RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 OBSCN-AS1Q96MR7 158 aa2.21□□□□□ -2.06
CSMD3-210ENST00000534172 LIMD2Q9BT23 127 aa2.21□□□□□ -2.06
CSMD3-210ENST00000534172 LINC00846Q9NV44 126 aa2.21□□□□□ -2.06
CSMD3-210ENST00000534172 UBR4Q5T4S7 5183 aa2.21□□□□□ -2.06
CSMD3-210ENST00000534172 SHANK1Q9Y566 2161 aa2.21□□□□□ -2.06
CSMD3-210ENST00000534172 COL27A1Q8IZC6 1860 aaPredicted RBP2.21□□□□□ -2.06
CSMD3-210ENST00000534172 MPDZO75970 2070 aa2.21□□□□□ -2.06
CSMD3-210ENST00000534172 TENM1Q9UKZ4 2725 aa2.21□□□□□ -2.06
CSMD3-210ENST00000534172 NSD1Q96L73 2696 aaPredicted RBP2.2□□□□□ -2.06
CSMD3-210ENST00000534172 A8MWP4 228 aa2.2□□□□□ -2.06
CSMD3-210ENST00000534172 HCG22E2RYF7 251 aa2.2□□□□□ -2.06
CSMD3-210ENST00000534172 C19orf84I3L1E1 186 aa2.2□□□□□ -2.06
CSMD3-210ENST00000534172 LEPROTO15243 131 aa2.2□□□□□ -2.06
CSMD3-210ENST00000534172 PPP1R17O96001 155 aa2.2□□□□□ -2.06
CSMD3-210ENST00000534172 Q6ZS52 159 aa2.2□□□□□ -2.06
CSMD3-210ENST00000534172 SPTSSBQ8NFR3 76 aa2.2□□□□□ -2.06
CSMD3-210ENST00000534172 TMEM254Q8TBM7 123 aa2.2□□□□□ -2.06
CSMD3-210ENST00000534172 AMELXQ99217 191 aa2.2□□□□□ -2.06
CSMD3-210ENST00000534172 TGP01266 2768 aa2.2□□□□□ -2.06
CSMD3-210ENST00000534172 TLN2Q9Y4G6 2542 aa2.2□□□□□ -2.06
CSMD3-210ENST00000534172 CRYBG3Q68DQ2 2970 aa2.2□□□□□ -2.06
CSMD3-210ENST00000534172 C3orf84H3BNL1 204 aa2.2□□□□□ -2.06
CSMD3-210ENST00000534172 M0R1W7 72 aa2.2□□□□□ -2.06
CSMD3-210ENST00000534172 LINC00574Q9H8X3 128 aa2.2□□□□□ -2.06
CSMD3-210ENST00000534172 CDC42SE1Q9NRR8 79 aa2.2□□□□□ -2.06
CSMD3-210ENST00000534172 TMEM14CQ9P0S9 112 aa2.2□□□□□ -2.06
CSMD3-210ENST00000534172 RYR1P21817 5038 aa2.2□□□□□ -2.06
CSMD3-210ENST00000534172 PRRC2AP48634 2157 aaKnown RBP2.2□□□□□ -2.06
CSMD3-210ENST00000534172 KIAA1109Q2LD37 5005 aa2.19□□□□□ -2.06
CSMD3-210ENST00000534172 IGLV4-69A0A075B6H9 119 aa2.19□□□□□ -2.06
CSMD3-210ENST00000534172 TSPEAR-AS2P59090 65 aa2.19□□□□□ -2.06
CSMD3-210ENST00000534172 PIGYQ3MUY2 71 aa2.19□□□□□ -2.06
CSMD3-210ENST00000534172 Q5VV11 94 aa2.19□□□□□ -2.06
CSMD3-210ENST00000534172 ZFAND2AQ8N6M9 145 aa2.19□□□□□ -2.06
CSMD3-210ENST00000534172 KLF14Q8TD94 323 aaPredicted RBP2.19□□□□□ -2.06
CSMD3-210ENST00000534172 LINC00167Q96N53 147 aa2.19□□□□□ -2.06
CSMD3-210ENST00000534172 CNFNQ9BYD5 112 aa2.19□□□□□ -2.06
CSMD3-210ENST00000534172 UBL5Q9BZL1 73 aa2.19□□□□□ -2.06
CSMD3-210ENST00000534172 TMEM14BQ9NUH8 114 aa2.19□□□□□ -2.06
CSMD3-210ENST00000534172 PRRC2CQ9Y520 2896 aaKnown RBP2.19□□□□□ -2.06
CSMD3-210ENST00000534172 CHKB-CPT1BH3BT56 60 aa2.19□□□□□ -2.06
CSMD3-210ENST00000534172 IGHV1-46P01743 117 aa2.19□□□□□ -2.06
CSMD3-210ENST00000534172 C10orf113Q5VZT2 155 aa2.19□□□□□ -2.06
CSMD3-210ENST00000534172 Q5W150 140 aa2.19□□□□□ -2.06
CSMD3-210ENST00000534172 LYZL1Q6UWQ5 148 aa2.19□□□□□ -2.06
CSMD3-210ENST00000534172 ZNF833PQ6ZTB9 187 aa2.19□□□□□ -2.06
CSMD3-210ENST00000534172 Q8N9L7 120 aa2.19□□□□□ -2.06
CSMD3-210ENST00000534172 NACAE9PAV3 2078 aa2.19□□□□□ -2.06
CSMD3-210ENST00000534172 HEATR5BQ9P2D3 2071 aa2.19□□□□□ -2.06
CSMD3-210ENST00000534172 MGAQ8IWI9 3026 aa2.19□□□□□ -2.06
CSMD3-210ENST00000534172 SPTBP11277 2137 aa2.19□□□□□ -2.06
CSMD3-210ENST00000534172 A0A1W2PNU3 283 aaPredicted RBP2.18□□□□□ -2.06
CSMD3-210ENST00000534172 MIAQ16674 131 aa2.18□□□□□ -2.06
CSMD3-210ENST00000534172 ENHOQ6UWT2 76 aa2.18□□□□□ -2.06
CSMD3-210ENST00000534172 KRTAP5-2Q701N4 177 aa2.18□□□□□ -2.06
CSMD3-210ENST00000534172 MIR7-3HGQ8N6C7 128 aa2.18□□□□□ -2.06
CSMD3-210ENST00000534172 ACANP16112 2415 aa2.18□□□□□ -2.06
CSMD3-210ENST00000534172 CACNA1CQ13936 2221 aa2.18□□□□□ -2.06
CSMD3-210ENST00000534172 IGLV3-12A0A075B6K2 115 aa2.18□□□□□ -2.06
CSMD3-210ENST00000534172 TRBV6-8A0A0A6YYG3 113 aa2.18□□□□□ -2.06
CSMD3-210ENST00000534172 A0A1B0GW54 56 aa2.18□□□□□ -2.06
CSMD3-210ENST00000534172 C9orf116Q5BN46 136 aaPredicted RBP2.18□□□□□ -2.06
CSMD3-210ENST00000534172 KRTAP11-1Q8IUC1 163 aa2.18□□□□□ -2.06
CSMD3-210ENST00000534172 SMIM2Q9BVW6 85 aa2.18□□□□□ -2.06
CSMD3-210ENST00000534172 C22orf24Q9Y442 160 aa2.18□□□□□ -2.06
CSMD3-210ENST00000534172 IGLV3-9A0A075B6K5 115 aa2.17□□□□□ -2.06
CSMD3-210ENST00000534172 JMJD7-PLA2G4BH0Y9G9 81 aa2.17□□□□□ -2.06
CSMD3-210ENST00000534172 PSCAO43653 123 aa2.17□□□□□ -2.06
CSMD3-210ENST00000534172 NREPQ16612 68 aa2.17□□□□□ -2.06
CSMD3-210ENST00000534172 MXRA5Q9NR99 2828 aa2.17□□□□□ -2.06
CSMD3-210ENST00000534172 TRAV12-3A0A0B4J271 114 aa2.17□□□□□ -2.06
CSMD3-210ENST00000534172 LECT2O14960 151 aa2.17□□□□□ -2.06
CSMD3-210ENST00000534172 LHBP01229 141 aa2.17□□□□□ -2.06
CSMD3-210ENST00000534172 CCL3P10147 92 aa2.17□□□□□ -2.06
CSMD3-210ENST00000534172 PDE6HQ13956 83 aa2.17□□□□□ -2.06
CSMD3-210ENST00000534172 CASC2Q6XLA1 102 aa2.17□□□□□ -2.06
CSMD3-210ENST00000534172 C14orf132Q9NPU4 83 aa2.17□□□□□ -2.06
CSMD3-210ENST00000534172 CXorf51AA0A1B0GTR3 108 aa2.16□□□□□ -2.06
CSMD3-210ENST00000534172 C17orf98A8MV24 154 aa2.16□□□□□ -2.06
CSMD3-210ENST00000534172 RPL27AP46776 148 aaKnown RBP2.16□□□□□ -2.06
CSMD3-210ENST00000534172 SPINK9Q5DT21 86 aa2.16□□□□□ -2.06
CSMD3-210ENST00000534172 LYPD1Q8N2G4 141 aa2.16□□□□□ -2.06
CSMD3-210ENST00000534172 C1orf64Q8NEQ6 169 aa2.16□□□□□ -2.06
CSMD3-210ENST00000534172 RNF5Q99942 180 aa2.16□□□□□ -2.06
CSMD3-210ENST00000534172 SDK2Q58EX2 2172 aa2.16□□□□□ -2.06
CSMD3-210ENST00000534172 IGHV3-30-3P0DP02 117 aa2.16□□□□□ -2.06
CSMD3-210ENST00000534172 RETNLBQ9BQ08 111 aa2.16□□□□□ -2.06
CSMD3-210ENST00000534172 CDC42SE2Q9NRR3 84 aa2.16□□□□□ -2.06
CSMD3-210ENST00000534172 MRPL36Q9P0J6 103 aaKnown RBP2.16□□□□□ -2.06
CSMD3-210ENST00000534172 VWFP04275 2813 aa2.16□□□□□ -2.06
CSMD3-210ENST00000534172 MGAM2Q2M2H8 2515 aa2.16□□□□□ -2.06
CSMD3-210ENST00000534172 DYNC2H1Q8NCM8 4307 aaKnown RBP2.15□□□□□ -2.06
CSMD3-210ENST00000534172 ESPL1Q14674 2120 aa2.15□□□□□ -2.06
CSMD3-210ENST00000534172 LOC101927531A0A1B0GV80 90 aa2.15□□□□□ -2.06
CSMD3-210ENST00000534172 C10orf142B7Z368 130 aa2.15□□□□□ -2.06
CSMD3-210ENST00000534172 IGLV3-19P01714 112 aa2.15□□□□□ -2.06
CSMD3-210ENST00000534172 LCE3EQ5T5B0 92 aa2.15□□□□□ -2.06
CSMD3-210ENST00000534172 MYO7BQ6PIF6 2116 aa2.15□□□□□ -2.07
CSMD3-210ENST00000534172 ZANQ9Y493 2812 aa2.15□□□□□ -2.07
CSMD3-210ENST00000534172 IGKV1OR2-108A0A075B7D4 117 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms