.7
CD9-207ENST00000538418 TMEM167BQ9NRX6 74 aa4.42□□□□□ -1.7
CD9-207ENST00000538418 BORCS7-ASMTA0A0B4J1R7 106 aa4.41□□□□□ -1.7
CD9-207ENST00000538418 TRBV10-1A0A0K0K1A3 114 aa4.41□□□□□ -1.7
CD9-207ENST00000538418 RPL35P42766 123 aaKnown RBP4.41□□□□□ -1.7
CD9-207ENST00000538418 PKIAP61925 76 aa4.41□□□□□ -1.7
CD9-207ENST00000538418 PSMG3Q9BT73 122 aaPredicted RBP4.41□□□□□ -1.7
CD9-207ENST00000538418 LRP1Q07954 4544 aaKnown RBP4.41□□□□□ -1.7
CD9-207ENST00000538418 K7ERJ3 54 aa4.4□□□□□ -1.71
CD9-207ENST00000538418 HIST1H2BKO60814 126 aa4.4□□□□□ -1.71
CD9-207ENST00000538418 TIMM17BO60830 172 aa4.4□□□□□ -1.71
CD9-207ENST00000538418 HIST1H2BJP06899 126 aa4.4□□□□□ -1.71
CD9-207ENST00000538418 LINC00694P0DN24 101 aa4.4□□□□□ -1.71
CD9-207ENST00000538418 RNASE3P12724 160 aaKnown RBP4.4□□□□□ -1.71
CD9-207ENST00000538418 TNFSF18Q9UNG2 199 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms