RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 Q6ZRP5 223 aa10.08□□□□□ -0.8
SFSWAP-206ENST00000537582 HECTD4Q9Y4D8 3996 aa10.08□□□□□ -0.8
SFSWAP-206ENST00000537582 TIMM17BO60830 172 aa10.07□□□□□ -0.8
SFSWAP-206ENST00000537582 RNF151Q2KHN1 245 aa10.07□□□□□ -0.8
SFSWAP-206ENST00000537582 OCIAD2Q56VL3 154 aa10.07□□□□□ -0.8
SFSWAP-206ENST00000537582 C9orf163Q8N9P6 203 aa10.07□□□□□ -0.8
SFSWAP-206ENST00000537582 IGLV5-52A0A0A0MRZ9 124 aa10.06□□□□□ -0.8
SFSWAP-206ENST00000537582 RPL18AQ02543 176 aaKnown RBP10.06□□□□□ -0.8
SFSWAP-206ENST00000537582 GAGE2EQ4V326 116 aa10.06□□□□□ -0.8
SFSWAP-206ENST00000537582 SOSTDC1Q6X4U4 206 aa10.06□□□□□ -0.8
SFSWAP-206ENST00000537582 LINC00336Q6ZUF6 198 aa10.06□□□□□ -0.8
SFSWAP-206ENST00000537582 XAGE1AQ9HD64 81 aa10.06□□□□□ -0.8
SFSWAP-206ENST00000537582 GAGE2DQ9UEU5 116 aa10.06□□□□□ -0.8
SFSWAP-206ENST00000537582 TMEM238C9JI98 176 aa10.05□□□□□ -0.8
SFSWAP-206ENST00000537582 NDUFC2-KCTD14E9PQ53 114 aa10.05□□□□□ -0.8
SFSWAP-206ENST00000537582 CIRBPQ14011 172 aaKnown RBP10.05□□□□□ -0.8
SFSWAP-206ENST00000537582 COX17Q14061 63 aa10.05□□□□□ -0.8
SFSWAP-206ENST00000537582 SND1-IT1Q9HBX3 110 aa10.05□□□□□ -0.8
SFSWAP-206ENST00000537582 CBY1Q9Y3M2 126 aa10.05□□□□□ -0.8
SFSWAP-206ENST00000537582 A0A096LNI7 61 aa10.04□□□□□ -0.8
SFSWAP-206ENST00000537582 A0A1B0GVY2 172 aa10.04□□□□□ -0.8
SFSWAP-206ENST00000537582 CHTF8P0CG12 524 aa10.04□□□□□ -0.8
SFSWAP-206ENST00000537582 GAGE2BQ13066 116 aa10.04□□□□□ -0.8
SFSWAP-206ENST00000537582 SDIM1Q6ZPB5 146 aa10.04□□□□□ -0.8
SFSWAP-206ENST00000537582 SPANXDQ9BXN6 97 aa10.04□□□□□ -0.8
SFSWAP-206ENST00000537582 SPANXCQ9NY87 97 aa10.04□□□□□ -0.8
SFSWAP-206ENST00000537582 LOC107984640A0A0U1RRK4 108 aa10.03□□□□□ -0.8
SFSWAP-206ENST00000537582 K7ERU9 68 aa10.03□□□□□ -0.8
SFSWAP-206ENST00000537582 TLX1NBP0CAT3 122 aa10.03□□□□□ -0.8
SFSWAP-206ENST00000537582 Q8NDZ9 215 aa10.03□□□□□ -0.8
SFSWAP-206ENST00000537582 PGPEP1Q9NXJ5 209 aa10.03□□□□□ -0.8
SFSWAP-206ENST00000537582 DNAH5Q8TE73 4624 aa10.02□□□□□ -0.8
SFSWAP-206ENST00000537582 IGKV2-24A0A0C4DH68 120 aa10.02□□□□□ -0.81
SFSWAP-206ENST00000537582 PANO1I0J062 215 aa10.02□□□□□ -0.81
SFSWAP-206ENST00000537582 C9orf129Q5T035 196 aaKnown RBP10.02□□□□□ -0.81
SFSWAP-206ENST00000537582 MUSTN1Q8IVN3 82 aa10.02□□□□□ -0.81
SFSWAP-206ENST00000537582 LINC00308Q8TCZ7 52 aa10.02□□□□□ -0.81
SFSWAP-206ENST00000537582 TSPAN13O95857 204 aa10.01□□□□□ -0.81
SFSWAP-206ENST00000537582 LYRM7Q5U5X0 104 aa10.01□□□□□ -0.81
SFSWAP-206ENST00000537582 A0A0B4J2C4 111 aa10□□□□□ -0.81
SFSWAP-206ENST00000537582 F8W1H4 67 aa10□□□□□ -0.81
SFSWAP-206ENST00000537582 CFC1BP0CG36 223 aa10□□□□□ -0.81
SFSWAP-206ENST00000537582 CFC1P0CG37 223 aa10□□□□□ -0.81
SFSWAP-206ENST00000537582 RPL24P83731 157 aaKnown RBP10□□□□□ -0.81
SFSWAP-206ENST00000537582 PKHD1P08F94 4074 aa9.99□□□□□ -0.81
SFSWAP-206ENST00000537582 FAM168BA1KXE4 195 aa9.99□□□□□ -0.81
SFSWAP-206ENST00000537582 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.99□□□□□ -0.81
SFSWAP-206ENST00000537582 C16orf90A8MZG2 172 aa9.98□□□□□ -0.81
SFSWAP-206ENST00000537582 KRTAP10-1P60331 282 aa9.98□□□□□ -0.81
SFSWAP-206ENST00000537582 PRR3P79522 188 aaKnown RBP9.97□□□□□ -0.81
SFSWAP-206ENST00000537582 PRO1854Q9UHT4 67 aa9.97□□□□□ -0.81
SFSWAP-206ENST00000537582 A4D1N5 150 aa9.97□□□□□ -0.81
SFSWAP-206ENST00000537582 SERTAD4-AS1Q5TG53 156 aa9.97□□□□□ -0.81
SFSWAP-206ENST00000537582 KRTAP7-1Q8IUC3 87 aa9.97□□□□□ -0.81
SFSWAP-206ENST00000537582 PRO0461Q9UI25 63 aa9.97□□□□□ -0.81
SFSWAP-206ENST00000537582 H3BMG7 143 aa9.95□□□□□ -0.82
SFSWAP-206ENST00000537582 IFITM1P13164 125 aa9.95□□□□□ -0.82
SFSWAP-206ENST00000537582 FAM30AQ9NZY2 134 aa9.95□□□□□ -0.82
SFSWAP-206ENST00000537582 LOC107984156A0A0G2JMH3 177 aa9.94□□□□□ -0.82
SFSWAP-206ENST00000537582 A0A1W2PNN7 141 aa9.94□□□□□ -0.82
SFSWAP-206ENST00000537582 ARL17AQ8IVW1 177 aa9.94□□□□□ -0.82
SFSWAP-206ENST00000537582 TRBV20-1A0A075B6N2 111 aa9.93□□□□□ -0.82
SFSWAP-206ENST00000537582 FAM19A5Q7Z5A7 132 aaPredicted RBP9.93□□□□□ -0.82
SFSWAP-206ENST00000537582 SPACA4Q8TDM5 124 aa9.93□□□□□ -0.82
SFSWAP-206ENST00000537582 NCR3O14931 201 aa9.92□□□□□ -0.82
SFSWAP-206ENST00000537582 VPREB1P12018 145 aa9.92□□□□□ -0.82
SFSWAP-206ENST00000537582 IGKV2-28A0A075B6P5 120 aa9.92□□□□□ -0.82
SFSWAP-206ENST00000537582 IGKV2D-28P01615 120 aa9.92□□□□□ -0.82
SFSWAP-206ENST00000537582 HAMPP81172 84 aa9.92□□□□□ -0.82
SFSWAP-206ENST00000537582 VPS25Q9BRG1 176 aa9.91□□□□□ -0.82
SFSWAP-206ENST00000537582 PPDPFQ9H3Y8 114 aa9.9□□□□□ -0.82
SFSWAP-206ENST00000537582 DYNC1H1Q14204 4646 aaKnown RBP9.9□□□□□ -0.83
SFSWAP-206ENST00000537582 DPH3Q96FX2 82 aa9.89□□□□□ -0.83
SFSWAP-206ENST00000537582 PKIGQ9Y2B9 76 aa9.89□□□□□ -0.83
SFSWAP-206ENST00000537582 A0A087WYN8 130 aa9.88□□□□□ -0.83
SFSWAP-206ENST00000537582 PSMB2P49721 201 aa9.88□□□□□ -0.83
SFSWAP-206ENST00000537582 COPS9Q8WXC6 57 aa9.88□□□□□ -0.83
SFSWAP-206ENST00000537582 LRP1BQ9NZR2 4599 aa9.88□□□□□ -0.83
SFSWAP-206ENST00000537582 NDUFC2O95298 119 aa9.88□□□□□ -0.83
SFSWAP-206ENST00000537582 TCL1BO95988 128 aa9.88□□□□□ -0.83
SFSWAP-206ENST00000537582 Q6ZSA8 131 aa9.88□□□□□ -0.83
SFSWAP-206ENST00000537582 LINC00337Q8N6G1 96 aa9.88□□□□□ -0.83
SFSWAP-206ENST00000537582 LINC00474Q9P2X8 69 aa9.88□□□□□ -0.83
SFSWAP-206ENST00000537582 PLA2G2DQ9UNK4 145 aa9.88□□□□□ -0.83
SFSWAP-206ENST00000537582 DNAH8Q96JB1 4490 aa9.87□□□□□ -0.83
SFSWAP-206ENST00000537582 J3QR89 54 aa9.87□□□□□ -0.83
SFSWAP-206ENST00000537582 C22orf24Q9Y442 160 aa9.87□□□□□ -0.83
SFSWAP-206ENST00000537582 M0QXV9 152 aa9.86□□□□□ -0.83
SFSWAP-206ENST00000537582 SMCPP49901 116 aaPredicted RBP9.86□□□□□ -0.83
SFSWAP-206ENST00000537582 IGLV5-37A0A075B6J1 123 aa9.85□□□□□ -0.83
SFSWAP-206ENST00000537582 ETDBQ3ZM63 59 aa9.85□□□□□ -0.83
SFSWAP-206ENST00000537582 PHF5AQ7RTV0 110 aaKnown RBP9.85□□□□□ -0.83
SFSWAP-206ENST00000537582 C7orf33Q8WU49 177 aa9.85□□□□□ -0.83
SFSWAP-206ENST00000537582 NKAPP1Q8N9T2 125 aa9.84□□□□□ -0.83
SFSWAP-206ENST00000537582 SCGB1C2P0DMR2 95 aa9.84□□□□□ -0.83
SFSWAP-206ENST00000537582 SCXQ7RTU7 201 aa9.84□□□□□ -0.83
SFSWAP-206ENST00000537582 MTURNQ8N3F0 131 aa9.84□□□□□ -0.83
SFSWAP-206ENST00000537582 CIRBP-AS1Q8TBR5 109 aa9.84□□□□□ -0.83
SFSWAP-206ENST00000537582 EPPK1P58107 5090 aaKnown RBP9.83□□□□□ -0.84
SFSWAP-206ENST00000537582 Q1RN00 199 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms