RNA–Protein interactions for RNA: ENST00000534788.1

UPK2-202, Transcript of uroplakin 2, humanhuman

TSL 3

Gene UPK2, Length 958 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2-202ENST00000534788 IFI27L1Q96BM0 104 aa8.33□□□□□ -1.08
UPK2-202ENST00000534788 PAM16Q9Y3D7 125 aa8.33□□□□□ -1.08
UPK2-202ENST00000534788 PRR3P79522 188 aaKnown RBP8.32□□□□□ -1.08
UPK2-202ENST00000534788 A0A1W2PNN7 141 aa8.31□□□□□ -1.08
UPK2-202ENST00000534788 PLNP26678 52 aa8.31□□□□□ -1.08
UPK2-202ENST00000534788 GAGE2EQ4V326 116 aa8.31□□□□□ -1.08
UPK2-202ENST00000534788 PRO1933Q9H354 126 aa8.31□□□□□ -1.08
UPK2-202ENST00000534788 GAGE2DQ9UEU5 116 aa8.31□□□□□ -1.08
UPK2-202ENST00000534788 CHTOPQ9Y3Y2 248 aaKnown RBP8.31□□□□□ -1.08
UPK2-202ENST00000534788 IGLV5-39A0A0G2JS06 123 aa8.3□□□□□ -1.08
UPK2-202ENST00000534788 SPINK8P0C7L1 97 aa8.3□□□□□ -1.08
UPK2-202ENST00000534788 ZNF22P17026 224 aaPredicted RBP8.3□□□□□ -1.08
UPK2-202ENST00000534788 COL5A1-AS1Q5SY13 56 aa8.3□□□□□ -1.08
UPK2-202ENST00000534788 SLC25A34Q6PIV7 304 aa8.3□□□□□ -1.08
UPK2-202ENST00000534788 BOD1L2Q8IYS8 172 aa8.3□□□□□ -1.08
UPK2-202ENST00000534788 DLEU1O43261 78 aa8.29□□□□□ -1.08
UPK2-202ENST00000534788 TMEM170BQ5T4T1 132 aa8.29□□□□□ -1.08
UPK2-202ENST00000534788 KRTAP9-2Q9BYQ4 174 aa8.28□□□□□ -1.08
UPK2-202ENST00000534788 C11orf86A6NJI1 115 aa8.27□□□□□ -1.09
UPK2-202ENST00000534788 COX17Q14061 63 aa8.27□□□□□ -1.09
UPK2-202ENST00000534788 SPINK6Q6UWN8 80 aa8.27□□□□□ -1.09
UPK2-202ENST00000534788 REG3GQ6UW15 175 aa8.26□□□□□ -1.09
UPK2-202ENST00000534788 M0QXV9 152 aa8.25□□□□□ -1.09
UPK2-202ENST00000534788 C9orf129Q5T035 196 aaKnown RBP8.25□□□□□ -1.09
UPK2-202ENST00000534788 FAM19A5Q7Z5A7 132 aaPredicted RBP8.25□□□□□ -1.09
UPK2-202ENST00000534788 TP73-AS1Q9UF72 201 aa8.25□□□□□ -1.09
UPK2-202ENST00000534788 DPM2O94777 84 aa8.24□□□□□ -1.09
UPK2-202ENST00000534788 COX8AP10176 69 aa8.24□□□□□ -1.09
UPK2-202ENST00000534788 SRSF9Q13242 221 aaKnown RBP eCLIP8.24□□□□□ -1.09
UPK2-202ENST00000534788 PHF5AQ7RTV0 110 aaKnown RBP8.24□□□□□ -1.09
UPK2-202ENST00000534788 TMEM223A0PJW6 202 aa8.23□□□□□ -1.09
UPK2-202ENST00000534788 FAM168BA1KXE4 195 aa8.23□□□□□ -1.09
UPK2-202ENST00000534788 UBE2BP63146 152 aa8.23□□□□□ -1.09
UPK2-202ENST00000534788 PSORS1C2Q9UIG4 136 aa8.23□□□□□ -1.09
UPK2-202ENST00000534788 IGKCP01834 107 aa8.22□□□□□ -1.09
UPK2-202ENST00000534788 C1orf137Q5JT78 98 aa8.21□□□□□ -1.1
UPK2-202ENST00000534788 SNHG12Q9BXW3 62 aa8.21□□□□□ -1.1
UPK2-202ENST00000534788 XAGE1AQ9HD64 81 aa8.21□□□□□ -1.1
UPK2-202ENST00000534788 ERG28Q9UKR5 140 aa8.21□□□□□ -1.1
UPK2-202ENST00000534788 MUC2Q02817 5179 aa8.21□□□□□ -1.1
UPK2-202ENST00000534788 A6NDN8 102 aa8.2□□□□□ -1.1
UPK2-202ENST00000534788 HERVK_113P61574 105 aa8.2□□□□□ -1.1
UPK2-202ENST00000534788 HERV-K104P63124 156 aa8.2□□□□□ -1.1
UPK2-202ENST00000534788 ZNF625Q96I27 306 aaPredicted RBP8.2□□□□□ -1.1
UPK2-202ENST00000534788 HIGD1BQ9P298 99 aa8.2□□□□□ -1.1
UPK2-202ENST00000534788 C22orf24Q9Y442 160 aa8.2□□□□□ -1.1
UPK2-202ENST00000534788 H0Y8G0 127 aa8.19□□□□□ -1.1
UPK2-202ENST00000534788 MRPL55Q7Z7F7 128 aaKnown RBP8.19□□□□□ -1.1
UPK2-202ENST00000534788 IGLV5-37A0A075B6J1 123 aa8.18□□□□□ -1.1
UPK2-202ENST00000534788 PFN2P35080 140 aa8.18□□□□□ -1.1
UPK2-202ENST00000534788 RPL24P83731 157 aaKnown RBP8.18□□□□□ -1.1
UPK2-202ENST00000534788 TAL2Q16559 108 aa8.18□□□□□ -1.1
UPK2-202ENST00000534788 KRTAP7-1Q8IUC3 87 aa8.18□□□□□ -1.1
UPK2-202ENST00000534788 IGLV7-43P04211 117 aa8.17□□□□□ -1.1
UPK2-202ENST00000534788 HSD52Q0P140 79 aa8.17□□□□□ -1.1
UPK2-202ENST00000534788 NKAPP1Q8N9T2 125 aa8.17□□□□□ -1.1
UPK2-202ENST00000534788 DIRC1Q969H9 104 aa8.17□□□□□ -1.1
UPK2-202ENST00000534788 PLEKHB2Q96CS7 222 aa8.17□□□□□ -1.1
UPK2-202ENST00000534788 MYMXA0A1B0GTQ4 84 aa8.16□□□□□ -1.1
UPK2-202ENST00000534788 NMUP48645 174 aa8.16□□□□□ -1.1
UPK2-202ENST00000534788 ATOH7Q8N100 152 aa8.16□□□□□ -1.1
UPK2-202ENST00000534788 LEPROTO15243 131 aa8.15□□□□□ -1.1
UPK2-202ENST00000534788 LINC00158P58513 81 aa8.15□□□□□ -1.1
UPK2-202ENST00000534788 SND1-IT1Q9HBX3 110 aa8.15□□□□□ -1.1
UPK2-202ENST00000534788 NDUFA12Q9UI09 145 aa8.14□□□□□ -1.11
UPK2-202ENST00000534788 KRTAP9-6A0A140TA67 174 aa8.13□□□□□ -1.11
UPK2-202ENST00000534788 TMEM238LA0A1B0GVL6 79 aa8.13□□□□□ -1.11
UPK2-202ENST00000534788 A6NJY4 79 aa8.13□□□□□ -1.11
UPK2-202ENST00000534788 MEIG1Q5JSS6 88 aa8.13□□□□□ -1.11
UPK2-202ENST00000534788 LINC00167Q96N53 147 aa8.12□□□□□ -1.11
UPK2-202ENST00000534788 H0Y9J4 135 aa8.11□□□□□ -1.11
UPK2-202ENST00000534788 J3QQQ9 107 aa8.11□□□□□ -1.11
UPK2-202ENST00000534788 ZNF861PO60384 105 aa8.11□□□□□ -1.11
UPK2-202ENST00000534788 BCE1O60756 84 aa8.11□□□□□ -1.11
UPK2-202ENST00000534788 LGALS3P17931 250 aaKnown RBP8.11□□□□□ -1.11
UPK2-202ENST00000534788 BATFQ16520 125 aa8.11□□□□□ -1.11
UPK2-202ENST00000534788 KRTAP11-1Q8IUC1 163 aa8.11□□□□□ -1.11
UPK2-202ENST00000534788 E9PLD3 99 aa8.1□□□□□ -1.11
UPK2-202ENST00000534788 VPREB1P12018 145 aa8.1□□□□□ -1.11
UPK2-202ENST00000534788 RPL28P46779 137 aaKnown RBP8.1□□□□□ -1.11
UPK2-202ENST00000534788 BVES-AS1Q5T3Y7 98 aa8.1□□□□□ -1.11
UPK2-202ENST00000534788 A0A1B0GV90 55 aa8.09□□□□□ -1.11
UPK2-202ENST00000534788 SMIM13P0DJ93 91 aa8.09□□□□□ -1.11
UPK2-202ENST00000534788 FAT4Q6V0I7 4981 aa8.09□□□□□ -1.11
UPK2-202ENST00000534788 IGKV2D-26A0A0A0MRZ7 120 aa8.08□□□□□ -1.12
UPK2-202ENST00000534788 A0A0U1RQV1 116 aa8.08□□□□□ -1.12
UPK2-202ENST00000534788 PRR26Q8N8Z3 221 aa8.08□□□□□ -1.12
UPK2-202ENST00000534788 IGLV1-50A0A075B6I6 118 aa8.07□□□□□ -1.12
UPK2-202ENST00000534788 RPL37AP8A6NKH3 93 aa8.07□□□□□ -1.12
UPK2-202ENST00000534788 HINT1P49773 126 aaPredicted RBP8.07□□□□□ -1.12
UPK2-202ENST00000534788 LCE2AQ5TA79 106 aaPredicted RBP8.07□□□□□ -1.12
UPK2-202ENST00000534788 LYRM7Q5U5X0 104 aa8.07□□□□□ -1.12
UPK2-202ENST00000534788 GTF2H5Q6ZYL4 71 aa8.07□□□□□ -1.12
UPK2-202ENST00000534788 MIR7-3HGQ8N6C7 128 aa8.07□□□□□ -1.12
UPK2-202ENST00000534788 COPS9Q8WXC6 57 aa8.07□□□□□ -1.12
UPK2-202ENST00000534788 LOC107984156A0A0G2JMH3 177 aa8.06□□□□□ -1.12
UPK2-202ENST00000534788 GAGE10A6NGK3 116 aa8.06□□□□□ -1.12
UPK2-202ENST00000534788 M0R378 163 aa8.06□□□□□ -1.12
UPK2-202ENST00000534788 ANKRD39Q53RE8 183 aa8.06□□□□□ -1.12
UPK2-202ENST00000534788 ARL17AQ8IVW1 177 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms