RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 ERG28Q9UKR5 140 aa5.25□□□□□ -1.57
COPB1-211ENST00000534234 C11orf86A6NJI1 115 aa5.25□□□□□ -1.57
COPB1-211ENST00000534234 APOC3P02656 99 aa5.25□□□□□ -1.57
COPB1-211ENST00000534234 RPL24P83731 157 aaKnown RBP5.25□□□□□ -1.57
COPB1-211ENST00000534234 COX17Q14061 63 aa5.25□□□□□ -1.57
COPB1-211ENST00000534234 TMEM170BQ5T4T1 132 aa5.25□□□□□ -1.57
COPB1-211ENST00000534234 VPREB1P12018 145 aa5.24□□□□□ -1.57
COPB1-211ENST00000534234 SNAPINO95295 136 aa5.23□□□□□ -1.57
COPB1-211ENST00000534234 SFTA2Q6UW10 78 aa5.23□□□□□ -1.57
COPB1-211ENST00000534234 FAM19A1Q7Z5A9 133 aa5.23□□□□□ -1.57
COPB1-211ENST00000534234 TMEM126AQ9H061 195 aa5.23□□□□□ -1.57
COPB1-211ENST00000534234 CHTOPQ9Y3Y2 248 aaKnown RBP5.23□□□□□ -1.57
COPB1-211ENST00000534234 TMEM238C9JI98 176 aa5.22□□□□□ -1.57
COPB1-211ENST00000534234 PRLHP81277 87 aa5.22□□□□□ -1.57
COPB1-211ENST00000534234 NDUFA5Q16718 116 aa5.22□□□□□ -1.57
COPB1-211ENST00000534234 KRTAP13-2Q52LG2 175 aa5.22□□□□□ -1.57
COPB1-211ENST00000534234 SVBPQ8N300 66 aa5.22□□□□□ -1.57
COPB1-211ENST00000534234 LINC00158P58513 81 aa5.21□□□□□ -1.57
COPB1-211ENST00000534234 FAM229BQ4G0N7 80 aa5.21□□□□□ -1.57
COPB1-211ENST00000534234 Q8NDZ9 215 aa5.21□□□□□ -1.57
COPB1-211ENST00000534234 IGKV2D-26A0A0A0MRZ7 120 aa5.21□□□□□ -1.58
COPB1-211ENST00000534234 A0A0U1RRA0 63 aa5.21□□□□□ -1.58
COPB1-211ENST00000534234 M0R378 163 aa5.21□□□□□ -1.58
COPB1-211ENST00000534234 TMEM223A0PJW6 202 aa5.2□□□□□ -1.58
COPB1-211ENST00000534234 IFI27L1Q96BM0 104 aa5.2□□□□□ -1.58
COPB1-211ENST00000534234 CHCHD1Q96BP2 118 aaKnown RBP5.2□□□□□ -1.58
COPB1-211ENST00000534234 PLEKHB2Q96CS7 222 aa5.2□□□□□ -1.58
COPB1-211ENST00000534234 TRAV12-1A0A0B4J245 112 aa5.19□□□□□ -1.58
COPB1-211ENST00000534234 ATP6V1G1O75348 118 aa5.19□□□□□ -1.58
COPB1-211ENST00000534234 CBLN2Q8IUK8 224 aa5.19□□□□□ -1.58
COPB1-211ENST00000534234 LINC00304Q8N9R0 145 aa5.19□□□□□ -1.58
COPB1-211ENST00000534234 C21orf62-AS1Q17RA5 79 aa5.18□□□□□ -1.58
COPB1-211ENST00000534234 YPEL4Q96NS1 127 aa5.18□□□□□ -1.58
COPB1-211ENST00000534234 HIGD2AQ9BW72 106 aa5.18□□□□□ -1.58
COPB1-211ENST00000534234 SMIM13P0DJ93 91 aa5.17□□□□□ -1.58
COPB1-211ENST00000534234 RETNLBQ9BQ08 111 aa5.17□□□□□ -1.58
COPB1-211ENST00000534234 HSBP1O75506 76 aa5.16□□□□□ -1.58
COPB1-211ENST00000534234 MEIG1Q5JSS6 88 aa5.16□□□□□ -1.58
COPB1-211ENST00000534234 BOD1L2Q8IYS8 172 aa5.16□□□□□ -1.58
COPB1-211ENST00000534234 FAM19A2Q8N3H0 131 aa5.16□□□□□ -1.58
COPB1-211ENST00000534234 HERV-K104P63124 156 aa5.16□□□□□ -1.58
COPB1-211ENST00000534234 ANKRD39Q53RE8 183 aa5.16□□□□□ -1.58
COPB1-211ENST00000534234 C3orf22Q8N5N4 141 aa5.16□□□□□ -1.58
COPB1-211ENST00000534234 MIR7-3HGQ8N6C7 128 aa5.16□□□□□ -1.58
COPB1-211ENST00000534234 LINC00587B1AMM8 73 aa5.15□□□□□ -1.59
COPB1-211ENST00000534234 CTAG1AP78358 180 aa5.15□□□□□ -1.59
COPB1-211ENST00000534234 NDUFA12Q9UI09 145 aa5.15□□□□□ -1.59
COPB1-211ENST00000534234 MUC2Q02817 5179 aa5.14□□□□□ -1.59
COPB1-211ENST00000534234 MYMXA0A1B0GTQ4 84 aa5.14□□□□□ -1.59
COPB1-211ENST00000534234 H0Y8G0 127 aa5.14□□□□□ -1.59
COPB1-211ENST00000534234 SPRR4Q96PI1 79 aa5.14□□□□□ -1.59
COPB1-211ENST00000534234 IGLV7-46A0A075B6I9 117 aa5.13□□□□□ -1.59
COPB1-211ENST00000534234 PRYO14603 147 aa5.13□□□□□ -1.59
COPB1-211ENST00000534234 NCR3O14931 201 aa5.13□□□□□ -1.59
COPB1-211ENST00000534234 LEPROTL1O95214 131 aa5.13□□□□□ -1.59
COPB1-211ENST00000534234 TRGC2P03986 189 aa5.13□□□□□ -1.59
COPB1-211ENST00000534234 MAP1LC3CQ9BXW4 147 aa5.13□□□□□ -1.59
COPB1-211ENST00000534234 KCNQ1DNQ9H478 68 aa5.13□□□□□ -1.59
COPB1-211ENST00000534234 SPRR1AP35321 89 aa5.12□□□□□ -1.59
COPB1-211ENST00000534234 SPAG11AQ6PDA7 123 aa5.12□□□□□ -1.59
COPB1-211ENST00000534234 LINC00337Q8N6G1 96 aa5.12□□□□□ -1.59
COPB1-211ENST00000534234 SMCR5Q8TEV8 140 aa5.12□□□□□ -1.59
COPB1-211ENST00000534234 CDIP1Q9H305 208 aa5.12□□□□□ -1.59
COPB1-211ENST00000534234 ZNF706Q9Y5V0 76 aaPredicted RBP5.12□□□□□ -1.59
COPB1-211ENST00000534234 TRBV10-3A0A0K0K1G6 114 aa5.12□□□□□ -1.59
COPB1-211ENST00000534234 A0A0U1RQV1 116 aa5.12□□□□□ -1.59
COPB1-211ENST00000534234 ETDCA0A1B0GVM5 59 aa5.12□□□□□ -1.59
COPB1-211ENST00000534234 SERF1AO75920 110 aa5.12□□□□□ -1.59
COPB1-211ENST00000534234 TPRXLQ17RH7 258 aa5.12□□□□□ -1.59
COPB1-211ENST00000534234 KRTAP4-16G5E9R7 235 aaPredicted RBP5.11□□□□□ -1.59
COPB1-211ENST00000534234 LEPROTO15243 131 aa5.11□□□□□ -1.59
COPB1-211ENST00000534234 FABP4P15090 132 aa5.11□□□□□ -1.59
COPB1-211ENST00000534234 LINC00310P59036 64 aa5.11□□□□□ -1.59
COPB1-211ENST00000534234 TSPEAR-AS2P59090 65 aa5.11□□□□□ -1.59
COPB1-211ENST00000534234 S100A12P80511 92 aa5.11□□□□□ -1.59
COPB1-211ENST00000534234 DAND5Q8N907 189 aa5.11□□□□□ -1.59
COPB1-211ENST00000534234 PPDPFQ9H3Y8 114 aa5.11□□□□□ -1.59
COPB1-211ENST00000534234 LOC107984156A0A0G2JMH3 177 aa5.1□□□□□ -1.59
COPB1-211ENST00000534234 J3QQQ9 107 aa5.1□□□□□ -1.59
COPB1-211ENST00000534234 PLNP26678 52 aa5.1□□□□□ -1.59
COPB1-211ENST00000534234 ARL17AQ8IVW1 177 aa5.1□□□□□ -1.59
COPB1-211ENST00000534234 HSPB8Q9UJY1 196 aa5.1□□□□□ -1.59
COPB1-211ENST00000534234 DPM2O94777 84 aa5.09□□□□□ -1.59
COPB1-211ENST00000534234 TRBV10-2A0A0K0K1G8 114 aa5.08□□□□□ -1.6
COPB1-211ENST00000534234 B5MCH6 92 aa5.08□□□□□ -1.6
COPB1-211ENST00000534234 DDTP30046 118 aa5.08□□□□□ -1.6
COPB1-211ENST00000534234 HERVK_113P61574 105 aa5.08□□□□□ -1.6
COPB1-211ENST00000534234 GAGE2AQ6NT46 116 aa5.08□□□□□ -1.6
COPB1-211ENST00000534234 Q8NBF4 154 aa5.08□□□□□ -1.6
COPB1-211ENST00000534234 PMCHL2Q9BQD1 86 aa5.08□□□□□ -1.6
COPB1-211ENST00000534234 IGKCP01834 107 aa5.08□□□□□ -1.6
COPB1-211ENST00000534234 LGALS3P17931 250 aaKnown RBP5.08□□□□□ -1.6
COPB1-211ENST00000534234 NMUP48645 174 aa5.08□□□□□ -1.6
COPB1-211ENST00000534234 MIEN1Q9BRT3 115 aa5.08□□□□□ -1.6
COPB1-211ENST00000534234 ERC2-IT1O76042 136 aa5.07□□□□□ -1.6
COPB1-211ENST00000534234 LINC00483Q53H64 154 aa5.07□□□□□ -1.6
COPB1-211ENST00000534234 COLCA2A8K830 154 aa5.06□□□□□ -1.6
COPB1-211ENST00000534234 SPINK1P00995 79 aa5.06□□□□□ -1.6
COPB1-211ENST00000534234 S100A7L2Q5SY68 101 aa5.06□□□□□ -1.6
COPB1-211ENST00000534234 FP248Q71RG6 208 aaPredicted RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms