RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 HTN3P15516 51 aa9.13□□□□□ -0.95
HDAC4-214ENST00000535493 LINC00167Q96N53 147 aa9.13□□□□□ -0.95
HDAC4-214ENST00000535493 UBL5Q9BZL1 73 aa9.13□□□□□ -0.95
HDAC4-214ENST00000535493 TMEM258P61165 79 aa9.12□□□□□ -0.95
HDAC4-214ENST00000535493 PRO0255Q9UI72 69 aa9.12□□□□□ -0.95
HDAC4-214ENST00000535493 CD164L2Q6UWJ8 174 aa9.12□□□□□ -0.95
HDAC4-214ENST00000535493 SCXQ7RTU7 201 aa9.12□□□□□ -0.95
HDAC4-214ENST00000535493 XAGE1AQ9HD64 81 aa9.12□□□□□ -0.95
HDAC4-214ENST00000535493 OTOGQ6ZRI0 2925 aa9.11□□□□□ -0.95
HDAC4-214ENST00000535493 ZNF843Q8N446 348 aa9.11□□□□□ -0.95
HDAC4-214ENST00000535493 X6R8D5 127 aa9.11□□□□□ -0.95
HDAC4-214ENST00000535493 RBM3P98179 157 aaKnown RBP9.11□□□□□ -0.95
HDAC4-214ENST00000535493 DEFB135Q30KP9 77 aa9.11□□□□□ -0.95
HDAC4-214ENST00000535493 LINC00575Q6W349 94 aa9.11□□□□□ -0.95
HDAC4-214ENST00000535493 Q6ZQY7 126 aa9.11□□□□□ -0.95
HDAC4-214ENST00000535493 TRAV10A0A0B4J240 114 aa9.09□□□□□ -0.95
HDAC4-214ENST00000535493 Q6ZQT0 140 aa9.09□□□□□ -0.95
HDAC4-214ENST00000535493 SNURFQ9Y675 71 aa9.09□□□□□ -0.95
HDAC4-214ENST00000535493 HRCT1Q6UXD1 115 aa9.09□□□□□ -0.95
HDAC4-214ENST00000535493 CYSRT1A8MQ03 144 aa9.08□□□□□ -0.96
HDAC4-214ENST00000535493 CMC4P56277 68 aaPredicted RBP9.08□□□□□ -0.96
HDAC4-214ENST00000535493 RPS28P62857 69 aaKnown RBP9.08□□□□□ -0.96
HDAC4-214ENST00000535493 HECTD1Q9ULT8 2610 aa9.08□□□□□ -0.96
HDAC4-214ENST00000535493 NDUFC2O95298 119 aa9.08□□□□□ -0.96
HDAC4-214ENST00000535493 SPAG11BQ08648 103 aa9.07□□□□□ -0.96
HDAC4-214ENST00000535493 LINC01547P58512 204 aaPredicted RBP9.07□□□□□ -0.96
HDAC4-214ENST00000535493 C5orf47Q569G3 176 aa9.07□□□□□ -0.96
HDAC4-214ENST00000535493 KLK12Q9UKR0 248 aa9.07□□□□□ -0.96
HDAC4-214ENST00000535493 KRTAP10-3P60369 221 aa9.06□□□□□ -0.96
HDAC4-214ENST00000535493 SMR3AQ99954 134 aa9.06□□□□□ -0.96
HDAC4-214ENST00000535493 CELA1Q9UNI1 258 aa9.06□□□□□ -0.96
HDAC4-214ENST00000535493 TRBV10-3A0A0K0K1G6 114 aa9.05□□□□□ -0.96
HDAC4-214ENST00000535493 COX17Q14061 63 aa9.05□□□□□ -0.96
HDAC4-214ENST00000535493 LYPD5Q6UWN5 251 aa9.05□□□□□ -0.96
HDAC4-214ENST00000535493 Q6ZVQ6 151 aa9.05□□□□□ -0.96
HDAC4-214ENST00000535493 LINC00612Q8N6U2 182 aa9.05□□□□□ -0.96
HDAC4-214ENST00000535493 IGHV4-28A0A0C4DH34 117 aa9.04□□□□□ -0.96
HDAC4-214ENST00000535493 F8P00451 2351 aa9.04□□□□□ -0.96
HDAC4-214ENST00000535493 Q5XG85 94 aa9.03□□□□□ -0.96
HDAC4-214ENST00000535493 ZNF561-AS1K7EIQ3 104 aa9.03□□□□□ -0.96
HDAC4-214ENST00000535493 RMI2Q96E14 147 aa9.03□□□□□ -0.96
HDAC4-214ENST00000535493 ATP5EP2Q5VTU8 51 aa9.03□□□□□ -0.96
HDAC4-214ENST00000535493 DAD1P61803 113 aa9.02□□□□□ -0.97
HDAC4-214ENST00000535493 KRTAP1-1Q07627 177 aa9.02□□□□□ -0.97
HDAC4-214ENST00000535493 HIGD2BQ4VC39 106 aa9.02□□□□□ -0.97
HDAC4-214ENST00000535493 Q8N9L7 120 aa9.02□□□□□ -0.97
HDAC4-214ENST00000535493 ANK2Q01484 3957 aa9.01□□□□□ -0.97
HDAC4-214ENST00000535493 IGLV6-57P01721 117 aa9□□□□□ -0.97
HDAC4-214ENST00000535493 H7BZZ5 65 aa9□□□□□ -0.97
HDAC4-214ENST00000535493 TM2D3Q9BRN9 247 aa8.99□□□□□ -0.97
HDAC4-214ENST00000535493 C6orf48Q9UBA6 75 aa8.99□□□□□ -0.97
HDAC4-214ENST00000535493 BAHCC1Q9P281 2608 aa8.99□□□□□ -0.97
HDAC4-214ENST00000535493 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.99□□□□□ -0.97
HDAC4-214ENST00000535493 MUC7Q8TAX7 377 aa8.99□□□□□ -0.97
HDAC4-214ENST00000535493 FAM236DA0A1B0GTK5 79 aa8.98□□□□□ -0.97
HDAC4-214ENST00000535493 FAM236CP0DP71 79 aa8.98□□□□□ -0.97
HDAC4-214ENST00000535493 C16orf95Q9H693 158 aa8.98□□□□□ -0.97
HDAC4-214ENST00000535493 LOC110117498A0A087WWA1 95 aa8.97□□□□□ -0.97
HDAC4-214ENST00000535493 TENM3Q9P273 2699 aa8.97□□□□□ -0.97
HDAC4-214ENST00000535493 ZNF73O43830 326 aaPredicted RBP8.96□□□□□ -0.98
HDAC4-214ENST00000535493 DIRC1Q969H9 104 aa8.96□□□□□ -0.98
HDAC4-214ENST00000535493 TRAV7A0A075B6U4 112 aa8.96□□□□□ -0.98
HDAC4-214ENST00000535493 F8WEM9 126 aa8.96□□□□□ -0.98
HDAC4-214ENST00000535493 LYRM9A8MSI8 78 aa8.95□□□□□ -0.98
HDAC4-214ENST00000535493 A0A0J9YWU9 116 aa8.95□□□□□ -0.98
HDAC4-214ENST00000535493 IGHV4-30-4P0DP06 118 aa8.95□□□□□ -0.98
HDAC4-214ENST00000535493 FBN1P35555 2871 aaKnown RBP8.93□□□□□ -0.98
HDAC4-214ENST00000535493 NSD1Q96L73 2696 aaPredicted RBP8.93□□□□□ -0.98
HDAC4-214ENST00000535493 COX7BP24311 80 aa8.92□□□□□ -0.98
HDAC4-214ENST00000535493 DEFB105AQ8NG35 78 aa8.92□□□□□ -0.98
HDAC4-214ENST00000535493 C3orf84H3BNL1 204 aa8.91□□□□□ -0.98
HDAC4-214ENST00000535493 CSMD3Q7Z407 3707 aa8.91□□□□□ -0.98
HDAC4-214ENST00000535493 LELP1Q5T871 98 aa8.91□□□□□ -0.98
HDAC4-214ENST00000535493 WFDC10BQ8IUB3 73 aa8.91□□□□□ -0.98
HDAC4-214ENST00000535493 Q8NAQ8 132 aa8.91□□□□□ -0.98
HDAC4-214ENST00000535493 CAMK2N2Q96S95 79 aa8.91□□□□□ -0.98
HDAC4-214ENST00000535493 TRBV7-4A0A0J9YYF1 115 aa8.9□□□□□ -0.98
HDAC4-214ENST00000535493 BPY2O14599 106 aa8.9□□□□□ -0.98
HDAC4-214ENST00000535493 PRR34Q9NV39 138 aa8.89□□□□□ -0.99
HDAC4-214ENST00000535493 LINC00474Q9P2X8 69 aa8.89□□□□□ -0.99
HDAC4-214ENST00000535493 FLNBO75369 2602 aaKnown RBP8.89□□□□□ -0.99
HDAC4-214ENST00000535493 NDUFC2-KCTD14E9PQ53 114 aa8.89□□□□□ -0.99
HDAC4-214ENST00000535493 C9orf66Q5T8R8 295 aa8.89□□□□□ -0.99
HDAC4-214ENST00000535493 Q6ZRU5 148 aa8.89□□□□□ -0.99
HDAC4-214ENST00000535493 ELOF1P60002 83 aaKnown RBP8.89□□□□□ -0.99
HDAC4-214ENST00000535493 KLKP1Q107X0 134 aa8.89□□□□□ -0.99
HDAC4-214ENST00000535493 CXCL6P80162 114 aa8.88□□□□□ -0.99
HDAC4-214ENST00000535493 MAST4O15021 2626 aa8.88□□□□□ -0.99
HDAC4-214ENST00000535493 VPREB1P12018 145 aa8.88□□□□□ -0.99
HDAC4-214ENST00000535493 NOTCH1P46531 2555 aa8.87□□□□□ -0.99
HDAC4-214ENST00000535493 SPART-AS1P0CW21 52 aa8.87□□□□□ -0.99
HDAC4-214ENST00000535493 LINC00336Q6ZUF6 198 aa8.87□□□□□ -0.99
HDAC4-214ENST00000535493 NREPQ16612 68 aa8.86□□□□□ -0.99
HDAC4-214ENST00000535493 FP248Q71RG6 208 aaPredicted RBP8.85□□□□□ -0.99
HDAC4-214ENST00000535493 RETNQ9HD89 108 aa8.85□□□□□ -0.99
HDAC4-214ENST00000535493 SERP1Q9Y6X1 66 aa8.85□□□□□ -0.99
HDAC4-214ENST00000535493 PDE6GP18545 87 aa8.85□□□□□ -0.99
HDAC4-214ENST00000535493 APOC4P55056 127 aa8.84□□□□□ -0.99
HDAC4-214ENST00000535493 Q6ZRP5 223 aa8.84□□□□□ -0.99
HDAC4-214ENST00000535493 MIFP14174 115 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms