RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 LYPD5Q6UWN5 251 aa9.65□□□□□ -0.86
USP44-203ENST00000537435 C9orf153Q5TBE3 101 aa9.64□□□□□ -0.87
USP44-203ENST00000537435 WFDC9Q8NEX5 89 aa9.64□□□□□ -0.87
USP44-203ENST00000537435 OTOGQ6ZRI0 2925 aa9.64□□□□□ -0.87
USP44-203ENST00000537435 HECTD1Q9ULT8 2610 aa9.64□□□□□ -0.87
USP44-203ENST00000537435 TENM1Q9UKZ4 2725 aa9.64□□□□□ -0.87
USP44-203ENST00000537435 KMT2BQ9UMN6 2715 aaPredicted RBP9.63□□□□□ -0.87
USP44-203ENST00000537435 ATOX1O00244 68 aa9.63□□□□□ -0.87
USP44-203ENST00000537435 A0A087WVE0 104 aa9.63□□□□□ -0.87
USP44-203ENST00000537435 hADV29S1A0JD25 119 aa9.63□□□□□ -0.87
USP44-203ENST00000537435 IGLV6-57P01721 117 aa9.63□□□□□ -0.87
USP44-203ENST00000537435 C6orf48Q9UBA6 75 aa9.62□□□□□ -0.87
USP44-203ENST00000537435 GVQW2A0A096LPI5 108 aaPredicted RBP9.62□□□□□ -0.87
USP44-203ENST00000537435 COX7CP15954 63 aa9.62□□□□□ -0.87
USP44-203ENST00000537435 NSD1Q96L73 2696 aaPredicted RBP9.61□□□□□ -0.87
USP44-203ENST00000537435 C2orf48Q96LS8 159 aa9.61□□□□□ -0.87
USP44-203ENST00000537435 WIPF1O43516 503 aa9.61□□□□□ -0.87
USP44-203ENST00000537435 XAGE1AQ9HD64 81 aa9.61□□□□□ -0.87
USP44-203ENST00000537435 TRRAPQ9Y4A5 3859 aa9.6□□□□□ -0.87
USP44-203ENST00000537435 WFDC10BQ8IUB3 73 aa9.59□□□□□ -0.87
USP44-203ENST00000537435 SMIM20Q8N5G0 67 aa9.59□□□□□ -0.87
USP44-203ENST00000537435 ATRQ13535 2644 aa9.59□□□□□ -0.87
USP44-203ENST00000537435 TRBV10-3A0A0K0K1G6 114 aa9.59□□□□□ -0.87
USP44-203ENST00000537435 RETNQ9HD89 108 aa9.59□□□□□ -0.87
USP44-203ENST00000537435 ZNF561-AS1K7EIQ3 104 aa9.58□□□□□ -0.88
USP44-203ENST00000537435 RBM3P98179 157 aaKnown RBP9.58□□□□□ -0.88
USP44-203ENST00000537435 HIGD2BQ4VC39 106 aa9.58□□□□□ -0.88
USP44-203ENST00000537435 KPRPQ5T749 579 aaPredicted RBP9.58□□□□□ -0.88
USP44-203ENST00000537435 LAMTOR3Q9UHA4 124 aa9.57□□□□□ -0.88
USP44-203ENST00000537435 TRAV23DV6A0A075B6W5 121 aa9.57□□□□□ -0.88
USP44-203ENST00000537435 Q6ZQY7 126 aa9.57□□□□□ -0.88
USP44-203ENST00000537435 USP17L23D6RBM5 183 aa9.56□□□□□ -0.88
USP44-203ENST00000537435 Q6ZQT0 140 aa9.56□□□□□ -0.88
USP44-203ENST00000537435 DIRC1Q969H9 104 aa9.56□□□□□ -0.88
USP44-203ENST00000537435 CAMK2N2Q96S95 79 aa9.56□□□□□ -0.88
USP44-203ENST00000537435 OXLD1Q5BKU9 147 aa9.55□□□□□ -0.88
USP44-203ENST00000537435 ATP5EP2Q5VTU8 51 aa9.55□□□□□ -0.88
USP44-203ENST00000537435 UBL5Q9BZL1 73 aa9.55□□□□□ -0.88
USP44-203ENST00000537435 HIVEP1P15822 2718 aa9.54□□□□□ -0.88
USP44-203ENST00000537435 TEP1Q99973 2627 aaKnown RBP9.54□□□□□ -0.88
USP44-203ENST00000537435 CRYGAP11844 174 aa9.54□□□□□ -0.88
USP44-203ENST00000537435 KRTAP26-1Q6PEX3 210 aa9.54□□□□□ -0.88
USP44-203ENST00000537435 Q6ZTC4 211 aa9.54□□□□□ -0.88
USP44-203ENST00000537435 LOC110117498A0A087WWA1 95 aa9.54□□□□□ -0.88
USP44-203ENST00000537435 H3BNG1 76 aa9.54□□□□□ -0.88
USP44-203ENST00000537435 M0R2N4 97 aa9.53□□□□□ -0.88
USP44-203ENST00000537435 ZNF73O43830 326 aaPredicted RBP9.53□□□□□ -0.88
USP44-203ENST00000537435 SERP2Q8N6R1 65 aa9.53□□□□□ -0.88
USP44-203ENST00000537435 VPREB1P12018 145 aa9.52□□□□□ -0.89
USP44-203ENST00000537435 KRTAP10-11P60412 298 aa9.52□□□□□ -0.89
USP44-203ENST00000537435 Q6ZRU5 148 aa9.52□□□□□ -0.89
USP44-203ENST00000537435 FAM19A1Q7Z5A9 133 aa9.52□□□□□ -0.89
USP44-203ENST00000537435 COX7BP24311 80 aa9.51□□□□□ -0.89
USP44-203ENST00000537435 EGFEM1PQ0D2K5 195 aa9.51□□□□□ -0.89
USP44-203ENST00000537435 DSCR8Q96T75 97 aa9.51□□□□□ -0.89
USP44-203ENST00000537435 ESRGQ1W209 222 aa9.5□□□□□ -0.89
USP44-203ENST00000537435 C15orf56Q8N910 161 aa9.5□□□□□ -0.89
USP44-203ENST00000537435 H3BQ85 93 aa9.49□□□□□ -0.89
USP44-203ENST00000537435 ELOF1P60002 83 aaKnown RBP9.49□□□□□ -0.89
USP44-203ENST00000537435 CYSTM1Q9H1C7 97 aa9.49□□□□□ -0.89
USP44-203ENST00000537435 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.49□□□□□ -0.89
USP44-203ENST00000537435 NDUFC2-KCTD14E9PQ53 114 aa9.47□□□□□ -0.89
USP44-203ENST00000537435 M0R378 163 aa9.47□□□□□ -0.89
USP44-203ENST00000537435 UPK3BQ9BT76 320 aa9.47□□□□□ -0.89
USP44-203ENST00000537435 C1orf43Q9BWL3 253 aa9.47□□□□□ -0.89
USP44-203ENST00000537435 GHRHP01286 108 aa9.46□□□□□ -0.89
USP44-203ENST00000537435 PDE6GP18545 87 aa9.46□□□□□ -0.89
USP44-203ENST00000537435 TRBV7-6A0A0J9YX20 115 aa9.46□□□□□ -0.9
USP44-203ENST00000537435 Q6ZVQ6 151 aa9.45□□□□□ -0.9
USP44-203ENST00000537435 IGKV2D-24A0A075B6R9 120 aa9.45□□□□□ -0.9
USP44-203ENST00000537435 LINC01547P58512 204 aaPredicted RBP9.44□□□□□ -0.9
USP44-203ENST00000537435 LINC01556Q5JQF7 62 aa9.44□□□□□ -0.9
USP44-203ENST00000537435 Q6ZRP5 223 aa9.44□□□□□ -0.9
USP44-203ENST00000537435 DEFB131BA0A096LNP1 70 aa9.44□□□□□ -0.9
USP44-203ENST00000537435 HAMPP81172 84 aa9.44□□□□□ -0.9
USP44-203ENST00000537435 SVIPQ8NHG7 77 aa9.44□□□□□ -0.9
USP44-203ENST00000537435 TRBV7-4A0A0J9YYF1 115 aa9.43□□□□□ -0.9
USP44-203ENST00000537435 LINC00528Q8N1L1 170 aa9.42□□□□□ -0.9
USP44-203ENST00000537435 SYCNQ0VAF6 134 aa9.41□□□□□ -0.9
USP44-203ENST00000537435 C11orf45Q8TAV5 145 aa9.41□□□□□ -0.9
USP44-203ENST00000537435 PKD1L1Q8TDX9 2849 aa9.39□□□□□ -0.91
USP44-203ENST00000537435 F8WDY8 70 aa9.39□□□□□ -0.91
USP44-203ENST00000537435 LOC107984640A0A0U1RRK4 108 aa9.38□□□□□ -0.91
USP44-203ENST00000537435 TMEM258P61165 79 aa9.38□□□□□ -0.91
USP44-203ENST00000537435 CXCL6P80162 114 aa9.38□□□□□ -0.91
USP44-203ENST00000537435 KRTAP24-1Q3LI83 254 aa9.37□□□□□ -0.91
USP44-203ENST00000537435 J3KT08 172 aa9.36□□□□□ -0.91
USP44-203ENST00000537435 SERTAD4-AS1Q5TG53 156 aa9.36□□□□□ -0.91
USP44-203ENST00000537435 NKAPP1Q8N9T2 125 aa9.36□□□□□ -0.91
USP44-203ENST00000537435 DNAH10OSP0CZ25 163 aa9.36□□□□□ -0.91
USP44-203ENST00000537435 TENM3Q9P273 2699 aa9.35□□□□□ -0.91
USP44-203ENST00000537435 ANK2Q01484 3957 aa9.35□□□□□ -0.91
USP44-203ENST00000537435 SCXQ7RTU7 201 aa9.35□□□□□ -0.91
USP44-203ENST00000537435 C7orf33Q8WU49 177 aa9.34□□□□□ -0.91
USP44-203ENST00000537435 KCNQ1DNQ9H478 68 aa9.34□□□□□ -0.91
USP44-203ENST00000537435 C20orf197Q8N268 126 aa9.34□□□□□ -0.91
USP44-203ENST00000537435 TRAV10A0A0B4J240 114 aa9.33□□□□□ -0.92
USP44-203ENST00000537435 BCE1O60756 84 aa9.33□□□□□ -0.92
USP44-203ENST00000537435 TRAV7A0A075B6U4 112 aa9.32□□□□□ -0.92
USP44-203ENST00000537435 DPH3Q96FX2 82 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms