RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 KIAA0087Q14695 138 aa7.62□□□□□ -1.19
CAPRIN1-213ENST00000533562 GAGE2EQ4V326 116 aa7.62□□□□□ -1.19
CAPRIN1-213ENST00000533562 LINC01561Q8N1V8 128 aa7.62□□□□□ -1.19
CAPRIN1-213ENST00000533562 SIGMAR1Q99720 223 aa7.62□□□□□ -1.19
CAPRIN1-213ENST00000533562 C6orf48Q9UBA6 75 aa7.62□□□□□ -1.19
CAPRIN1-213ENST00000533562 GAGE2DQ9UEU5 116 aa7.62□□□□□ -1.19
CAPRIN1-213ENST00000533562 TRBV30A0A0K0K1B3 111 aa7.61□□□□□ -1.19
CAPRIN1-213ENST00000533562 K7EP34 96 aa7.61□□□□□ -1.19
CAPRIN1-213ENST00000533562 UBE2D1P51668 147 aa7.61□□□□□ -1.19
CAPRIN1-213ENST00000533562 C2orf66Q6UXQ4 117 aa7.61□□□□□ -1.19
CAPRIN1-213ENST00000533562 HSPB8Q9UJY1 196 aa7.61□□□□□ -1.19
CAPRIN1-213ENST00000533562 FAM168BA1KXE4 195 aa7.6□□□□□ -1.19
CAPRIN1-213ENST00000533562 C9orf118A6NHY6 69 aa7.6□□□□□ -1.19
CAPRIN1-213ENST00000533562 PRSS2P07478 247 aa7.6□□□□□ -1.19
CAPRIN1-213ENST00000533562 PAPPA-AS1Q5QFB9 102 aa7.6□□□□□ -1.19
CAPRIN1-213ENST00000533562 C18orf32Q8TCD1 76 aa7.6□□□□□ -1.19
CAPRIN1-213ENST00000533562 NXT2Q9NPJ8 142 aaKnown RBP7.6□□□□□ -1.19
CAPRIN1-213ENST00000533562 NDUFC2-KCTD14E9PQ53 114 aa7.59□□□□□ -1.19
CAPRIN1-213ENST00000533562 IGLV7-43P04211 117 aa7.59□□□□□ -1.19
CAPRIN1-213ENST00000533562 C2orf82Q6UX34 121 aa7.59□□□□□ -1.19
CAPRIN1-213ENST00000533562 FAM19A5Q7Z5A7 132 aaPredicted RBP7.59□□□□□ -1.19
CAPRIN1-213ENST00000533562 DIRC1Q969H9 104 aa7.59□□□□□ -1.19
CAPRIN1-213ENST00000533562 AMELXQ99217 191 aa7.59□□□□□ -1.19
CAPRIN1-213ENST00000533562 MAP1LC3CQ9BXW4 147 aa7.59□□□□□ -1.19
CAPRIN1-213ENST00000533562 IGIPA6NJ69 53 aa7.58□□□□□ -1.2
CAPRIN1-213ENST00000533562 CKS1BP61024 79 aa7.58□□□□□ -1.2
CAPRIN1-213ENST00000533562 C6orf226Q5I0X4 101 aa7.58□□□□□ -1.2
CAPRIN1-213ENST00000533562 COX8AP10176 69 aa7.57□□□□□ -1.2
CAPRIN1-213ENST00000533562 HSD52Q0P140 79 aa7.57□□□□□ -1.2
CAPRIN1-213ENST00000533562 ZC2HC1BQ5TFG8 222 aa7.57□□□□□ -1.2
CAPRIN1-213ENST00000533562 LINC00173Q6ZV60 143 aa7.57□□□□□ -1.2
CAPRIN1-213ENST00000533562 SYS1-DBNDD2H3BUS1 97 aa7.56□□□□□ -1.2
CAPRIN1-213ENST00000533562 M0QXV9 152 aa7.56□□□□□ -1.2
CAPRIN1-213ENST00000533562 LEPROTL1O95214 131 aa7.56□□□□□ -1.2
CAPRIN1-213ENST00000533562 FABP2P12104 132 aa7.56□□□□□ -1.2
CAPRIN1-213ENST00000533562 HERVK_113P63121 156 aa7.56□□□□□ -1.2
CAPRIN1-213ENST00000533562 UBE2BP63146 152 aa7.56□□□□□ -1.2
CAPRIN1-213ENST00000533562 FAM19A3Q7Z5A8 133 aa7.56□□□□□ -1.2
CAPRIN1-213ENST00000533562 TOMM7Q9P0U1 55 aa7.56□□□□□ -1.2
CAPRIN1-213ENST00000533562 Q8IZM0 81 aa7.55□□□□□ -1.2
CAPRIN1-213ENST00000533562 TIMM17AQ99595 171 aa7.55□□□□□ -1.2
CAPRIN1-213ENST00000533562 GEMIN7Q9H840 131 aaKnown RBP7.55□□□□□ -1.2
CAPRIN1-213ENST00000533562 RNF213Q63HN8 5207 aa7.55□□□□□ -1.2
CAPRIN1-213ENST00000533562 H0Y8G0 127 aa7.54□□□□□ -1.2
CAPRIN1-213ENST00000533562 H0Y9J4 135 aa7.54□□□□□ -1.2
CAPRIN1-213ENST00000533562 C9orf129Q5T035 196 aaKnown RBP7.54□□□□□ -1.2
CAPRIN1-213ENST00000533562 ERASQ7Z444 233 aa7.54□□□□□ -1.2
CAPRIN1-213ENST00000533562 KRTAP11-1Q8IUC1 163 aa7.54□□□□□ -1.2
CAPRIN1-213ENST00000533562 KRTAP7-1Q8IUC3 87 aa7.54□□□□□ -1.2
CAPRIN1-213ENST00000533562 TOMM6Q96B49 74 aa7.54□□□□□ -1.2
CAPRIN1-213ENST00000533562 F8W1H4 67 aa7.53□□□□□ -1.2
CAPRIN1-213ENST00000533562 KIAA1644Q3SXP7 199 aa7.53□□□□□ -1.2
CAPRIN1-213ENST00000533562 CDKN2A-AS1Q9UH64 79 aa7.53□□□□□ -1.2
CAPRIN1-213ENST00000533562 LINC01549A6NIU2 74 aa7.52□□□□□ -1.21
CAPRIN1-213ENST00000533562 LINC01545Q5VT33 79 aa7.52□□□□□ -1.21
CAPRIN1-213ENST00000533562 PRR26Q8N8Z3 221 aa7.52□□□□□ -1.21
CAPRIN1-213ENST00000533562 SCGB3A1Q96QR1 104 aa7.52□□□□□ -1.21
CAPRIN1-213ENST00000533562 A0A1W2PPM0 123 aa7.51□□□□□ -1.21
CAPRIN1-213ENST00000533562 F8VRH5 84 aa7.51□□□□□ -1.21
CAPRIN1-213ENST00000533562 CXCL5P42830 114 aa7.51□□□□□ -1.21
CAPRIN1-213ENST00000533562 FAM19A2Q8N3H0 131 aa7.51□□□□□ -1.21
CAPRIN1-213ENST00000533562 SPCS1Q9Y6A9 102 aa7.51□□□□□ -1.21
CAPRIN1-213ENST00000533562 IGLV1-50A0A075B6I6 118 aa7.5□□□□□ -1.21
CAPRIN1-213ENST00000533562 ATOH7Q8N100 152 aa7.5□□□□□ -1.21
CAPRIN1-213ENST00000533562 C22orf24Q9Y442 160 aa7.5□□□□□ -1.21
CAPRIN1-213ENST00000533562 TINCRA0A1B0GVN0 87 aa7.49□□□□□ -1.21
CAPRIN1-213ENST00000533562 SMIM13P0DJ93 91 aa7.49□□□□□ -1.21
CAPRIN1-213ENST00000533562 RPL24P83731 157 aaKnown RBP7.49□□□□□ -1.21
CAPRIN1-213ENST00000533562 Q6ZVH6 145 aa7.49□□□□□ -1.21
CAPRIN1-213ENST00000533562 BOD1L2Q8IYS8 172 aa7.49□□□□□ -1.21
CAPRIN1-213ENST00000533562 XAGE1AQ9HD64 81 aa7.49□□□□□ -1.21
CAPRIN1-213ENST00000533562 HIGD1BQ9P298 99 aa7.49□□□□□ -1.21
CAPRIN1-213ENST00000533562 LORP23490 312 aaPredicted RBP7.48□□□□□ -1.21
CAPRIN1-213ENST00000533562 LINC01546A6NGU7 62 aa7.47□□□□□ -1.21
CAPRIN1-213ENST00000533562 H3BUT2 72 aa7.47□□□□□ -1.21
CAPRIN1-213ENST00000533562 ZNF861PO60384 105 aa7.47□□□□□ -1.21
CAPRIN1-213ENST00000533562 RPL13AP40429 203 aaKnown RBP7.47□□□□□ -1.21
CAPRIN1-213ENST00000533562 TAL2Q16559 108 aa7.47□□□□□ -1.21
CAPRIN1-213ENST00000533562 COX7B2Q8TF08 81 aa7.47□□□□□ -1.21
CAPRIN1-213ENST00000533562 TP73-AS1Q9UF72 201 aa7.47□□□□□ -1.21
CAPRIN1-213ENST00000533562 SMIM1B2RUZ4 78 aa7.46□□□□□ -1.22
CAPRIN1-213ENST00000533562 KRTAP1-4P0C5Y4 121 aa7.46□□□□□ -1.22
CAPRIN1-213ENST00000533562 C2orf91Q6ZV80 131 aa7.46□□□□□ -1.22
CAPRIN1-213ENST00000533562 MRPL55Q7Z7F7 128 aaKnown RBP7.46□□□□□ -1.22
CAPRIN1-213ENST00000533562 IGLV5-45A0A087WSX0 123 aa7.45□□□□□ -1.22
CAPRIN1-213ENST00000533562 PMVKQ15126 192 aa7.45□□□□□ -1.22
CAPRIN1-213ENST00000533562 LYRM7Q5U5X0 104 aa7.45□□□□□ -1.22
CAPRIN1-213ENST00000533562 TSPAN13O95857 204 aa7.43□□□□□ -1.22
CAPRIN1-213ENST00000533562 RPL28P46779 137 aaKnown RBP7.43□□□□□ -1.22
CAPRIN1-213ENST00000533562 BCE1O60756 84 aa7.42□□□□□ -1.22
CAPRIN1-213ENST00000533562 ATP5LO75964 103 aa7.42□□□□□ -1.22
CAPRIN1-213ENST00000533562 SPINK8P0C7L1 97 aa7.42□□□□□ -1.22
CAPRIN1-213ENST00000533562 LINC00167Q96N53 147 aa7.42□□□□□ -1.22
CAPRIN1-213ENST00000533562 SPANXDQ9BXN6 97 aa7.42□□□□□ -1.22
CAPRIN1-213ENST00000533562 LPAP08519 4548 aa7.41□□□□□ -1.22
CAPRIN1-213ENST00000533562 RPL37AP8A6NKH3 93 aa7.4□□□□□ -1.22
CAPRIN1-213ENST00000533562 NKAPP1Q8N9T2 125 aa7.4□□□□□ -1.22
CAPRIN1-213ENST00000533562 SPANXB1Q9NS25 103 aaPredicted RBP7.4□□□□□ -1.22
CAPRIN1-213ENST00000533562 SPANXCQ9NY87 97 aa7.4□□□□□ -1.22
CAPRIN1-213ENST00000533562 URB1-AS1Q96HZ7 61 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms