RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.61□□□□□ -1.671e-7■■■□□ 19.2
CPSF7-215ENST00000536145 CSMD1Q96PZ7 3565 aa4.61□□□□□ -1.67
CPSF7-215ENST00000536145 VPREB1P12018 145 aa4.61□□□□□ -1.67
CPSF7-215ENST00000536145 LINC00528Q8N1L1 170 aa4.61□□□□□ -1.67
CPSF7-215ENST00000536145 ZCCHC13Q8WW36 166 aaKnown RBP4.61□□□□□ -1.67
CPSF7-215ENST00000536145 C1orf43Q9BWL3 253 aa4.61□□□□□ -1.67
CPSF7-215ENST00000536145 PRR34Q9NV39 138 aa4.61□□□□□ -1.67
CPSF7-215ENST00000536145 C6orf48Q9UBA6 75 aa4.61□□□□□ -1.67
CPSF7-215ENST00000536145 CYSRT1A8MQ03 144 aa4.6□□□□□ -1.67
CPSF7-215ENST00000536145 ZNF73O43830 326 aaPredicted RBP4.6□□□□□ -1.67
CPSF7-215ENST00000536145 DEFB130BP0DP73 79 aa4.6□□□□□ -1.67
CPSF7-215ENST00000536145 DEFB130AP0DP74 79 aa4.6□□□□□ -1.67
CPSF7-215ENST00000536145 ESRGQ1W209 222 aa4.6□□□□□ -1.67
CPSF7-215ENST00000536145 DEFB113Q30KQ7 82 aa4.6□□□□□ -1.67
CPSF7-215ENST00000536145 KRTAP1-3Q8IUG1 177 aa4.6□□□□□ -1.67
CPSF7-215ENST00000536145 IGLV10-54A0A075B6I4 117 aa4.59□□□□□ -1.67
CPSF7-215ENST00000536145 hDV103S1A0JD37 113 aa4.59□□□□□ -1.67
CPSF7-215ENST00000536145 DNAJC9-AS1A6NH13 148 aa4.59□□□□□ -1.67
CPSF7-215ENST00000536145 FUSP35637 526 aaKnown RBP eCLIP4.59□□□□□ -1.67
CPSF7-215ENST00000536145 PKIGQ9Y2B9 76 aa4.59□□□□□ -1.67
CPSF7-215ENST00000536145 ADGRG4Q8IZF6 3080 aa4.59□□□□□ -1.68
CPSF7-215ENST00000536145 LRBAP50851 2863 aa4.59□□□□□ -1.68
CPSF7-215ENST00000536145 LYRM9A8MSI8 78 aa4.58□□□□□ -1.68
CPSF7-215ENST00000536145 ANGP03950 147 aaKnown RBP4.58□□□□□ -1.68
CPSF7-215ENST00000536145 C1orf195Q5TG92 126 aa4.58□□□□□ -1.68
CPSF7-215ENST00000536145 KRTAP26-1Q6PEX3 210 aa4.58□□□□□ -1.68
CPSF7-215ENST00000536145 SPTAN1Q13813 2472 aaKnown RBP4.57□□□□□ -1.68
CPSF7-215ENST00000536145 A0A096LPF7 62 aa4.57□□□□□ -1.68
CPSF7-215ENST00000536145 M0R378 163 aa4.57□□□□□ -1.68
CPSF7-215ENST00000536145 LELP1Q5T871 98 aa4.57□□□□□ -1.68
CPSF7-215ENST00000536145 Q8N9L7 120 aa4.57□□□□□ -1.68
CPSF7-215ENST00000536145 IGLV5-48A0A075B6I7 105 aa4.56□□□□□ -1.68
CPSF7-215ENST00000536145 A0A1B0GW54 56 aa4.56□□□□□ -1.68
CPSF7-215ENST00000536145 Q1T7F1 81 aa4.56□□□□□ -1.68
CPSF7-215ENST00000536145 BRK1Q8WUW1 75 aa4.56□□□□□ -1.68
CPSF7-215ENST00000536145 HIGD2AQ9BW72 106 aa4.56□□□□□ -1.68
CPSF7-215ENST00000536145 CFAP46Q8IYW2 2715 aa4.55□□□□□ -1.68
CPSF7-215ENST00000536145 CHD6Q8TD26 2715 aa4.55□□□□□ -1.68
CPSF7-215ENST00000536145 TNP2Q05952 138 aa4.55□□□□□ -1.68
CPSF7-215ENST00000536145 EGFEM1PQ0D2K5 195 aa4.55□□□□□ -1.68
CPSF7-215ENST00000536145 CYP4F30PQ9H0H9 118 aa4.55□□□□□ -1.68
CPSF7-215ENST00000536145 XAGE1AQ9HD64 81 aa4.55□□□□□ -1.68
CPSF7-215ENST00000536145 DOPEY1Q5JWR5 2465 aa4.55□□□□□ -1.68
CPSF7-215ENST00000536145 AKAP6Q13023 2319 aa4.55□□□□□ -1.68
CPSF7-215ENST00000536145 PRR15Q8IV56 129 aa4.54□□□□□ -1.68
CPSF7-215ENST00000536145 Q8N377 158 aa4.54□□□□□ -1.68
CPSF7-215ENST00000536145 MPLKIPQ8TAP9 179 aa4.54□□□□□ -1.68
CPSF7-215ENST00000536145 KLK12Q9UKR0 248 aa4.54□□□□□ -1.68
CPSF7-215ENST00000536145 A0A1W2PNM2 257 aa4.53□□□□□ -1.68
CPSF7-215ENST00000536145 SMIM29Q86T20 159 aa4.53□□□□□ -1.68
CPSF7-215ENST00000536145 V9GYY9 64 aa4.53□□□□□ -1.68
CPSF7-215ENST00000536145 TACC2O95359 2948 aa4.52□□□□□ -1.69
CPSF7-215ENST00000536145 USP9XQ93008 2570 aaPredicted RBP4.52□□□□□ -1.69
CPSF7-215ENST00000536145 Q6ZRP5 223 aa4.52□□□□□ -1.69
CPSF7-215ENST00000536145 Q6ZRU5 148 aa4.52□□□□□ -1.69
CPSF7-215ENST00000536145 KCNQ1DNQ9H478 68 aa4.52□□□□□ -1.69
CPSF7-215ENST00000536145 DSCR10P59022 87 aa4.51□□□□□ -1.69
CPSF7-215ENST00000536145 SEC61GP60059 68 aa4.51□□□□□ -1.69
CPSF7-215ENST00000536145 KRTAP10-3P60369 221 aa4.51□□□□□ -1.69
CPSF7-215ENST00000536145 KRTAP1-1Q07627 177 aa4.51□□□□□ -1.69
CPSF7-215ENST00000536145 HIGD2BQ4VC39 106 aa4.51□□□□□ -1.69
CPSF7-215ENST00000536145 KPRPQ5T749 579 aaPredicted RBP4.51□□□□□ -1.69
CPSF7-215ENST00000536145 C15orf56Q8N910 161 aa4.51□□□□□ -1.69
CPSF7-215ENST00000536145 Q8NAQ8 132 aa4.51□□□□□ -1.69
CPSF7-215ENST00000536145 C1orf64Q8NEQ6 169 aa4.51□□□□□ -1.69
CPSF7-215ENST00000536145 SPRR4Q96PI1 79 aa4.51□□□□□ -1.69
CPSF7-215ENST00000536145 FAM30AQ9NZY2 134 aa4.51□□□□□ -1.69
CPSF7-215ENST00000536145 CSPG4Q6UVK1 2322 aa4.51□□□□□ -1.69
CPSF7-215ENST00000536145 ETDCA0A1B0GVM5 59 aa4.5□□□□□ -1.69
CPSF7-215ENST00000536145 KRTAP4-16G5E9R7 235 aaPredicted RBP4.5□□□□□ -1.69
CPSF7-215ENST00000536145 DAD1P61803 113 aa4.5□□□□□ -1.69
CPSF7-215ENST00000536145 Q8NBF4 154 aa4.5□□□□□ -1.69
CPSF7-215ENST00000536145 PLA2G2DQ9UNK4 145 aa4.5□□□□□ -1.69
CPSF7-215ENST00000536145 FASNP49327 2511 aaKnown RBP4.5□□□□□ -1.69
CPSF7-215ENST00000536145 UBR5O95071 2799 aaPredicted RBP4.5□□□□□ -1.69
CPSF7-215ENST00000536145 COL12A1Q99715 3063 aa4.49□□□□□ -1.69
CPSF7-215ENST00000536145 NBPF19A0A087WUL8 3843 aa4.49□□□□□ -1.69
CPSF7-215ENST00000536145 C3orf84H3BNL1 204 aa4.49□□□□□ -1.69
CPSF7-215ENST00000536145 SPRR1AP35321 89 aa4.49□□□□□ -1.69
CPSF7-215ENST00000536145 CAMK2N2Q96S95 79 aa4.49□□□□□ -1.69
CPSF7-215ENST00000536145 USP9YO00507 2555 aaPredicted RBP4.49□□□□□ -1.69
CPSF7-215ENST00000536145 MYO18BQ8IUG5 2567 aa4.49□□□□□ -1.69
CPSF7-215ENST00000536145 IGLV5-37A0A075B6J1 123 aa4.48□□□□□ -1.69
CPSF7-215ENST00000536145 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.48□□□□□ -1.69
CPSF7-215ENST00000536145 C7orf33Q8WU49 177 aa4.48□□□□□ -1.69
CPSF7-215ENST00000536145 SPG11Q96JI7 2443 aa4.48□□□□□ -1.69
CPSF7-215ENST00000536145 DEFB4AO15263 64 aa4.47□□□□□ -1.69
CPSF7-215ENST00000536145 ST20-AS1Q8NBB2 130 aa4.47□□□□□ -1.69
CPSF7-215ENST00000536145 ANKRD17O75179 2603 aaKnown RBP4.46□□□□□ -1.69
CPSF7-215ENST00000536145 HELZ2Q9BYK8 2649 aaKnown RBP4.46□□□□□ -1.69
CPSF7-215ENST00000536145 TRAV22A0A0B4J277 110 aa4.46□□□□□ -1.7
CPSF7-215ENST00000536145 PSCAO43653 123 aa4.46□□□□□ -1.7
CPSF7-215ENST00000536145 TLX1NBP0CAT3 122 aa4.46□□□□□ -1.7
CPSF7-215ENST00000536145 SPART-AS1P0CW21 52 aa4.46□□□□□ -1.7
CPSF7-215ENST00000536145 SERTAD4-AS1Q5TG53 156 aa4.46□□□□□ -1.7
CPSF7-215ENST00000536145 SMR3AQ99954 134 aa4.46□□□□□ -1.7
CPSF7-215ENST00000536145 Q9BRP9 147 aa4.46□□□□□ -1.7
CPSF7-215ENST00000536145 DHRS4-AS1Q9P1J3 65 aa4.46□□□□□ -1.7
CPSF7-215ENST00000536145 NOTCH3Q9UM47 2321 aa4.46□□□□□ -1.7
CPSF7-215ENST00000536145 FLNCQ14315 2725 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms