RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 SPANXA2-OT1Q8N9U9 137 aa1.79□□□□□ -2.12
ATPAF1-211ENST00000534216 COX14Q96I36 57 aa1.79□□□□□ -2.12
ATPAF1-211ENST00000534216 LINC00208Q96KT6 92 aa1.79□□□□□ -2.12
ATPAF1-211ENST00000534216 CNFNQ9BYD5 112 aa1.79□□□□□ -2.12
ATPAF1-211ENST00000534216 MRPL36Q9P0J6 103 aaKnown RBP1.79□□□□□ -2.12
ATPAF1-211ENST00000534216 PDE4DIPQ5VU43 2346 aa1.79□□□□□ -2.12
ATPAF1-211ENST00000534216 BPTFQ12830 3046 aa1.78□□□□□ -2.12
ATPAF1-211ENST00000534216 PTPRQQ9UMZ3 2332 aa1.78□□□□□ -2.12
ATPAF1-211ENST00000534216 SORL1Q92673 2214 aa1.78□□□□□ -2.12
ATPAF1-211ENST00000534216 IGLV10-54A0A075B6I4 117 aa1.78□□□□□ -2.12
ATPAF1-211ENST00000534216 JMJD7-PLA2G4BH0Y9G9 81 aa1.78□□□□□ -2.12
ATPAF1-211ENST00000534216 NCR3O14931 201 aa1.78□□□□□ -2.12
ATPAF1-211ENST00000534216 PPP1R17O96001 155 aa1.78□□□□□ -2.12
ATPAF1-211ENST00000534216 IGHV3-53P01767 116 aa1.78□□□□□ -2.12
ATPAF1-211ENST00000534216 RPS27P42677 84 aaKnown RBP1.78□□□□□ -2.12
ATPAF1-211ENST00000534216 DEFB123Q8N688 67 aa1.78□□□□□ -2.12
ATPAF1-211ENST00000534216 DEFB119Q8N690 84 aa1.78□□□□□ -2.12
ATPAF1-211ENST00000534216 COX7B2Q8TF08 81 aa1.78□□□□□ -2.12
ATPAF1-211ENST00000534216 SRCAPQ6ZRS2 3230 aa1.78□□□□□ -2.12
ATPAF1-211ENST00000534216 USF3Q68DE3 2245 aa1.78□□□□□ -2.13
ATPAF1-211ENST00000534216 MED13LQ71F56 2210 aa1.77□□□□□ -2.13
ATPAF1-211ENST00000534216 LOC110117498A0A087WWA1 95 aa1.77□□□□□ -2.13
ATPAF1-211ENST00000534216 IGHV1-3A0A0C4DH29 117 aa1.77□□□□□ -2.13
ATPAF1-211ENST00000534216 IGHV1-18A0A0C4DH31 117 aa1.77□□□□□ -2.13
ATPAF1-211ENST00000534216 SPTY2D1-AS1A0A0U1RR47 76 aa1.77□□□□□ -2.13
ATPAF1-211ENST00000534216 LINC00959A0A1B0GUT2 108 aa1.77□□□□□ -2.13
ATPAF1-211ENST00000534216 H0YGG7 62 aa1.77□□□□□ -2.13
ATPAF1-211ENST00000534216 NDUFB1O75438 58 aa1.77□□□□□ -2.13
ATPAF1-211ENST00000534216 STATHP02808 62 aa1.77□□□□□ -2.13
ATPAF1-211ENST00000534216 DEFB133Q30KQ1 61 aa1.77□□□□□ -2.13
ATPAF1-211ENST00000534216 DEFB134Q4QY38 66 aa1.77□□□□□ -2.13
ATPAF1-211ENST00000534216 C1orf137Q5JT78 98 aa1.77□□□□□ -2.13
ATPAF1-211ENST00000534216 KLK9Q9UKQ9 250 aa1.77□□□□□ -2.13
ATPAF1-211ENST00000534216 KMT2BQ9UMN6 2715 aaPredicted RBP1.77□□□□□ -2.13
ATPAF1-211ENST00000534216 IGKV3-7A0A075B6H7 116 aa1.76□□□□□ -2.13
ATPAF1-211ENST00000534216 IGKV2-29A2NJV5 120 aaPredicted RBP1.76□□□□□ -2.13
ATPAF1-211ENST00000534216 H0YGX0 51 aa1.76□□□□□ -2.13
ATPAF1-211ENST00000534216 H3BPC8 53 aa1.76□□□□□ -2.13
ATPAF1-211ENST00000534216 IGLV3-1P01715 115 aa1.76□□□□□ -2.13
ATPAF1-211ENST00000534216 CRIP1P50238 77 aa1.76□□□□□ -2.13
ATPAF1-211ENST00000534216 DEFB110Q30KQ9 67 aa1.76□□□□□ -2.13
ATPAF1-211ENST00000534216 SPATA8Q6RVD6 105 aa1.76□□□□□ -2.13
ATPAF1-211ENST00000534216 C9orf163Q8N9P6 203 aa1.76□□□□□ -2.13
ATPAF1-211ENST00000534216 SPRR4Q96PI1 79 aa1.76□□□□□ -2.13
ATPAF1-211ENST00000534216 SMIM2Q9BVW6 85 aa1.76□□□□□ -2.13
ATPAF1-211ENST00000534216 NUPR2A6NF83 97 aa1.75□□□□□ -2.13
ATPAF1-211ENST00000534216 NDUFA4O00483 81 aa1.75□□□□□ -2.13
ATPAF1-211ENST00000534216 CCL18P55774 89 aa1.75□□□□□ -2.13
ATPAF1-211ENST00000534216 DEFB114Q30KQ6 69 aa1.75□□□□□ -2.13
ATPAF1-211ENST00000534216 Q6ZTI0 123 aa1.75□□□□□ -2.13
ATPAF1-211ENST00000534216 ST20-AS1Q8NBB2 130 aa1.75□□□□□ -2.13
ATPAF1-211ENST00000534216 PATE1Q8WXA2 126 aa1.75□□□□□ -2.13
ATPAF1-211ENST00000534216 WFDC10AQ9H1F0 79 aa1.75□□□□□ -2.13
ATPAF1-211ENST00000534216 MINOS1-NBL1R4GNA1 71 aa1.75□□□□□ -2.13
ATPAF1-211ENST00000534216 URB1O60287 2271 aaKnown RBP1.74□□□□□ -2.13
ATPAF1-211ENST00000534216 IGKV3OR2-268A0A0C4DH90 116 aa1.74□□□□□ -2.13
ATPAF1-211ENST00000534216 H0Y9P7 68 aa1.74□□□□□ -2.13
ATPAF1-211ENST00000534216 HAMPP81172 84 aa1.74□□□□□ -2.13
ATPAF1-211ENST00000534216 C10orf113Q5VZT2 155 aa1.74□□□□□ -2.13
ATPAF1-211ENST00000534216 LINC00308Q8TCZ7 52 aa1.74□□□□□ -2.13
ATPAF1-211ENST00000534216 DMAC1Q96GE9 116 aa1.74□□□□□ -2.13
ATPAF1-211ENST00000534216 RTTNQ86VV8 2226 aa1.74□□□□□ -2.13
ATPAF1-211ENST00000534216 IGKV2-24A0A0C4DH68 120 aa1.73□□□□□ -2.13
ATPAF1-211ENST00000534216 M0R2N4 97 aa1.73□□□□□ -2.13
ATPAF1-211ENST00000534216 CCL3L1P16619 93 aa1.73□□□□□ -2.13
ATPAF1-211ENST00000534216 ERHP84090 104 aaKnown RBP1.73□□□□□ -2.13
ATPAF1-211ENST00000534216 KRTAP6-3Q3LI67 103 aa1.73□□□□□ -2.13
ATPAF1-211ENST00000534216 COA5Q86WW8 74 aa1.73□□□□□ -2.13
ATPAF1-211ENST00000534216 GAFA1Q96PS6 74 aa1.73□□□□□ -2.13
ATPAF1-211ENST00000534216 KCNQ1DNQ9H478 68 aa1.73□□□□□ -2.13
ATPAF1-211ENST00000534216 DOPEY2Q9Y3R5 2298 aa1.73□□□□□ -2.13
ATPAF1-211ENST00000534216 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.72□□□□□ -2.13
ATPAF1-211ENST00000534216 A0A087WTM6 91 aa1.72□□□□□ -2.13
ATPAF1-211ENST00000534216 ETDCA0A1B0GVM5 59 aa1.72□□□□□ -2.13
ATPAF1-211ENST00000534216 H3BQ85 93 aa1.72□□□□□ -2.13
ATPAF1-211ENST00000534216 NDUFA1O15239 70 aa1.72□□□□□ -2.13
ATPAF1-211ENST00000534216 RNASE3P12724 160 aaKnown RBP1.72□□□□□ -2.13
ATPAF1-211ENST00000534216 PDE6HQ13956 83 aa1.72□□□□□ -2.13
ATPAF1-211ENST00000534216 KRTAP21-2Q3LI59 83 aa1.72□□□□□ -2.13
ATPAF1-211ENST00000534216 PIGYQ3MUY2 71 aa1.72□□□□□ -2.13
ATPAF1-211ENST00000534216 SPINK9Q5DT21 86 aa1.72□□□□□ -2.13
ATPAF1-211ENST00000534216 PRO3102Q9H379 93 aa1.72□□□□□ -2.13
ATPAF1-211ENST00000534216 TECTAO75443 2155 aa1.72□□□□□ -2.13
ATPAF1-211ENST00000534216 TRGV2A0A075B6R0 118 aa1.71□□□□□ -2.14
ATPAF1-211ENST00000534216 TRGV4A0A0C4DH28 118 aa1.71□□□□□ -2.14
ATPAF1-211ENST00000534216 TRBV6-4A0A1B0GX49 114 aa1.71□□□□□ -2.14
ATPAF1-211ENST00000534216 IGLV7-43P04211 117 aa1.71□□□□□ -2.14
ATPAF1-211ENST00000534216 PRB1P04280 392 aa1.71□□□□□ -2.14
ATPAF1-211ENST00000534216 DEFB112Q30KQ8 113 aa1.71□□□□□ -2.14
ATPAF1-211ENST00000534216 SPINT4Q6UDR6 99 aa1.71□□□□□ -2.14
ATPAF1-211ENST00000534216 SMIM11BQ8TCY0 68 aa1.71□□□□□ -2.14
ATPAF1-211ENST00000534216 LINC00472Q9H8W2 130 aa1.71□□□□□ -2.14
ATPAF1-211ENST00000534216 CUL9Q8IWT3 2517 aa1.71□□□□□ -2.14
ATPAF1-211ENST00000534216 IGHV3-64A0A075B6Q5 118 aa1.7□□□□□ -2.14
ATPAF1-211ENST00000534216 UQCR11O14957 56 aa1.7□□□□□ -2.14
ATPAF1-211ENST00000534216 MGPP08493 103 aa1.7□□□□□ -2.14
ATPAF1-211ENST00000534216 AHCTF1Q8WYP5 2266 aa1.7□□□□□ -2.14
ATPAF1-211ENST00000534216 ASCC3Q8N3C0 2202 aaKnown RBP1.7□□□□□ -2.14
ATPAF1-211ENST00000534216 A0A1B0GU33 70 aa1.69□□□□□ -2.14
ATPAF1-211ENST00000534216 MRPL33O75394 65 aaKnown RBP1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms