RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 SPAG11AQ6PDA7 123 aa10.23□□□□□ -0.77
UBXN1-216ENST00000533908 C11orf86A6NJI1 115 aa10.22□□□□□ -0.77
UBXN1-216ENST00000533908 KRTAP13-3Q3SY46 172 aa10.21□□□□□ -0.77
UBXN1-216ENST00000533908 DAND5Q8N907 189 aa10.21□□□□□ -0.77
UBXN1-216ENST00000533908 KRTAP4-1Q9BYQ7 146 aa10.21□□□□□ -0.77
UBXN1-216ENST00000533908 S100PP25815 95 aa10.2□□□□□ -0.78
UBXN1-216ENST00000533908 PMCHL1Q16048 86 aa10.2□□□□□ -0.78
UBXN1-216ENST00000533908 A0A0U1RRA0 63 aa10.18□□□□□ -0.78
UBXN1-216ENST00000533908 LINC00614P0C842 121 aa10.18□□□□□ -0.78
UBXN1-216ENST00000533908 LINC00158P58513 81 aa10.18□□□□□ -0.78
UBXN1-216ENST00000533908 COX19Q49B96 90 aa10.18□□□□□ -0.78
UBXN1-216ENST00000533908 TMEM170BQ5T4T1 132 aa10.18□□□□□ -0.78
UBXN1-216ENST00000533908 UQCC3Q6UW78 93 aa10.18□□□□□ -0.78
UBXN1-216ENST00000533908 FP248Q71RG6 208 aaPredicted RBP10.18□□□□□ -0.78
UBXN1-216ENST00000533908 BAGE3Q86Y29 109 aa10.18□□□□□ -0.78
UBXN1-216ENST00000533908 C18orf32Q8TCD1 76 aa10.18□□□□□ -0.78
UBXN1-216ENST00000533908 Q8NBF4 154 aa10.17□□□□□ -0.78
UBXN1-216ENST00000533908 SEC11CQ9BY50 192 aa10.17□□□□□ -0.78
UBXN1-216ENST00000533908 HBDP02042 147 aa10.16□□□□□ -0.78
UBXN1-216ENST00000533908 ASB16-AS1Q495Z4 193 aa10.16□□□□□ -0.78
UBXN1-216ENST00000533908 C4orf48Q5BLP8 95 aa10.15□□□□□ -0.78
UBXN1-216ENST00000533908 LINC00337Q8N6G1 96 aa10.15□□□□□ -0.78
UBXN1-216ENST00000533908 SMCR5Q8TEV8 140 aa10.15□□□□□ -0.78
UBXN1-216ENST00000533908 KRTAP4-16G5E9R7 235 aaPredicted RBP10.14□□□□□ -0.79
UBXN1-216ENST00000533908 SPRR1AP35321 89 aa10.14□□□□□ -0.79
UBXN1-216ENST00000533908 SFTA2Q6UW10 78 aa10.14□□□□□ -0.79
UBXN1-216ENST00000533908 IFITM2Q01629 132 aa10.13□□□□□ -0.79
UBXN1-216ENST00000533908 ZNF706Q9Y5V0 76 aaPredicted RBP10.13□□□□□ -0.79
UBXN1-216ENST00000533908 TMEM223A0PJW6 202 aa10.12□□□□□ -0.79
UBXN1-216ENST00000533908 SMIM13P0DJ93 91 aa10.12□□□□□ -0.79
UBXN1-216ENST00000533908 PRYO14603 147 aa10.11□□□□□ -0.79
UBXN1-216ENST00000533908 KCNQ1DNQ9H478 68 aa10.11□□□□□ -0.79
UBXN1-216ENST00000533908 CHTOPQ9Y3Y2 248 aaKnown RBP10.11□□□□□ -0.79
UBXN1-216ENST00000533908 TRAPPC1Q9Y5R8 145 aa10.11□□□□□ -0.79
UBXN1-216ENST00000533908 NCR3O14931 201 aa10.1□□□□□ -0.79
UBXN1-216ENST00000533908 C10orf91Q5T1B1 145 aa10.1□□□□□ -0.79
UBXN1-216ENST00000533908 BOD1L2Q8IYS8 172 aa10.1□□□□□ -0.79
UBXN1-216ENST00000533908 RPS10P5Q9NQ39 176 aa10.1□□□□□ -0.79
UBXN1-216ENST00000533908 SPINK1P00995 79 aa10.09□□□□□ -0.79
UBXN1-216ENST00000533908 LINC00483Q53H64 154 aa10.09□□□□□ -0.79
UBXN1-216ENST00000533908 TRBV10-3A0A0K0K1G6 114 aa10.07□□□□□ -0.8
UBXN1-216ENST00000533908 ERC2-IT1O76042 136 aa10.07□□□□□ -0.8
UBXN1-216ENST00000533908 LINC01547P58512 204 aaPredicted RBP10.07□□□□□ -0.8
UBXN1-216ENST00000533908 MIR7-3HGQ8N6C7 128 aa10.07□□□□□ -0.8
UBXN1-216ENST00000533908 LCE2DQ5TA82 110 aaPredicted RBP10.06□□□□□ -0.8
UBXN1-216ENST00000533908 GAGE2AQ6NT46 116 aa10.06□□□□□ -0.8
UBXN1-216ENST00000533908 ETDCA0A1B0GVM5 59 aa10.05□□□□□ -0.8
UBXN1-216ENST00000533908 RHEBQ15382 184 aa10.05□□□□□ -0.8
UBXN1-216ENST00000533908 Q8N377 158 aa10.05□□□□□ -0.8
UBXN1-216ENST00000533908 B5MCH6 92 aa10.04□□□□□ -0.8
UBXN1-216ENST00000533908 ATP6V1G1O75348 118 aa10.04□□□□□ -0.8
UBXN1-216ENST00000533908 SEC61BP60468 96 aaKnown RBP10.04□□□□□ -0.8
UBXN1-216ENST00000533908 MEIG1Q5JSS6 88 aa10.04□□□□□ -0.8
UBXN1-216ENST00000533908 COMMD7Q86VX2 200 aa10.04□□□□□ -0.8
UBXN1-216ENST00000533908 TRAV12-1A0A0B4J245 112 aa10.03□□□□□ -0.8
UBXN1-216ENST00000533908 MOBPQ13875 183 aa10.03□□□□□ -0.8
UBXN1-216ENST00000533908 IGLV9-49A0A0B4J1Y8 123 aa10.02□□□□□ -0.81
UBXN1-216ENST00000533908 IFI27L1Q96BM0 104 aa10.02□□□□□ -0.81
UBXN1-216ENST00000533908 LCE2CQ5TA81 110 aa10.01□□□□□ -0.81
UBXN1-216ENST00000533908 Q9BRP9 147 aa10.01□□□□□ -0.81
UBXN1-216ENST00000533908 HERV-K104P63124 156 aa10□□□□□ -0.81
UBXN1-216ENST00000533908 SSBP3-AS1Q7Z2R9 100 aa10□□□□□ -0.81
UBXN1-216ENST00000533908 NDUFA12Q9UI09 145 aa10□□□□□ -0.81
UBXN1-216ENST00000533908 RPS29P62273 56 aaKnown RBP9.99□□□□□ -0.81
UBXN1-216ENST00000533908 XP32Q5T750 250 aa9.98□□□□□ -0.81
UBXN1-216ENST00000533908 LOC107984156A0A0G2JMH3 177 aa9.97□□□□□ -0.81
UBXN1-216ENST00000533908 TSPEAR-AS2P59090 65 aa9.97□□□□□ -0.81
UBXN1-216ENST00000533908 ARL17AQ8IVW1 177 aa9.97□□□□□ -0.81
UBXN1-216ENST00000533908 FSIP2Q5CZC0 6907 aa9.96□□□□□ -0.81
UBXN1-216ENST00000533908 SLC25A20O43772 301 aa9.96□□□□□ -0.82
UBXN1-216ENST00000533908 CHCHD1Q96BP2 118 aaKnown RBP9.96□□□□□ -0.82
UBXN1-216ENST00000533908 MYMXA0A1B0GTQ4 84 aa9.95□□□□□ -0.82
UBXN1-216ENST00000533908 DDTP30046 118 aa9.95□□□□□ -0.82
UBXN1-216ENST00000533908 KRTAP19-2Q3LHN2 52 aa9.95□□□□□ -0.82
UBXN1-216ENST00000533908 Q6ZRX8 168 aa9.95□□□□□ -0.82
UBXN1-216ENST00000533908 LINC00587B1AMM8 73 aa9.94□□□□□ -0.82
UBXN1-216ENST00000533908 FAM19A2Q8N3H0 131 aa9.94□□□□□ -0.82
UBXN1-216ENST00000533908 CRCT1Q9UGL9 99 aa9.94□□□□□ -0.82
UBXN1-216ENST00000533908 TRBV10-2A0A0K0K1G8 114 aa9.93□□□□□ -0.82
UBXN1-216ENST00000533908 YPEL4Q96NS1 127 aa9.93□□□□□ -0.82
UBXN1-216ENST00000533908 MAP1LC3CQ9BXW4 147 aa9.93□□□□□ -0.82
UBXN1-216ENST00000533908 S100A12P80511 92 aa9.91□□□□□ -0.82
UBXN1-216ENST00000533908 LEPROTO15243 131 aa9.9□□□□□ -0.82
UBXN1-216ENST00000533908 APOC3P02656 99 aa9.9□□□□□ -0.82
UBXN1-216ENST00000533908 EIF4EBP3O60516 100 aaPredicted RBP9.89□□□□□ -0.83
UBXN1-216ENST00000533908 IGLV6-57P01721 117 aa9.89□□□□□ -0.83
UBXN1-216ENST00000533908 ST20-AS1Q8NBB2 130 aa9.89□□□□□ -0.83
UBXN1-216ENST00000533908 H0Y8G0 127 aa9.88□□□□□ -0.83
UBXN1-216ENST00000533908 C9orf153Q5TBE3 101 aa9.87□□□□□ -0.83
UBXN1-216ENST00000533908 SPANXB1Q9NS25 103 aaPredicted RBP9.87□□□□□ -0.83
UBXN1-216ENST00000533908 J3QQQ9 107 aa9.86□□□□□ -0.83
UBXN1-216ENST00000533908 HSBP1O75506 76 aa9.86□□□□□ -0.83
UBXN1-216ENST00000533908 SOSTDC1Q6X4U4 206 aa9.86□□□□□ -0.83
UBXN1-216ENST00000533908 NDUFC2O95298 119 aa9.85□□□□□ -0.83
UBXN1-216ENST00000533908 MT1HP80294 61 aa9.85□□□□□ -0.83
UBXN1-216ENST00000533908 S100A7L2Q5SY68 101 aa9.85□□□□□ -0.83
UBXN1-216ENST00000533908 SNAPINO95295 136 aa9.84□□□□□ -0.83
UBXN1-216ENST00000533908 LINC00310P59036 64 aa9.84□□□□□ -0.83
UBXN1-216ENST00000533908 TRAV23DV6A0A075B6W5 121 aa9.83□□□□□ -0.84
UBXN1-216ENST00000533908 PCOTHQ58A44 107 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 153.9 ms