RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 GAGE10A6NGK3 116 aa8.38□□□□□ -1.07
SF3B2-215ENST00000534307 RPL37AP8A6NKH3 93 aa8.38□□□□□ -1.07
SF3B2-215ENST00000534307 PFN2P35080 140 aa8.38□□□□□ -1.07
SF3B2-215ENST00000534307 ZNF625Q96I27 306 aaPredicted RBP8.38□□□□□ -1.07
SF3B2-215ENST00000534307 ERG28Q9UKR5 140 aa8.38□□□□□ -1.07
SF3B2-215ENST00000534307 KRTAP9-6A0A140TA67 174 aa8.37□□□□□ -1.07
SF3B2-215ENST00000534307 COX17Q14061 63 aa8.37□□□□□ -1.07
SF3B2-215ENST00000534307 TMEM170BQ5T4T1 132 aa8.37□□□□□ -1.07
SF3B2-215ENST00000534307 KRTAP13-1Q8IUC0 172 aa8.37□□□□□ -1.07
SF3B2-215ENST00000534307 SND1-IT1Q9HBX3 110 aa8.37□□□□□ -1.07
SF3B2-215ENST00000534307 VPREB1P12018 145 aa8.36□□□□□ -1.07
SF3B2-215ENST00000534307 RPL13AP40429 203 aaKnown RBP8.36□□□□□ -1.07
SF3B2-215ENST00000534307 RPL28P46779 137 aaKnown RBP8.36□□□□□ -1.07
SF3B2-215ENST00000534307 NKAPP1Q8N9T2 125 aa8.36□□□□□ -1.07
SF3B2-215ENST00000534307 Q8NDZ9 215 aa8.36□□□□□ -1.07
SF3B2-215ENST00000534307 CHTOPQ9Y3Y2 248 aaKnown RBP8.36□□□□□ -1.07
SF3B2-215ENST00000534307 SFTA2Q6UW10 78 aa8.35□□□□□ -1.07
SF3B2-215ENST00000534307 TMEM223A0PJW6 202 aa8.34□□□□□ -1.07
SF3B2-215ENST00000534307 COA6Q5JTJ3 125 aaKnown RBP8.34□□□□□ -1.07
SF3B2-215ENST00000534307 MAP1LC3CQ9BXW4 147 aa8.33□□□□□ -1.08
SF3B2-215ENST00000534307 IGKV2-28A0A075B6P5 120 aa8.32□□□□□ -1.08
SF3B2-215ENST00000534307 A0A087X002 238 aa8.32□□□□□ -1.08
SF3B2-215ENST00000534307 IGKV2D-28P01615 120 aa8.32□□□□□ -1.08
SF3B2-215ENST00000534307 FABP4P15090 132 aa8.32□□□□□ -1.08
SF3B2-215ENST00000534307 PLNP26678 52 aa8.31□□□□□ -1.08
SF3B2-215ENST00000534307 RPL24P83731 157 aaKnown RBP8.3□□□□□ -1.08
SF3B2-215ENST00000534307 TMEM238C9JI98 176 aa8.28□□□□□ -1.08
SF3B2-215ENST00000534307 H0Y8G0 127 aa8.28□□□□□ -1.08
SF3B2-215ENST00000534307 M0R378 163 aa8.28□□□□□ -1.08
SF3B2-215ENST00000534307 UBE2AP49459 152 aa8.28□□□□□ -1.08
SF3B2-215ENST00000534307 TMEM126AQ9H061 195 aa8.28□□□□□ -1.08
SF3B2-215ENST00000534307 DPM2O94777 84 aa8.27□□□□□ -1.09
SF3B2-215ENST00000534307 CRYGAP11844 174 aa8.27□□□□□ -1.09
SF3B2-215ENST00000534307 LINC00158P58513 81 aa8.27□□□□□ -1.09
SF3B2-215ENST00000534307 ANAPC11Q9NYG5 84 aa8.27□□□□□ -1.09
SF3B2-215ENST00000534307 PRLHP81277 87 aa8.26□□□□□ -1.09
SF3B2-215ENST00000534307 KRTAP13-2Q52LG2 175 aa8.26□□□□□ -1.09
SF3B2-215ENST00000534307 A0A0U1RRA0 63 aa8.25□□□□□ -1.09
SF3B2-215ENST00000534307 SYS1-DBNDD2H3BUS1 97 aa8.25□□□□□ -1.09
SF3B2-215ENST00000534307 IGKCP01834 107 aa8.25□□□□□ -1.09
SF3B2-215ENST00000534307 SMIM13P0DJ93 91 aa8.25□□□□□ -1.09
SF3B2-215ENST00000534307 AKR1D1P51857 326 aa8.25□□□□□ -1.09
SF3B2-215ENST00000534307 TSPEAR-AS2P59090 65 aa8.25□□□□□ -1.09
SF3B2-215ENST00000534307 HERVK_113P61574 105 aa8.25□□□□□ -1.09
SF3B2-215ENST00000534307 FAM229BQ4G0N7 80 aa8.25□□□□□ -1.09
SF3B2-215ENST00000534307 PET117Q6UWS5 81 aa8.25□□□□□ -1.09
SF3B2-215ENST00000534307 PMCHL2Q9BQD1 86 aa8.25□□□□□ -1.09
SF3B2-215ENST00000534307 S100A6P06703 90 aa8.24□□□□□ -1.09
SF3B2-215ENST00000534307 HERV-K104P63124 156 aa8.24□□□□□ -1.09
SF3B2-215ENST00000534307 FAM19A1Q7Z5A9 133 aa8.24□□□□□ -1.09
SF3B2-215ENST00000534307 TYMSOSQ8TAI1 123 aa8.24□□□□□ -1.09
SF3B2-215ENST00000534307 MIR7-3HGQ8N6C7 128 aa8.23□□□□□ -1.09
SF3B2-215ENST00000534307 NDUFA12Q9UI09 145 aa8.23□□□□□ -1.09
SF3B2-215ENST00000534307 C20orf202A1L168 122 aa8.22□□□□□ -1.09
SF3B2-215ENST00000534307 LINC00587B1AMM8 73 aa8.22□□□□□ -1.09
SF3B2-215ENST00000534307 MEIG1Q5JSS6 88 aa8.22□□□□□ -1.09
SF3B2-215ENST00000534307 PLEKHB2Q96CS7 222 aa8.22□□□□□ -1.09
SF3B2-215ENST00000534307 S100A2P29034 98 aa8.21□□□□□ -1.1
SF3B2-215ENST00000534307 LCE2AQ5TA79 106 aaPredicted RBP8.21□□□□□ -1.1
SF3B2-215ENST00000534307 LINC01545Q5VT33 79 aa8.21□□□□□ -1.1
SF3B2-215ENST00000534307 BOD1L2Q8IYS8 172 aa8.21□□□□□ -1.1
SF3B2-215ENST00000534307 MYMXA0A1B0GTQ4 84 aa8.2□□□□□ -1.1
SF3B2-215ENST00000534307 LEPROTO15243 131 aa8.2□□□□□ -1.1
SF3B2-215ENST00000534307 TSPAN13O95857 204 aa8.2□□□□□ -1.1
SF3B2-215ENST00000534307 C3orf79P0CE67 100 aa8.2□□□□□ -1.1
SF3B2-215ENST00000534307 PRR4Q16378 134 aa8.2□□□□□ -1.1
SF3B2-215ENST00000534307 IGKV2D-26A0A0A0MRZ7 120 aa8.19□□□□□ -1.1
SF3B2-215ENST00000534307 LOC107984156A0A0G2JMH3 177 aa8.19□□□□□ -1.1
SF3B2-215ENST00000534307 SPRR1AP35321 89 aa8.19□□□□□ -1.1
SF3B2-215ENST00000534307 NMUP48645 174 aa8.19□□□□□ -1.1
SF3B2-215ENST00000534307 KRTDAPP60985 99 aa8.19□□□□□ -1.1
SF3B2-215ENST00000534307 ARL17AQ8IVW1 177 aa8.19□□□□□ -1.1
SF3B2-215ENST00000534307 KRTAP4-16G5E9R7 235 aaPredicted RBP8.18□□□□□ -1.1
SF3B2-215ENST00000534307 PRYO14603 147 aa8.18□□□□□ -1.1
SF3B2-215ENST00000534307 KCNQ1DNQ9H478 68 aa8.18□□□□□ -1.1
SF3B2-215ENST00000534307 J3QQQ9 107 aa8.17□□□□□ -1.1
SF3B2-215ENST00000534307 NCR3O14931 201 aa8.17□□□□□ -1.1
SF3B2-215ENST00000534307 LGALS3P17931 250 aaKnown RBP8.17□□□□□ -1.1
SF3B2-215ENST00000534307 HIST3H2BBQ8N257 126 aa8.17□□□□□ -1.1
SF3B2-215ENST00000534307 E9PLD3 99 aa8.16□□□□□ -1.1
SF3B2-215ENST00000534307 LINC00337Q8N6G1 96 aa8.16□□□□□ -1.1
SF3B2-215ENST00000534307 HIGD2AQ9BW72 106 aa8.16□□□□□ -1.1
SF3B2-215ENST00000534307 A0A0U1RQV1 116 aa8.15□□□□□ -1.1
SF3B2-215ENST00000534307 DAND5Q8N907 189 aa8.15□□□□□ -1.1
SF3B2-215ENST00000534307 LINC00304Q8N9R0 145 aa8.15□□□□□ -1.1
SF3B2-215ENST00000534307 SPRR4Q96PI1 79 aa8.15□□□□□ -1.1
SF3B2-215ENST00000534307 HIST1H2BLQ99880 126 aa8.15□□□□□ -1.1
SF3B2-215ENST00000534307 TRBV10-3A0A0K0K1G6 114 aa8.14□□□□□ -1.11
SF3B2-215ENST00000534307 SNRPEP62304 92 aaKnown RBP8.14□□□□□ -1.11
SF3B2-215ENST00000534307 C3orf22Q8N5N4 141 aa8.14□□□□□ -1.11
SF3B2-215ENST00000534307 TRBV10-2A0A0K0K1G8 114 aa8.13□□□□□ -1.11
SF3B2-215ENST00000534307 C5orf52A6NGY3 159 aa8.12□□□□□ -1.11
SF3B2-215ENST00000534307 CTAG1AP78358 180 aa8.12□□□□□ -1.11
SF3B2-215ENST00000534307 SMCR5Q8TEV8 140 aa8.11□□□□□ -1.11
SF3B2-215ENST00000534307 EIF4EBP3O60516 100 aaPredicted RBP8.1□□□□□ -1.11
SF3B2-215ENST00000534307 NDUFC2O95298 119 aa8.1□□□□□ -1.11
SF3B2-215ENST00000534307 ADAMTSL4-AS1Q5T5F5 129 aa8.1□□□□□ -1.11
SF3B2-215ENST00000534307 SOSTDC1Q6X4U4 206 aa8.1□□□□□ -1.11
SF3B2-215ENST00000534307 ZNF706Q9Y5V0 76 aaPredicted RBP8.1□□□□□ -1.11
SF3B2-215ENST00000534307 A0A0J9YXY3 114 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms