RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	PLA2G1B	P04054	148 aa	Known RBP	10.8	□□□□□ -0.68
NCAPD3-213	ENST00000534532	MOBP	Q13875	183 aa		10.8	□□□□□ -0.68
NCAPD3-213	ENST00000534532	DEFB116	Q30KQ4	102 aa		10.8	□□□□□ -0.68
NCAPD3-213	ENST00000534532	TRAV7	A0A075B6U4	112 aa		10.79	□□□□□ -0.68
NCAPD3-213	ENST00000534532	COX7C	P15954	63 aa		10.79	□□□□□ -0.68
NCAPD3-213	ENST00000534532	TRBV7-6	A0A0J9YX20	115 aa		10.79	□□□□□ -0.68
NCAPD3-213	ENST00000534532	PTPRB	P23467	1997 aa		10.78	□□□□□ -0.68
NCAPD3-213	ENST00000534532		J3QL48	77 aa		10.77	□□□□□ -0.68
NCAPD3-213	ENST00000534532		A6NED7	52 aa		10.77	□□□□□ -0.69
NCAPD3-213	ENST00000534532		K7EIL1	84 aa		10.77	□□□□□ -0.69
NCAPD3-213	ENST00000534532	KIAA0087	Q14695	138 aa		10.77	□□□□□ -0.69
NCAPD3-213	ENST00000534532	KLK9	Q2XQG4	91 aa		10.76	□□□□□ -0.69
NCAPD3-213	ENST00000534532	PHF5A	Q7RTV0	110 aa	Known RBP	10.76	□□□□□ -0.69
NCAPD3-213	ENST00000534532		Q8N3U1	123 aa		10.76	□□□□□ -0.69
NCAPD3-213	ENST00000534532	HCG22	E2RYF7	251 aa		10.75	□□□□□ -0.69
NCAPD3-213	ENST00000534532	TYMSOS	Q8TAI1	123 aa		10.75	□□□□□ -0.69
NCAPD3-213	ENST00000534532	HECTD1	Q9ULT8	2610 aa		10.75	□□□□□ -0.69
NCAPD3-213	ENST00000534532	DNAH10OS	P0CZ25	163 aa		10.74	□□□□□ -0.69
NCAPD3-213	ENST00000534532	PCOTH	Q58A44	107 aa		10.74	□□□□□ -0.69
NCAPD3-213	ENST00000534532	SPINK1	P00995	79 aa		10.74	□□□□□ -0.69
NCAPD3-213	ENST00000534532		H0Y9P7	68 aa		10.73	□□□□□ -0.69
NCAPD3-213	ENST00000534532	IGLV5-45	A0A087WSX0	123 aa		10.73	□□□□□ -0.69
NCAPD3-213	ENST00000534532	LINC01546	A6NGU7	62 aa		10.73	□□□□□ -0.69
NCAPD3-213	ENST00000534532	GVQW2	A0A096LPI5	108 aa	Predicted RBP	10.72	□□□□□ -0.69
NCAPD3-213	ENST00000534532	COL27A1	Q8IZC6	1860 aa	Predicted RBP	10.71	□□□□□ -0.69
NCAPD3-213	ENST00000534532		Q8NBF4	154 aa		10.71	□□□□□ -0.7
NCAPD3-213	ENST00000534532	IGKV2D-30	A0A075B6S6	120 aa		10.71	□□□□□ -0.7
NCAPD3-213	ENST00000534532	IGKV2-30	P06310	120 aa		10.71	□□□□□ -0.7
NCAPD3-213	ENST00000534532		A0A087WVE0	104 aa		10.7	□□□□□ -0.7
NCAPD3-213	ENST00000534532		A0A096LNT2	108 aa		10.7	□□□□□ -0.7
NCAPD3-213	ENST00000534532		Q6Q795	121 aa		10.7	□□□□□ -0.7
NCAPD3-213	ENST00000534532	KRTAP10-11	P60412	298 aa		10.69	□□□□□ -0.7
NCAPD3-213	ENST00000534532	RPL37A	P61513	92 aa	Known RBP	10.69	□□□□□ -0.7
NCAPD3-213	ENST00000534532		Q9UF83	564 aa		10.69	□□□□□ -0.7
NCAPD3-213	ENST00000534532	EPM2A	B3EWF7	344 aa		10.68	□□□□□ -0.7
NCAPD3-213	ENST00000534532	C19orf73	Q9NVV2	129 aa		10.68	□□□□□ -0.7
NCAPD3-213	ENST00000534532		Q6ZRX8	168 aa		10.67	□□□□□ -0.7
NCAPD3-213	ENST00000534532	CHTF8	P0CG12	524 aa		10.67	□□□□□ -0.7
NCAPD3-213	ENST00000534532	BCE1	O60756	84 aa		10.66	□□□□□ -0.7
NCAPD3-213	ENST00000534532	hDV103S1	A0JD37	113 aa		10.66	□□□□□ -0.7
NCAPD3-213	ENST00000534532	ELOF1	P60002	83 aa	Known RBP	10.66	□□□□□ -0.7
NCAPD3-213	ENST00000534532	TRBV7-7	A0A0K0K1E9	115 aa		10.65	□□□□□ -0.7
NCAPD3-213	ENST00000534532	MGAM2	Q2M2H8	2515 aa		10.65	□□□□□ -0.71
NCAPD3-213	ENST00000534532		A0A1B0GW54	56 aa		10.64	□□□□□ -0.71
NCAPD3-213	ENST00000534532	LINC00846	Q9NV44	126 aa		10.63	□□□□□ -0.71
NCAPD3-213	ENST00000534532	CXCL6	P80162	114 aa		10.63	□□□□□ -0.71
NCAPD3-213	ENST00000534532	CSNK1G2-AS1	Q8NCQ2	148 aa		10.62	□□□□□ -0.71
NCAPD3-213	ENST00000534532	TP53AIP1	Q9HCN2	124 aa		10.62	□□□□□ -0.71
NCAPD3-213	ENST00000534532	C1orf64	Q8NEQ6	169 aa		10.6	□□□□□ -0.71
NCAPD3-213	ENST00000534532	LINC00476	Q8WZB0	136 aa		10.59	□□□□□ -0.71
NCAPD3-213	ENST00000534532	CCDC179	H3BU77	68 aa		10.59	□□□□□ -0.71
NCAPD3-213	ENST00000534532	SMIM26	A0A096LP01	95 aa		10.59	□□□□□ -0.71
NCAPD3-213	ENST00000534532	LINC00313	P59037	77 aa		10.58	□□□□□ -0.72
NCAPD3-213	ENST00000534532	PCSK5	Q92824	1860 aa		10.58	□□□□□ -0.72
NCAPD3-213	ENST00000534532	KRTAP10-3	P60369	221 aa		10.58	□□□□□ -0.72
NCAPD3-213	ENST00000534532	C7orf65	Q6ZTY9	151 aa		10.58	□□□□□ -0.72
NCAPD3-213	ENST00000534532	TMEM254	Q8TBM7	123 aa		10.57	□□□□□ -0.72
NCAPD3-213	ENST00000534532	USP24	Q9UPU5	2620 aa		10.57	□□□□□ -0.72
NCAPD3-213	ENST00000534532	ATP11AUN	Q6ZP68	121 aa		10.56	□□□□□ -0.72
NCAPD3-213	ENST00000534532	LINC00336	Q6ZUF6	198 aa		10.56	□□□□□ -0.72
NCAPD3-213	ENST00000534532	TM2D3	Q9BRN9	247 aa		10.56	□□□□□ -0.72
NCAPD3-213	ENST00000534532	SOSTDC1	Q6X4U4	206 aa		10.56	□□□□□ -0.72
NCAPD3-213	ENST00000534532	ST20-AS1	Q8NBB2	130 aa		10.53	□□□□□ -0.72
NCAPD3-213	ENST00000534532		A0A0U1RQV1	116 aa		10.53	□□□□□ -0.72
NCAPD3-213	ENST00000534532	SMIM29	Q86T20	159 aa		10.52	□□□□□ -0.73
NCAPD3-213	ENST00000534532	VPREB1	P12018	145 aa		10.52	□□□□□ -0.73
NCAPD3-213	ENST00000534532	KRTAP1-3	Q8IUG1	177 aa		10.52	□□□□□ -0.73
NCAPD3-213	ENST00000534532		A0A087WTM6	91 aa		10.51	□□□□□ -0.73
NCAPD3-213	ENST00000534532		Q96NJ1	140 aa		10.5	□□□□□ -0.73
NCAPD3-213	ENST00000534532	FAM168B	A1KXE4	195 aa		10.49	□□□□□ -0.73
NCAPD3-213	ENST00000534532	PRR34	Q9NV39	138 aa		10.47	□□□□□ -0.73
NCAPD3-213	ENST00000534532	FAM218A	Q96MZ4	157 aa		10.47	□□□□□ -0.73
NCAPD3-213	ENST00000534532	KRTAP1-1	Q07627	177 aa		10.47	□□□□□ -0.73
NCAPD3-213	ENST00000534532	SPAG11A	Q6PDA7	123 aa		10.47	□□□□□ -0.73
NCAPD3-213	ENST00000534532	IGLV1-50	A0A075B6I6	118 aa		10.46	□□□□□ -0.73
NCAPD3-213	ENST00000534532	ACYP2	P14621	99 aa		10.46	□□□□□ -0.73
NCAPD3-213	ENST00000534532	C8orf87	E5RJ46	101 aa		10.46	□□□□□ -0.74
NCAPD3-213	ENST00000534532	GIG44	P09565	113 aa	Predicted RBP	10.45	□□□□□ -0.74
NCAPD3-213	ENST00000534532	COX6B2	Q6YFQ2	88 aa		10.45	□□□□□ -0.74
NCAPD3-213	ENST00000534532	LOC110117498	A0A087WWA1	95 aa		10.45	□□□□□ -0.74
NCAPD3-213	ENST00000534532	IGLV6-57	P01721	117 aa		10.45	□□□□□ -0.74
NCAPD3-213	ENST00000534532	SERTAD4-AS1	Q5TG53	156 aa		10.45	□□□□□ -0.74
NCAPD3-213	ENST00000534532	LINC00612	Q8N6U2	182 aa		10.44	□□□□□ -0.74
NCAPD3-213	ENST00000534532	MAST4	O15021	2626 aa		10.44	□□□□□ -0.74
NCAPD3-213	ENST00000534532	LINC00304	Q8N9R0	145 aa		10.44	□□□□□ -0.74
NCAPD3-213	ENST00000534532		Q6ZQT0	140 aa		10.44	□□□□□ -0.74
NCAPD3-213	ENST00000534532	C9orf163	Q8N9P6	203 aa		10.44	□□□□□ -0.74
NCAPD3-213	ENST00000534532	ZNF861P	O60384	105 aa		10.44	□□□□□ -0.74
NCAPD3-213	ENST00000534532	CDIP1	Q9H305	208 aa		10.44	□□□□□ -0.74
NCAPD3-213	ENST00000534532	TRBV7-4	A0A0J9YYF1	115 aa		10.43	□□□□□ -0.74
NCAPD3-213	ENST00000534532	SMR3B	P02814	79 aa	Predicted RBP	10.43	□□□□□ -0.74
NCAPD3-213	ENST00000534532	SSBP3-AS1	Q7Z2R9	100 aa		10.43	□□□□□ -0.74
NCAPD3-213	ENST00000534532	KCNQ1DN	Q9H478	68 aa		10.43	□□□□□ -0.74
NCAPD3-213	ENST00000534532	HELZ2	Q9BYK8	2649 aa	Known RBP	10.43	□□□□□ -0.74
NCAPD3-213	ENST00000534532	APLN	Q9ULZ1	77 aa		10.42	□□□□□ -0.74
NCAPD3-213	ENST00000534532		H3BPC8	53 aa		10.41	□□□□□ -0.74
NCAPD3-213	ENST00000534532	C15orf56	Q8N910	161 aa		10.4	□□□□□ -0.74
NCAPD3-213	ENST00000534532	ATR	Q13535	2644 aa		10.39	□□□□□ -0.75
NCAPD3-213	ENST00000534532	TRAV22	A0A0B4J277	110 aa		10.39	□□□□□ -0.75
NCAPD3-213	ENST00000534532		A0A1B0GU69	56 aa		10.37	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms