RNA–Protein interactions for RNA: ENST00000538375.5

COPS7A-207, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 898 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-207ENST00000538375 SND1-IT1Q9HBX3 110 aa8.16□□□□□ -1.1
COPS7A-207ENST00000538375 C3orf79P0CE67 100 aa8.15□□□□□ -1.1
COPS7A-207ENST00000538375 LGALS3P17931 250 aaKnown RBP8.15□□□□□ -1.1
COPS7A-207ENST00000538375 KRTAP11-1Q8IUC1 163 aa8.15□□□□□ -1.1
COPS7A-207ENST00000538375 NKAPP1Q8N9T2 125 aa8.15□□□□□ -1.1
COPS7A-207ENST00000538375 LRP1Q07954 4544 aaKnown RBP8.15□□□□□ -1.1
COPS7A-207ENST00000538375 GAGE10A6NGK3 116 aa8.14□□□□□ -1.11
COPS7A-207ENST00000538375 J3QQQ9 107 aa8.14□□□□□ -1.11
COPS7A-207ENST00000538375 SMIM13P0DJ93 91 aa8.14□□□□□ -1.11
COPS7A-207ENST00000538375 HERV-K104P63124 156 aa8.14□□□□□ -1.11
COPS7A-207ENST00000538375 MRPL55Q7Z7F7 128 aaKnown RBP8.14□□□□□ -1.11
COPS7A-207ENST00000538375 UBR4Q5T4S7 5183 aa8.14□□□□□ -1.11
COPS7A-207ENST00000538375 RPL37AP8A6NKH3 93 aa8.13□□□□□ -1.11
COPS7A-207ENST00000538375 KRTAP29-1A8MX34 341 aaPredicted RBP8.13□□□□□ -1.11
COPS7A-207ENST00000538375 LINC00587B1AMM8 73 aa8.13□□□□□ -1.11
COPS7A-207ENST00000538375 TSPEAR-AS2P59090 65 aa8.13□□□□□ -1.11
COPS7A-207ENST00000538375 LINC01545Q5VT33 79 aa8.13□□□□□ -1.11
COPS7A-207ENST00000538375 SPINK6Q6UWN8 80 aa8.13□□□□□ -1.11
COPS7A-207ENST00000538375 PLA2G2DQ9UNK4 145 aa8.13□□□□□ -1.11
COPS7A-207ENST00000538375 FAT3Q8TDW7 4589 aa8.12□□□□□ -1.11
COPS7A-207ENST00000538375 OXTP01178 125 aa8.12□□□□□ -1.11
COPS7A-207ENST00000538375 S100A6P06703 90 aa8.12□□□□□ -1.11
COPS7A-207ENST00000538375 S100A2P29034 98 aa8.12□□□□□ -1.11
COPS7A-207ENST00000538375 RPL24P83731 157 aaKnown RBP8.12□□□□□ -1.11
COPS7A-207ENST00000538375 LINC00167Q96N53 147 aa8.12□□□□□ -1.11
COPS7A-207ENST00000538375 TP73-AS1Q9UF72 201 aa8.12□□□□□ -1.11
COPS7A-207ENST00000538375 IGLV7-43P04211 117 aa8.11□□□□□ -1.11
COPS7A-207ENST00000538375 SRSF9Q13242 221 aaKnown RBP eCLIP8.11□□□□□ -1.11
COPS7A-207ENST00000538375 C20orf202A1L168 122 aa8.1□□□□□ -1.11
COPS7A-207ENST00000538375 E9PLD3 99 aa8.1□□□□□ -1.11
COPS7A-207ENST00000538375 MIR7-3HGQ8N6C7 128 aa8.1□□□□□ -1.11
COPS7A-207ENST00000538375 NMUP48645 174 aa8.09□□□□□ -1.11
COPS7A-207ENST00000538375 REG3GQ6UW15 175 aa8.09□□□□□ -1.11
COPS7A-207ENST00000538375 IGLV5-37A0A075B6J1 123 aa8.08□□□□□ -1.12
COPS7A-207ENST00000538375 VPREB1P12018 145 aa8.08□□□□□ -1.12
COPS7A-207ENST00000538375 BOD1L2Q8IYS8 172 aa8.08□□□□□ -1.12
COPS7A-207ENST00000538375 IGKV2-28A0A075B6P5 120 aa8.07□□□□□ -1.12
COPS7A-207ENST00000538375 IGKV2D-28P01615 120 aa8.07□□□□□ -1.12
COPS7A-207ENST00000538375 HIST3H2BBQ8N257 126 aa8.07□□□□□ -1.12
COPS7A-207ENST00000538375 DAND5Q8N907 189 aa8.07□□□□□ -1.12
COPS7A-207ENST00000538375 ATOH7Q8N100 152 aa8.06□□□□□ -1.12
COPS7A-207ENST00000538375 DIRC1Q969H9 104 aa8.06□□□□□ -1.12
COPS7A-207ENST00000538375 A0A0J9YXY3 114 aa8.05□□□□□ -1.12
COPS7A-207ENST00000538375 SNRPEP62304 92 aaKnown RBP8.05□□□□□ -1.12
COPS7A-207ENST00000538375 Q8NDZ9 215 aa8.05□□□□□ -1.12
COPS7A-207ENST00000538375 HIST1H2BLQ99880 126 aa8.05□□□□□ -1.12
COPS7A-207ENST00000538375 TMEM238LA0A1B0GVL6 79 aa8.04□□□□□ -1.12
COPS7A-207ENST00000538375 BCE1O60756 84 aa8.04□□□□□ -1.12
COPS7A-207ENST00000538375 MIEN1Q9BRT3 115 aa8.04□□□□□ -1.12
COPS7A-207ENST00000538375 PKHD1L1Q86WI1 4243 aa8.03□□□□□ -1.12
COPS7A-207ENST00000538375 IGLV1-50A0A075B6I6 118 aa8.03□□□□□ -1.12
COPS7A-207ENST00000538375 IGKV2D-26A0A0A0MRZ7 120 aa8.03□□□□□ -1.12
COPS7A-207ENST00000538375 ZNF815PA8K554 130 aa8.03□□□□□ -1.12
COPS7A-207ENST00000538375 M0R378 163 aa8.03□□□□□ -1.12
COPS7A-207ENST00000538375 NCR3O14931 201 aa8.03□□□□□ -1.12
COPS7A-207ENST00000538375 ZNF861PO60384 105 aa8.03□□□□□ -1.12
COPS7A-207ENST00000538375 NPC2P61916 151 aa8.03□□□□□ -1.12
COPS7A-207ENST00000538375 H0Y9J4 135 aa8.02□□□□□ -1.13
COPS7A-207ENST00000538375 RPL28P46779 137 aaKnown RBP8.02□□□□□ -1.13
COPS7A-207ENST00000538375 UBE2AP49459 152 aa8.02□□□□□ -1.13
COPS7A-207ENST00000538375 AKR1D1P51857 326 aa8.02□□□□□ -1.13
COPS7A-207ENST00000538375 LINC01600Q96MT4 127 aa8.02□□□□□ -1.13
COPS7A-207ENST00000538375 TMEM238C9JI98 176 aa8.01□□□□□ -1.13
COPS7A-207ENST00000538375 ANKRD39Q53RE8 183 aa8.01□□□□□ -1.13
COPS7A-207ENST00000538375 TTTY13Q9BZ97 58 aa8.01□□□□□ -1.13
COPS7A-207ENST00000538375 ADAMTSL4-AS1Q5T5F5 129 aa8□□□□□ -1.13
COPS7A-207ENST00000538375 FAM19A1Q7Z5A9 133 aa8□□□□□ -1.13
COPS7A-207ENST00000538375 TMEM126AQ9H061 195 aa8□□□□□ -1.13
COPS7A-207ENST00000538375 C5orf52A6NGY3 159 aa7.98□□□□□ -1.13
COPS7A-207ENST00000538375 HSBP1L1C9JCN9 74 aa7.98□□□□□ -1.13
COPS7A-207ENST00000538375 SCGB1D1O95968 90 aa7.98□□□□□ -1.13
COPS7A-207ENST00000538375 MT1HL1P0DM35 61 aa7.98□□□□□ -1.13
COPS7A-207ENST00000538375 SCGB1D4Q6XE38 83 aa7.98□□□□□ -1.13
COPS7A-207ENST00000538375 LOC107984156A0A0G2JMH3 177 aa7.97□□□□□ -1.13
COPS7A-207ENST00000538375 S100A12P80511 92 aa7.97□□□□□ -1.13
COPS7A-207ENST00000538375 PRLHP81277 87 aa7.97□□□□□ -1.13
COPS7A-207ENST00000538375 ARL17AQ8IVW1 177 aa7.97□□□□□ -1.13
COPS7A-207ENST00000538375 S100A7L2Q5SY68 101 aa7.96□□□□□ -1.14
COPS7A-207ENST00000538375 SOSTDC1Q6X4U4 206 aa7.96□□□□□ -1.14
COPS7A-207ENST00000538375 TRBV10-3A0A0K0K1G6 114 aa7.95□□□□□ -1.14
COPS7A-207ENST00000538375 EIF4EBP3O60516 100 aaPredicted RBP7.95□□□□□ -1.14
COPS7A-207ENST00000538375 TIMM17BO60830 172 aa7.95□□□□□ -1.14
COPS7A-207ENST00000538375 PCP2Q8IVA1 136 aa7.95□□□□□ -1.14
COPS7A-207ENST00000538375 PRR26Q8N8Z3 221 aa7.95□□□□□ -1.14
COPS7A-207ENST00000538375 SPANXB1Q9NS25 103 aaPredicted RBP7.95□□□□□ -1.14
COPS7A-207ENST00000538375 TRBV10-2A0A0K0K1G8 114 aa7.94□□□□□ -1.14
COPS7A-207ENST00000538375 NDUFC2O95298 119 aa7.94□□□□□ -1.14
COPS7A-207ENST00000538375 DDTP30046 118 aa7.94□□□□□ -1.14
COPS7A-207ENST00000538375 KRTAP10-8P60410 259 aa7.94□□□□□ -1.14
COPS7A-207ENST00000538375 LINC00308Q8TCZ7 52 aa7.94□□□□□ -1.14
COPS7A-207ENST00000538375 LITAFQ99732 161 aa7.94□□□□□ -1.14
COPS7A-207ENST00000538375 PRYO14603 147 aa7.93□□□□□ -1.14
COPS7A-207ENST00000538375 KCNQ1DNQ9H478 68 aa7.93□□□□□ -1.14
COPS7A-207ENST00000538375 ETDCA0A1B0GVM5 59 aa7.92□□□□□ -1.14
COPS7A-207ENST00000538375 KRTAP13-1Q8IUC0 172 aa7.92□□□□□ -1.14
COPS7A-207ENST00000538375 OR13C6PQ8NH95 151 aa7.92□□□□□ -1.14
COPS7A-207ENST00000538375 HIGD2AQ9BW72 106 aa7.92□□□□□ -1.14
COPS7A-207ENST00000538375 KRTAP1-4P0C5Y4 121 aa7.91□□□□□ -1.14
COPS7A-207ENST00000538375 SPANXCQ9NY87 97 aa7.91□□□□□ -1.14
COPS7A-207ENST00000538375 LINC00337Q8N6G1 96 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms