RNA–Protein interactions for RNA: ENST00000532661.5

LTBP3-220, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-220ENST00000532661 IGLV5-37A0A075B6J1 123 aa13.69□□□□□ -0.22
LTBP3-220ENST00000532661 PFN2P35080 140 aa13.69□□□□□ -0.22
LTBP3-220ENST00000532661 RPL13AP40429 203 aaKnown RBP13.69□□□□□ -0.22
LTBP3-220ENST00000532661 HIST1H2BLQ99880 126 aa13.69□□□□□ -0.22
LTBP3-220ENST00000532661 LEPROTL1O95214 131 aa13.68□□□□□ -0.22
LTBP3-220ENST00000532661 FABP4P15090 132 aa13.67□□□□□ -0.22
LTBP3-220ENST00000532661 RPL28P46779 137 aaKnown RBP13.67□□□□□ -0.22
LTBP3-220ENST00000532661 HSPB8Q9UJY1 196 aa13.67□□□□□ -0.22
LTBP3-220ENST00000532661 NKAPP1Q8N9T2 125 aa13.66□□□□□ -0.22
LTBP3-220ENST00000532661 C11orf86A6NJI1 115 aa13.65□□□□□ -0.22
LTBP3-220ENST00000532661 ZNF625Q96I27 306 aaPredicted RBP13.64□□□□□ -0.23
LTBP3-220ENST00000532661 A0A087X002 238 aa13.63□□□□□ -0.23
LTBP3-220ENST00000532661 ERG28Q9UKR5 140 aa13.63□□□□□ -0.23
LTBP3-220ENST00000532661 IFI27L1Q96BM0 104 aa13.62□□□□□ -0.23
LTBP3-220ENST00000532661 SND1-IT1Q9HBX3 110 aa13.62□□□□□ -0.23
LTBP3-220ENST00000532661 IGKV2-28A0A075B6P5 120 aa13.61□□□□□ -0.23
LTBP3-220ENST00000532661 IGKV2D-28P01615 120 aa13.61□□□□□ -0.23
LTBP3-220ENST00000532661 TMEM170BQ5T4T1 132 aa13.61□□□□□ -0.23
LTBP3-220ENST00000532661 KRTAP13-1Q8IUC0 172 aa13.61□□□□□ -0.23
LTBP3-220ENST00000532661 ANAPC11Q9NYG5 84 aa13.61□□□□□ -0.23
LTBP3-220ENST00000532661 VPREB1P12018 145 aa13.6□□□□□ -0.23
LTBP3-220ENST00000532661 UBE2AP49459 152 aa13.59□□□□□ -0.23
LTBP3-220ENST00000532661 Q8NDZ9 215 aa13.59□□□□□ -0.23
LTBP3-220ENST00000532661 MAP1LC3CQ9BXW4 147 aa13.59□□□□□ -0.23
LTBP3-220ENST00000532661 PRR4Q16378 134 aa13.58□□□□□ -0.24
LTBP3-220ENST00000532661 CHTOPQ9Y3Y2 248 aaKnown RBP13.58□□□□□ -0.24
LTBP3-220ENST00000532661 LOC105371267A0A1B0GV96 52 aa13.57□□□□□ -0.24
LTBP3-220ENST00000532661 TSPAN13O95857 204 aa13.57□□□□□ -0.24
LTBP3-220ENST00000532661 C3orf79P0CE67 100 aa13.56□□□□□ -0.24
LTBP3-220ENST00000532661 CRYGAP11844 174 aa13.56□□□□□ -0.24
LTBP3-220ENST00000532661 KRTDAPP60985 99 aa13.56□□□□□ -0.24
LTBP3-220ENST00000532661 COX17Q14061 63 aa13.56□□□□□ -0.24
LTBP3-220ENST00000532661 TMEM238C9JI98 176 aa13.54□□□□□ -0.24
LTBP3-220ENST00000532661 SYS1-DBNDD2H3BUS1 97 aa13.54□□□□□ -0.24
LTBP3-220ENST00000532661 TYMSOSQ8TAI1 123 aa13.54□□□□□ -0.24
LTBP3-220ENST00000532661 TRAV12-1A0A0B4J245 112 aa13.53□□□□□ -0.24
LTBP3-220ENST00000532661 PRLHP81277 87 aa13.53□□□□□ -0.24
LTBP3-220ENST00000532661 PET117Q6UWS5 81 aa13.53□□□□□ -0.24
LTBP3-220ENST00000532661 RPL24P83731 157 aaKnown RBP13.52□□□□□ -0.25
LTBP3-220ENST00000532661 KRTAP13-2Q52LG2 175 aa13.52□□□□□ -0.25
LTBP3-220ENST00000532661 TMEM126AQ9H061 195 aa13.52□□□□□ -0.25
LTBP3-220ENST00000532661 TMEM223A0PJW6 202 aa13.51□□□□□ -0.25
LTBP3-220ENST00000532661 AKR1D1P51857 326 aa13.51□□□□□ -0.25
LTBP3-220ENST00000532661 A0A0U1RRA0 63 aa13.5□□□□□ -0.25
LTBP3-220ENST00000532661 H0Y8G0 127 aa13.5□□□□□ -0.25
LTBP3-220ENST00000532661 LINC00158P58513 81 aa13.5□□□□□ -0.25
LTBP3-220ENST00000532661 SFTA2Q6UW10 78 aa13.5□□□□□ -0.25
LTBP3-220ENST00000532661 FAM19A1Q7Z5A9 133 aa13.5□□□□□ -0.25
LTBP3-220ENST00000532661 C20orf202A1L168 122 aa13.49□□□□□ -0.25
LTBP3-220ENST00000532661 M0R378 163 aa13.49□□□□□ -0.25
LTBP3-220ENST00000532661 LINC01545Q5VT33 79 aa13.48□□□□□ -0.25
LTBP3-220ENST00000532661 JOSD1Q15040 202 aaPredicted RBP13.46□□□□□ -0.25
LTBP3-220ENST00000532661 FAM229BQ4G0N7 80 aa13.45□□□□□ -0.26
LTBP3-220ENST00000532661 SCGB1D1O95968 90 aa13.44□□□□□ -0.26
LTBP3-220ENST00000532661 SMIM13P0DJ93 91 aa13.43□□□□□ -0.26
LTBP3-220ENST00000532661 PLNP26678 52 aa13.42□□□□□ -0.26
LTBP3-220ENST00000532661 PYY3Q5JQD4 70 aa13.42□□□□□ -0.26
LTBP3-220ENST00000532661 DPM2O94777 84 aa13.41□□□□□ -0.26
LTBP3-220ENST00000532661 PLEKHB2Q96CS7 222 aa13.41□□□□□ -0.26
LTBP3-220ENST00000532661 PMCHL2Q9BQD1 86 aa13.41□□□□□ -0.26
LTBP3-220ENST00000532661 IGKCP01834 107 aa13.4□□□□□ -0.26
LTBP3-220ENST00000532661 IGKV2D-26A0A0A0MRZ7 120 aa13.39□□□□□ -0.27
LTBP3-220ENST00000532661 MEIG1Q5JSS6 88 aa13.39□□□□□ -0.27
LTBP3-220ENST00000532661 HIGD2AQ9BW72 106 aa13.39□□□□□ -0.27
LTBP3-220ENST00000532661 MIR7-3HGQ8N6C7 128 aa13.38□□□□□ -0.27
LTBP3-220ENST00000532661 LINC00304Q8N9R0 145 aa13.38□□□□□ -0.27
LTBP3-220ENST00000532661 SMIM6P0DI80 62 aa13.37□□□□□ -0.27
LTBP3-220ENST00000532661 BOD1L2Q8IYS8 172 aa13.37□□□□□ -0.27
LTBP3-220ENST00000532661 RETNLBQ9BQ08 111 aa13.37□□□□□ -0.27
LTBP3-220ENST00000532661 MUC2Q02817 5179 aa13.36□□□□□ -0.27
LTBP3-220ENST00000532661 NDUFA12Q9UI09 145 aa13.36□□□□□ -0.27
LTBP3-220ENST00000532661 NCR3O14931 201 aa13.35□□□□□ -0.27
LTBP3-220ENST00000532661 HERV-K104P63124 156 aa13.35□□□□□ -0.27
LTBP3-220ENST00000532661 TSPEAR-AS2P59090 65 aa13.34□□□□□ -0.27
LTBP3-220ENST00000532661 ATOH7Q8N100 152 aa13.34□□□□□ -0.27
LTBP3-220ENST00000532661 C3orf22Q8N5N4 141 aa13.34□□□□□ -0.27
LTBP3-220ENST00000532661 MYMXA0A1B0GTQ4 84 aa13.31□□□□□ -0.28
LTBP3-220ENST00000532661 PRYO14603 147 aa13.3□□□□□ -0.28
LTBP3-220ENST00000532661 SPRR4Q96PI1 79 aa13.3□□□□□ -0.28
LTBP3-220ENST00000532661 LEPROTO15243 131 aa13.29□□□□□ -0.28
LTBP3-220ENST00000532661 LINC00587B1AMM8 73 aa13.28□□□□□ -0.28
LTBP3-220ENST00000532661 HSBP1L1C9JCN9 74 aa13.28□□□□□ -0.28
LTBP3-220ENST00000532661 DAND5Q8N907 189 aa13.28□□□□□ -0.28
LTBP3-220ENST00000532661 KCNQ1DNQ9H478 68 aa13.28□□□□□ -0.28
LTBP3-220ENST00000532661 TRBV10-3A0A0K0K1G6 114 aa13.27□□□□□ -0.29
LTBP3-220ENST00000532661 SPRR1AP35321 89 aa13.27□□□□□ -0.29
LTBP3-220ENST00000532661 HERVK_113P61574 105 aa13.27□□□□□ -0.29
LTBP3-220ENST00000532661 VAMP8Q9BV40 100 aa13.27□□□□□ -0.29
LTBP3-220ENST00000532661 LINC00337Q8N6G1 96 aa13.26□□□□□ -0.29
LTBP3-220ENST00000532661 KRTAP4-16G5E9R7 235 aaPredicted RBP13.25□□□□□ -0.29
LTBP3-220ENST00000532661 S100A12P80511 92 aa13.25□□□□□ -0.29
LTBP3-220ENST00000532661 SMCR5Q8TEV8 140 aa13.25□□□□□ -0.29
LTBP3-220ENST00000532661 J3QQQ9 107 aa13.24□□□□□ -0.29
LTBP3-220ENST00000532661 C12orf57Q99622 126 aa13.24□□□□□ -0.29
LTBP3-220ENST00000532661 ETDCA0A1B0GVM5 59 aa13.23□□□□□ -0.29
LTBP3-220ENST00000532661 E9PLD3 99 aa13.23□□□□□ -0.29
LTBP3-220ENST00000532661 LINC00518Q8N0U6 118 aa13.23□□□□□ -0.29
LTBP3-220ENST00000532661 ANKRD39Q53RE8 183 aa13.22□□□□□ -0.29
LTBP3-220ENST00000532661 PPDPFQ9H3Y8 114 aa13.22□□□□□ -0.29
LTBP3-220ENST00000532661 PAM16Q9Y3D7 125 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms