RNA–Protein interactions for RNA: ENST00000534390.2

PAX6-230, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-230ENST00000534390 HIST1H2BNQ99877 126 aa9.67□□□□□ -0.86
PAX6-230ENST00000534390 HIST1H2BMQ99879 126 aa9.67□□□□□ -0.86
PAX6-230ENST00000534390 MAP1LC3CQ9BXW4 147 aa9.67□□□□□ -0.86
PAX6-230ENST00000534390 DPM2O94777 84 aa9.66□□□□□ -0.86
PAX6-230ENST00000534390 IGLV5-37A0A075B6J1 123 aa9.65□□□□□ -0.86
PAX6-230ENST00000534390 IGKV2-28A0A075B6P5 120 aa9.65□□□□□ -0.86
PAX6-230ENST00000534390 IGKV2D-28P01615 120 aa9.65□□□□□ -0.86
PAX6-230ENST00000534390 HERVK_113P61574 105 aa9.65□□□□□ -0.86
PAX6-230ENST00000534390 NDUFA12Q9UI09 145 aa9.65□□□□□ -0.86
PAX6-230ENST00000534390 IGKCP01834 107 aa9.64□□□□□ -0.87
PAX6-230ENST00000534390 SMIM13P0DJ93 91 aa9.64□□□□□ -0.87
PAX6-230ENST00000534390 RPL24P83731 157 aaKnown RBP9.64□□□□□ -0.87
PAX6-230ENST00000534390 MYMXA0A1B0GTQ4 84 aa9.63□□□□□ -0.87
PAX6-230ENST00000534390 BCE1O60756 84 aa9.63□□□□□ -0.87
PAX6-230ENST00000534390 LEPROTO15243 131 aa9.62□□□□□ -0.87
PAX6-230ENST00000534390 ZNF861PO60384 105 aa9.62□□□□□ -0.87
PAX6-230ENST00000534390 VPREB1P12018 145 aa9.62□□□□□ -0.87
PAX6-230ENST00000534390 HERV-K104P63124 156 aa9.62□□□□□ -0.87
PAX6-230ENST00000534390 PLEKHB2Q96CS7 222 aa9.62□□□□□ -0.87
PAX6-230ENST00000534390 RPL28P46779 137 aaKnown RBP9.61□□□□□ -0.87
PAX6-230ENST00000534390 UBE2AP49459 152 aa9.61□□□□□ -0.87
PAX6-230ENST00000534390 TSPEAR-AS2P59090 65 aa9.61□□□□□ -0.87
PAX6-230ENST00000534390 LGALS3P17931 250 aaKnown RBP9.6□□□□□ -0.87
PAX6-230ENST00000534390 KRTAP10-8P60410 259 aa9.6□□□□□ -0.87
PAX6-230ENST00000534390 MIR7-3HGQ8N6C7 128 aa9.6□□□□□ -0.87
PAX6-230ENST00000534390 PRR26Q8N8Z3 221 aa9.6□□□□□ -0.87
PAX6-230ENST00000534390 J3QQQ9 107 aa9.59□□□□□ -0.87
PAX6-230ENST00000534390 BOD1L2Q8IYS8 172 aa9.59□□□□□ -0.87
PAX6-230ENST00000534390 Q8NDZ9 215 aa9.59□□□□□ -0.87
PAX6-230ENST00000534390 LINC00587B1AMM8 73 aa9.58□□□□□ -0.88
PAX6-230ENST00000534390 SYS1-DBNDD2H3BUS1 97 aa9.58□□□□□ -0.88
PAX6-230ENST00000534390 IGLV1-50A0A075B6I6 118 aa9.57□□□□□ -0.88
PAX6-230ENST00000534390 TMEM238C9JI98 176 aa9.57□□□□□ -0.88
PAX6-230ENST00000534390 TNXBP22105 4242 aa9.57□□□□□ -0.88
PAX6-230ENST00000534390 NCR3O14931 201 aa9.56□□□□□ -0.88
PAX6-230ENST00000534390 FAM19A1Q7Z5A9 133 aa9.56□□□□□ -0.88
PAX6-230ENST00000534390 DAND5Q8N907 189 aa9.56□□□□□ -0.88
PAX6-230ENST00000534390 KRTAP1-4P0C5Y4 121 aa9.55□□□□□ -0.88
PAX6-230ENST00000534390 NMUP48645 174 aa9.55□□□□□ -0.88
PAX6-230ENST00000534390 PRLHP81277 87 aa9.55□□□□□ -0.88
PAX6-230ENST00000534390 TMEM126AQ9H061 195 aa9.55□□□□□ -0.88
PAX6-230ENST00000534390 M0R378 163 aa9.54□□□□□ -0.88
PAX6-230ENST00000534390 KRTDAPP60985 99 aa9.54□□□□□ -0.88
PAX6-230ENST00000534390 PET117Q6UWS5 81 aa9.53□□□□□ -0.88
PAX6-230ENST00000534390 LINC01545Q5VT33 79 aa9.52□□□□□ -0.89
PAX6-230ENST00000534390 MIEN1Q9BRT3 115 aa9.52□□□□□ -0.89
PAX6-230ENST00000534390 HMCN2Q8NDA2 5059 aa9.52□□□□□ -0.89
PAX6-230ENST00000534390 E9PLD3 99 aa9.51□□□□□ -0.89
PAX6-230ENST00000534390 C3orf79P0CE67 100 aa9.51□□□□□ -0.89
PAX6-230ENST00000534390 S100A1P23297 94 aa9.51□□□□□ -0.89
PAX6-230ENST00000534390 RPL13AP40429 203 aaKnown RBP9.51□□□□□ -0.89
PAX6-230ENST00000534390 NPC2P61916 151 aa9.5□□□□□ -0.89
PAX6-230ENST00000534390 COA6Q5JTJ3 125 aaKnown RBP9.5□□□□□ -0.89
PAX6-230ENST00000534390 KRTAP13-1Q8IUC0 172 aa9.49□□□□□ -0.89
PAX6-230ENST00000534390 A0A0J9YXY3 114 aa9.48□□□□□ -0.89
PAX6-230ENST00000534390 C20orf202A1L168 122 aa9.48□□□□□ -0.89
PAX6-230ENST00000534390 ANAPC11Q9NYG5 84 aa9.48□□□□□ -0.89
PAX6-230ENST00000534390 IGKV2D-26A0A0A0MRZ7 120 aa9.47□□□□□ -0.89
PAX6-230ENST00000534390 HIGD2AQ9BW72 106 aa9.47□□□□□ -0.89
PAX6-230ENST00000534390 TRBV10-3A0A0K0K1G6 114 aa9.46□□□□□ -0.9
PAX6-230ENST00000534390 PRYO14603 147 aa9.46□□□□□ -0.9
PAX6-230ENST00000534390 S100A12P80511 92 aa9.46□□□□□ -0.9
PAX6-230ENST00000534390 ZNF815PA8K554 130 aa9.45□□□□□ -0.9
PAX6-230ENST00000534390 CRYGAP11844 174 aa9.45□□□□□ -0.9
PAX6-230ENST00000534390 A0A087X002 238 aa9.44□□□□□ -0.9
PAX6-230ENST00000534390 ETDCA0A1B0GVM5 59 aa9.44□□□□□ -0.9
PAX6-230ENST00000534390 ADAMTSL4-AS1Q5T5F5 129 aa9.44□□□□□ -0.9
PAX6-230ENST00000534390 ATOH7Q8N100 152 aa9.44□□□□□ -0.9
PAX6-230ENST00000534390 SPANXB1Q9NS25 103 aaPredicted RBP9.44□□□□□ -0.9
PAX6-230ENST00000534390 DDTP30046 118 aa9.43□□□□□ -0.9
PAX6-230ENST00000534390 S100A7L2Q5SY68 101 aa9.43□□□□□ -0.9
PAX6-230ENST00000534390 TYMSOSQ8TAI1 123 aa9.43□□□□□ -0.9
PAX6-230ENST00000534390 TTTY13Q9BZ97 58 aa9.43□□□□□ -0.9
PAX6-230ENST00000534390 LOC107984156A0A0G2JMH3 177 aa9.42□□□□□ -0.9
PAX6-230ENST00000534390 S100A2P29034 98 aa9.42□□□□□ -0.9
PAX6-230ENST00000534390 ARL17AQ8IVW1 177 aa9.42□□□□□ -0.9
PAX6-230ENST00000534390 KCNQ1DNQ9H478 68 aa9.42□□□□□ -0.9
PAX6-230ENST00000534390 TRBV10-2A0A0K0K1G8 114 aa9.41□□□□□ -0.9
PAX6-230ENST00000534390 SOSTDC1Q6X4U4 206 aa9.41□□□□□ -0.9
PAX6-230ENST00000534390 EIF4EBP3O60516 100 aaPredicted RBP9.39□□□□□ -0.91
PAX6-230ENST00000534390 NDUFC2O95298 119 aa9.39□□□□□ -0.91
PAX6-230ENST00000534390 TSPAN13O95857 204 aa9.39□□□□□ -0.91
PAX6-230ENST00000534390 S100A6P06703 90 aa9.39□□□□□ -0.91
PAX6-230ENST00000534390 SCGB1D4Q6XE38 83 aa9.39□□□□□ -0.91
PAX6-230ENST00000534390 LINC00337Q8N6G1 96 aa9.39□□□□□ -0.91
PAX6-230ENST00000534390 FAM229BQ4G0N7 80 aa9.38□□□□□ -0.91
PAX6-230ENST00000534390 ANKRD39Q53RE8 183 aa9.38□□□□□ -0.91
PAX6-230ENST00000534390 HIST3H2BBQ8N257 126 aa9.38□□□□□ -0.91
PAX6-230ENST00000534390 LINC00308Q8TCZ7 52 aa9.38□□□□□ -0.91
PAX6-230ENST00000534390 TIMM17BO60830 172 aa9.37□□□□□ -0.91
PAX6-230ENST00000534390 SPRR1AP35321 89 aa9.37□□□□□ -0.91
PAX6-230ENST00000534390 KRTAP13-2Q52LG2 175 aa9.37□□□□□ -0.91
PAX6-230ENST00000534390 LITAFQ99732 161 aa9.37□□□□□ -0.91
PAX6-230ENST00000534390 ZNF706Q9Y5V0 76 aaPredicted RBP9.37□□□□□ -0.91
PAX6-230ENST00000534390 AKR1D1P51857 326 aa9.36□□□□□ -0.91
PAX6-230ENST00000534390 OR13C6PQ8NH95 151 aa9.36□□□□□ -0.91
PAX6-230ENST00000534390 HIST1H2BLQ99880 126 aa9.36□□□□□ -0.91
PAX6-230ENST00000534390 TRAV23DV6A0A075B6W5 121 aa9.35□□□□□ -0.91
PAX6-230ENST00000534390 SMCR5Q8TEV8 140 aa9.35□□□□□ -0.91
PAX6-230ENST00000534390 SPRR4Q96PI1 79 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms