RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 ATP5EP2Q5VTU8 51 aa3.87□□□□□ -1.79
VPS33A-203ENST00000536212 CLPSL2Q6UWE3 100 aa3.87□□□□□ -1.79
VPS33A-203ENST00000536212 LINC00575Q6W349 94 aa3.87□□□□□ -1.79
VPS33A-203ENST00000536212 C11orf68Q9H3H3 251 aaKnown RBP3.87□□□□□ -1.79
VPS33A-203ENST00000536212 GVQW2A0A096LPI5 108 aaPredicted RBP3.86□□□□□ -1.79
VPS33A-203ENST00000536212 TRBV10-3A0A0K0K1G6 114 aa3.86□□□□□ -1.79
VPS33A-203ENST00000536212 KRTAP29-1A8MX34 341 aaPredicted RBP3.86□□□□□ -1.79
VPS33A-203ENST00000536212 ANGP03950 147 aaKnown RBP3.86□□□□□ -1.79
VPS33A-203ENST00000536212 MIFP14174 115 aa3.86□□□□□ -1.79
VPS33A-203ENST00000536212 APOC4P55056 127 aa3.86□□□□□ -1.79
VPS33A-203ENST00000536212 PRR3P79522 188 aaKnown RBP3.86□□□□□ -1.79
VPS33A-203ENST00000536212 LELP1Q5T871 98 aa3.86□□□□□ -1.79
VPS33A-203ENST00000536212 Q8NAQ8 132 aa3.86□□□□□ -1.79
VPS33A-203ENST00000536212 Q8NDZ9 215 aa3.86□□□□□ -1.79
VPS33A-203ENST00000536212 PRR34Q9NV39 138 aa3.86□□□□□ -1.79
VPS33A-203ENST00000536212 SPG11Q96JI7 2443 aa3.85□□□□□ -1.79
VPS33A-203ENST00000536212 NCOR2Q9Y618 2525 aa3.85□□□□□ -1.79
VPS33A-203ENST00000536212 LOC110117498A0A087WWA1 95 aa3.85□□□□□ -1.79
VPS33A-203ENST00000536212 A0A096LPF7 62 aa3.85□□□□□ -1.79
VPS33A-203ENST00000536212 IGKV3D-7A0A0C4DH55 119 aa3.85□□□□□ -1.79
VPS33A-203ENST00000536212 H3BQ85 93 aa3.85□□□□□ -1.79
VPS33A-203ENST00000536212 NDUFC1O43677 76 aa3.85□□□□□ -1.79
VPS33A-203ENST00000536212 IGLV6-57P01721 117 aa3.85□□□□□ -1.79
VPS33A-203ENST00000536212 DAD1P61803 113 aa3.85□□□□□ -1.79
VPS33A-203ENST00000536212 SPAG11BQ08648 103 aa3.85□□□□□ -1.79
VPS33A-203ENST00000536212 C6orf99Q4VX62 202 aa3.85□□□□□ -1.79
VPS33A-203ENST00000536212 C6orf223Q8N319 242 aa3.85□□□□□ -1.79
VPS33A-203ENST00000536212 SPATA3Q8NHX4 192 aa3.85□□□□□ -1.79
VPS33A-203ENST00000536212 BRK1Q8WUW1 75 aa3.85□□□□□ -1.79
VPS33A-203ENST00000536212 UPK3BQ9BT76 320 aa3.85□□□□□ -1.79
VPS33A-203ENST00000536212 hADV29S1A0JD25 119 aa3.84□□□□□ -1.79
VPS33A-203ENST00000536212 SPART-AS1P0CW21 52 aa3.84□□□□□ -1.79
VPS33A-203ENST00000536212 KRTAP10-11P60412 298 aa3.84□□□□□ -1.79
VPS33A-203ENST00000536212 DEFB135Q30KP9 77 aa3.84□□□□□ -1.79
VPS33A-203ENST00000536212 C9orf116Q5BN46 136 aaPredicted RBP3.84□□□□□ -1.79
VPS33A-203ENST00000536212 UNQ6190/PRO20217Q6UXQ8 127 aa3.84□□□□□ -1.79
VPS33A-203ENST00000536212 CELA1Q9UNI1 258 aa3.84□□□□□ -1.79
VPS33A-203ENST00000536212 PKD1L2Q7Z442 2459 aa3.84□□□□□ -1.8
VPS33A-203ENST00000536212 FBN2P35556 2912 aa3.83□□□□□ -1.8
VPS33A-203ENST00000536212 IGLV10-54A0A075B6I4 117 aa3.83□□□□□ -1.8
VPS33A-203ENST00000536212 CYSRT1A8MQ03 144 aa3.83□□□□□ -1.8
VPS33A-203ENST00000536212 ENHOQ6UWT2 76 aa3.83□□□□□ -1.8
VPS33A-203ENST00000536212 Q6ZQT0 140 aa3.83□□□□□ -1.8
VPS33A-203ENST00000536212 C3orf56Q8N813 242 aa3.83□□□□□ -1.8
VPS33A-203ENST00000536212 INAFM1C9JVW0 142 aa3.82□□□□□ -1.8
VPS33A-203ENST00000536212 H3BNG1 76 aa3.82□□□□□ -1.8
VPS33A-203ENST00000536212 J3QKU1 62 aa3.82□□□□□ -1.8
VPS33A-203ENST00000536212 DEFB4AO15263 64 aa3.82□□□□□ -1.8
VPS33A-203ENST00000536212 PDE6GP18545 87 aa3.82□□□□□ -1.8
VPS33A-203ENST00000536212 KRTAP26-1Q6PEX3 210 aa3.82□□□□□ -1.8
VPS33A-203ENST00000536212 WFDC9Q8NEX5 89 aa3.82□□□□□ -1.8
VPS33A-203ENST00000536212 DSCR8Q96T75 97 aa3.82□□□□□ -1.8
VPS33A-203ENST00000536212 SMR3AQ99954 134 aa3.82□□□□□ -1.8
VPS33A-203ENST00000536212 C6orf48Q9UBA6 75 aa3.82□□□□□ -1.8
VPS33A-203ENST00000536212 A0A087WVE0 104 aa3.81□□□□□ -1.8
VPS33A-203ENST00000536212 NDUFS5O43920 106 aa3.81□□□□□ -1.8
VPS33A-203ENST00000536212 RBM3P98179 157 aaKnown RBP3.81□□□□□ -1.8
VPS33A-203ENST00000536212 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.81□□□□□ -1.8
VPS33A-203ENST00000536212 DIRC1Q969H9 104 aa3.81□□□□□ -1.8
VPS33A-203ENST00000536212 UBL5Q9BZL1 73 aa3.81□□□□□ -1.8
VPS33A-203ENST00000536212 KLK12Q9UKR0 248 aa3.81□□□□□ -1.8
VPS33A-203ENST00000536212 ZFHX3Q15911 3703 aa3.8□□□□□ -1.8
VPS33A-203ENST00000536212 CACNA1AO00555 2505 aa3.8□□□□□ -1.8
VPS33A-203ENST00000536212 CREBBPQ92793 2442 aa3.8□□□□□ -1.8
VPS33A-203ENST00000536212 CYSTM1Q9H1C7 97 aa3.8□□□□□ -1.8
VPS33A-203ENST00000536212 USP9XQ93008 2570 aaPredicted RBP3.8□□□□□ -1.8
VPS33A-203ENST00000536212 CELSR1Q9NYQ6 3014 aa3.8□□□□□ -1.8
VPS33A-203ENST00000536212 TRAV23DV6A0A075B6W5 121 aa3.79□□□□□ -1.8
VPS33A-203ENST00000536212 IGLV5-52A0A0A0MRZ9 124 aa3.79□□□□□ -1.8
VPS33A-203ENST00000536212 TRBV7-4A0A0J9YYF1 115 aa3.79□□□□□ -1.8
VPS33A-203ENST00000536212 M0R2N4 97 aa3.79□□□□□ -1.8
VPS33A-203ENST00000536212 CDK2AP2O75956 126 aa3.79□□□□□ -1.8
VPS33A-203ENST00000536212 OXTP01178 125 aa3.79□□□□□ -1.8
VPS33A-203ENST00000536212 COX7BP24311 80 aa3.79□□□□□ -1.8
VPS33A-203ENST00000536212 ELOF1P60002 83 aaKnown RBP3.79□□□□□ -1.8
VPS33A-203ENST00000536212 EGFEM1PQ0D2K5 195 aa3.79□□□□□ -1.8
VPS33A-203ENST00000536212 Q6ZVQ6 151 aa3.79□□□□□ -1.8
VPS33A-203ENST00000536212 SVEP1Q4LDE5 3571 aa3.79□□□□□ -1.8
VPS33A-203ENST00000536212 IGLV9-49A0A0B4J1Y8 123 aa3.78□□□□□ -1.8
VPS33A-203ENST00000536212 M0R378 163 aa3.78□□□□□ -1.8
VPS33A-203ENST00000536212 ZNF73O43830 326 aaPredicted RBP3.78□□□□□ -1.8
VPS33A-203ENST00000536212 HTN3P15516 51 aa3.78□□□□□ -1.8
VPS33A-203ENST00000536212 CXCL6P80162 114 aa3.78□□□□□ -1.8
VPS33A-203ENST00000536212 Q6ZQY7 126 aa3.78□□□□□ -1.8
VPS33A-203ENST00000536212 PRR26Q8N8Z3 221 aa3.78□□□□□ -1.8
VPS33A-203ENST00000536212 PIEZO1Q92508 2521 aa3.78□□□□□ -1.8
VPS33A-203ENST00000536212 ASH1LQ9NR48 2969 aaKnown RBP3.78□□□□□ -1.81
VPS33A-203ENST00000536212 TRAV7A0A075B6U4 112 aa3.77□□□□□ -1.81
VPS33A-203ENST00000536212 LINC01547P58512 204 aaPredicted RBP3.77□□□□□ -1.81
VPS33A-203ENST00000536212 KTN1-AS1Q86SY8 53 aa3.77□□□□□ -1.81
VPS33A-203ENST00000536212 C15orf56Q8N910 161 aa3.77□□□□□ -1.81
VPS33A-203ENST00000536212 USP9YO00507 2555 aaPredicted RBP3.77□□□□□ -1.81
VPS33A-203ENST00000536212 SPTBN4Q9H254 2564 aa3.77□□□□□ -1.81
VPS33A-203ENST00000536212 ANKRD17O75179 2603 aaKnown RBP3.76□□□□□ -1.81
VPS33A-203ENST00000536212 IGLV5-37A0A075B6J1 123 aa3.76□□□□□ -1.81
VPS33A-203ENST00000536212 KPRPQ5T749 579 aaPredicted RBP3.76□□□□□ -1.81
VPS33A-203ENST00000536212 WFDC10BQ8IUB3 73 aa3.76□□□□□ -1.81
VPS33A-203ENST00000536212 CAMK2N2Q96S95 79 aa3.76□□□□□ -1.81
VPS33A-203ENST00000536212 TM2D3Q9BRN9 247 aa3.76□□□□□ -1.81
VPS33A-203ENST00000536212 XAGE1AQ9HD64 81 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms