RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 Q6ZQY7 126 aa8.7□□□□□ -1.02
BDNF-218ENST00000533246 COL27A1Q8IZC6 1860 aaPredicted RBP8.7□□□□□ -1.02
BDNF-218ENST00000533246 VPREB1P12018 145 aa8.7□□□□□ -1.02
BDNF-218ENST00000533246 NBEAL2Q6ZNJ1 2754 aa8.69□□□□□ -1.02
BDNF-218ENST00000533246 A6NED7 52 aa8.69□□□□□ -1.02
BDNF-218ENST00000533246 ESRGQ1W209 222 aa8.69□□□□□ -1.02
BDNF-218ENST00000533246 AMELXQ99217 191 aa8.69□□□□□ -1.02
BDNF-218ENST00000533246 NANOS2P60321 138 aaKnown RBP8.69□□□□□ -1.02
BDNF-218ENST00000533246 GCN1Q92616 2671 aaKnown RBP8.68□□□□□ -1.02
BDNF-218ENST00000533246 CYSRT1A8MQ03 144 aa8.68□□□□□ -1.02
BDNF-218ENST00000533246 COL6A5A8TX70 2615 aa8.67□□□□□ -1.02
BDNF-218ENST00000533246 H3BS24 57 aa8.67□□□□□ -1.02
BDNF-218ENST00000533246 PLAC8L1A1L4L8 177 aa8.67□□□□□ -1.02
BDNF-218ENST00000533246 CYSTM1Q9H1C7 97 aa8.67□□□□□ -1.02
BDNF-218ENST00000533246 ASH1LQ9NR48 2969 aaKnown RBP8.67□□□□□ -1.02
BDNF-218ENST00000533246 ITPR1Q14643 2758 aa8.67□□□□□ -1.02
BDNF-218ENST00000533246 OXTP01178 125 aa8.66□□□□□ -1.02
BDNF-218ENST00000533246 SYCNQ0VAF6 134 aa8.66□□□□□ -1.02
BDNF-218ENST00000533246 BEAN1Q3B7T3 259 aa8.65□□□□□ -1.02
BDNF-218ENST00000533246 C11orf72Q8NBR9 251 aa8.65□□□□□ -1.03
BDNF-218ENST00000533246 A8MTW9 85 aa8.64□□□□□ -1.03
BDNF-218ENST00000533246 NDUFS5O43920 106 aa8.64□□□□□ -1.03
BDNF-218ENST00000533246 UBE2AP49459 152 aa8.64□□□□□ -1.03
BDNF-218ENST00000533246 NTM-AS1Q6ZSK4 140 aa8.64□□□□□ -1.03
BDNF-218ENST00000533246 LELP1Q5T871 98 aa8.64□□□□□ -1.03
BDNF-218ENST00000533246 LRBAP50851 2863 aa8.64□□□□□ -1.03
BDNF-218ENST00000533246 A0A0J9YWU9 116 aa8.64□□□□□ -1.03
BDNF-218ENST00000533246 RPL37AP8A6NKH3 93 aa8.64□□□□□ -1.03
BDNF-218ENST00000533246 SERTAD4-AS1Q5TG53 156 aa8.64□□□□□ -1.03
BDNF-218ENST00000533246 C6orf223Q8N319 242 aa8.64□□□□□ -1.03
BDNF-218ENST00000533246 RPL28P46779 137 aaKnown RBP8.64□□□□□ -1.03
BDNF-218ENST00000533246 C3orf84H3BNL1 204 aa8.63□□□□□ -1.03
BDNF-218ENST00000533246 Q6ZTC4 211 aa8.63□□□□□ -1.03
BDNF-218ENST00000533246 IGSF10Q6WRI0 2623 aa8.63□□□□□ -1.03
BDNF-218ENST00000533246 DMXL1Q9Y485 3027 aa8.61□□□□□ -1.03
BDNF-218ENST00000533246 UNC79Q9P2D8 2635 aa8.61□□□□□ -1.03
BDNF-218ENST00000533246 M0R2N4 97 aa8.61□□□□□ -1.03
BDNF-218ENST00000533246 A0A087WYN8 130 aa8.6□□□□□ -1.03
BDNF-218ENST00000533246 Q8IZM0 81 aa8.6□□□□□ -1.03
BDNF-218ENST00000533246 BPY2O14599 106 aa8.6□□□□□ -1.03
BDNF-218ENST00000533246 Q8N2B8 174 aa8.6□□□□□ -1.03
BDNF-218ENST00000533246 USP34Q70CQ2 3546 aa8.59□□□□□ -1.03
BDNF-218ENST00000533246 FAM19A3Q7Z5A8 133 aa8.59□□□□□ -1.03
BDNF-218ENST00000533246 Q8N3U1 123 aa8.59□□□□□ -1.03
BDNF-218ENST00000533246 TMEM254Q8TBM7 123 aa8.59□□□□□ -1.03
BDNF-218ENST00000533246 LINC00337Q8N6G1 96 aa8.58□□□□□ -1.04
BDNF-218ENST00000533246 MDFIQ99750 246 aa8.58□□□□□ -1.04
BDNF-218ENST00000533246 WFDC10BQ8IUB3 73 aa8.57□□□□□ -1.04
BDNF-218ENST00000533246 TRBV10-3A0A0K0K1G6 114 aa8.57□□□□□ -1.04
BDNF-218ENST00000533246 H7BZZ5 65 aa8.56□□□□□ -1.04
BDNF-218ENST00000533246 PRYO14603 147 aa8.56□□□□□ -1.04
BDNF-218ENST00000533246 ZNF73O43830 326 aaPredicted RBP8.55□□□□□ -1.04
BDNF-218ENST00000533246 CELA1Q9UNI1 258 aa8.55□□□□□ -1.04
BDNF-218ENST00000533246 H0Y9J4 135 aa8.55□□□□□ -1.04
BDNF-218ENST00000533246 PRR15LQ9BU68 103 aa8.55□□□□□ -1.04
BDNF-218ENST00000533246 TRAV10A0A0B4J240 114 aa8.54□□□□□ -1.04
BDNF-218ENST00000533246 IGHV3OR16-9A0A0B4J2B5 98 aa8.54□□□□□ -1.04
BDNF-218ENST00000533246 LINC01546A6NGU7 62 aa8.54□□□□□ -1.04
BDNF-218ENST00000533246 PDE6GP18545 87 aa8.54□□□□□ -1.04
BDNF-218ENST00000533246 RBM12B-AS1Q9P1G2 102 aa8.54□□□□□ -1.04
BDNF-218ENST00000533246 WDFY3Q8IZQ1 3526 aa8.53□□□□□ -1.04
BDNF-218ENST00000533246 C16orf95Q9H693 158 aa8.53□□□□□ -1.04
BDNF-218ENST00000533246 FP248Q71RG6 208 aaPredicted RBP8.52□□□□□ -1.04
BDNF-218ENST00000533246 NSD1Q96L73 2696 aaPredicted RBP8.51□□□□□ -1.05
BDNF-218ENST00000533246 M0R378 163 aa8.51□□□□□ -1.05
BDNF-218ENST00000533246 Q8N814 137 aa8.5□□□□□ -1.05
BDNF-218ENST00000533246 IGLV5-39A0A0G2JS06 123 aa8.5□□□□□ -1.05
BDNF-218ENST00000533246 EIF4EBP3O60516 100 aaPredicted RBP8.5□□□□□ -1.05
BDNF-218ENST00000533246 NDUFB1O75438 58 aa8.5□□□□□ -1.05
BDNF-218ENST00000533246 LYPD5Q6UWN5 251 aa8.49□□□□□ -1.05
BDNF-218ENST00000533246 MP68P56378 58 aa8.49□□□□□ -1.05
BDNF-218ENST00000533246 KTN1-AS1Q86SY8 53 aa8.49□□□□□ -1.05
BDNF-218ENST00000533246 A0A1B0GUV1 79 aa8.48□□□□□ -1.05
BDNF-218ENST00000533246 COX17Q14061 63 aa8.48□□□□□ -1.05
BDNF-218ENST00000533246 BAHCC1Q9P281 2608 aa8.48□□□□□ -1.05
BDNF-218ENST00000533246 H3BQ85 93 aa8.48□□□□□ -1.05
BDNF-218ENST00000533246 A8MUN3 132 aa8.47□□□□□ -1.05
BDNF-218ENST00000533246 FAM218AQ96MZ4 157 aa8.47□□□□□ -1.05
BDNF-218ENST00000533246 ZANQ9Y493 2812 aa8.47□□□□□ -1.05
BDNF-218ENST00000533246 TM2D3Q9BRN9 247 aa8.46□□□□□ -1.05
BDNF-218ENST00000533246 C10orf25Q5T742 122 aa8.46□□□□□ -1.05
BDNF-218ENST00000533246 WFDC13Q8IUB5 93 aa8.46□□□□□ -1.05
BDNF-218ENST00000533246 Q6ZRU5 148 aa8.46□□□□□ -1.06
BDNF-218ENST00000533246 PRR15Q8IV56 129 aa8.46□□□□□ -1.06
BDNF-218ENST00000533246 FAM30AQ9NZY2 134 aa8.46□□□□□ -1.06
BDNF-218ENST00000533246 EGFEM1PQ0D2K5 195 aa8.45□□□□□ -1.06
BDNF-218ENST00000533246 UTP20O75691 2785 aaKnown RBP8.45□□□□□ -1.06
BDNF-218ENST00000533246 FSHBP01225 129 aa8.45□□□□□ -1.06
BDNF-218ENST00000533246 X6R8D5 127 aa8.45□□□□□ -1.06
BDNF-218ENST00000533246 MUC3AQ02505 3323 aa8.45□□□□□ -1.06
BDNF-218ENST00000533246 KLK9Q2XQG4 91 aa8.45□□□□□ -1.06
BDNF-218ENST00000533246 HCG22E2RYF7 251 aa8.44□□□□□ -1.06
BDNF-218ENST00000533246 ITPR2Q14571 2701 aa8.44□□□□□ -1.06
BDNF-218ENST00000533246 LINC01547P58512 204 aaPredicted RBP8.44□□□□□ -1.06
BDNF-218ENST00000533246 KLKP1Q107X0 134 aa8.44□□□□□ -1.06
BDNF-218ENST00000533246 B9D2Q9BPU9 175 aa8.44□□□□□ -1.06
BDNF-218ENST00000533246 SPINK6Q6UWN8 80 aa8.43□□□□□ -1.06
BDNF-218ENST00000533246 DCHS1Q96JQ0 3298 aa8.42□□□□□ -1.06
BDNF-218ENST00000533246 TNRC18O15417 2968 aaPredicted RBP8.42□□□□□ -1.06
BDNF-218ENST00000533246 CELSR2Q9HCU4 2923 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms