RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 LINC00337Q8N6G1 96 aa7.78□□□□□ -1.16
PTPRK-221ENST00000532331 LIMD2Q9BT23 127 aa7.78□□□□□ -1.16
PTPRK-221ENST00000532331 KRTAP1-1Q07627 177 aa7.77□□□□□ -1.17
PTPRK-221ENST00000532331 LINC00208Q96KT6 92 aa7.77□□□□□ -1.17
PTPRK-221ENST00000532331 C19orf73Q9NVV2 129 aa7.77□□□□□ -1.17
PTPRK-221ENST00000532331 PLA2G1BP04054 148 aaKnown RBP7.77□□□□□ -1.17
PTPRK-221ENST00000532331 CCDC179H3BU77 68 aa7.77□□□□□ -1.17
PTPRK-221ENST00000532331 PRLHP81277 87 aa7.77□□□□□ -1.17
PTPRK-221ENST00000532331 J3QL48 77 aa7.76□□□□□ -1.17
PTPRK-221ENST00000532331 LINC01547P58512 204 aaPredicted RBP7.76□□□□□ -1.17
PTPRK-221ENST00000532331 KLK9Q2XQG4 91 aa7.76□□□□□ -1.17
PTPRK-221ENST00000532331 A8MTW9 85 aa7.76□□□□□ -1.17
PTPRK-221ENST00000532331 SMCR5Q8TEV8 140 aa7.75□□□□□ -1.17
PTPRK-221ENST00000532331 A0A087WVE0 104 aa7.75□□□□□ -1.17
PTPRK-221ENST00000532331 Q8N3U1 123 aa7.74□□□□□ -1.17
PTPRK-221ENST00000532331 A6NED7 52 aa7.74□□□□□ -1.17
PTPRK-221ENST00000532331 Q6ZRP5 223 aa7.72□□□□□ -1.17
PTPRK-221ENST00000532331 DNAH12Q6ZR08 3092 aa7.72□□□□□ -1.17
PTPRK-221ENST00000532331 C6orf48Q9UBA6 75 aa7.71□□□□□ -1.17
PTPRK-221ENST00000532331 IGLV5-45A0A087WSX0 123 aa7.71□□□□□ -1.18
PTPRK-221ENST00000532331 DNAH10OSP0CZ25 163 aa7.71□□□□□ -1.18
PTPRK-221ENST00000532331 DEFB116Q30KQ4 102 aa7.71□□□□□ -1.18
PTPRK-221ENST00000532331 TM2D3Q9BRN9 247 aa7.71□□□□□ -1.18
PTPRK-221ENST00000532331 LINC00167Q96N53 147 aa7.7□□□□□ -1.18
PTPRK-221ENST00000532331 RETNLBQ9BQ08 111 aa7.7□□□□□ -1.18
PTPRK-221ENST00000532331 CEP350Q5VT06 3117 aa7.69□□□□□ -1.18
PTPRK-221ENST00000532331 LINC00846Q9NV44 126 aa7.69□□□□□ -1.18
PTPRK-221ENST00000532331 HELZ2Q9BYK8 2649 aaKnown RBP7.69□□□□□ -1.18
PTPRK-221ENST00000532331 TRBV7-6A0A0J9YX20 115 aa7.69□□□□□ -1.18
PTPRK-221ENST00000532331 KIAA0087Q14695 138 aa7.69□□□□□ -1.18
PTPRK-221ENST00000532331 HCG22E2RYF7 251 aa7.69□□□□□ -1.18
PTPRK-221ENST00000532331 CSNK1G2-AS1Q8NCQ2 148 aa7.68□□□□□ -1.18
PTPRK-221ENST00000532331 SMIM26A0A096LP01 95 aa7.68□□□□□ -1.18
PTPRK-221ENST00000532331 H0Y9P7 68 aa7.68□□□□□ -1.18
PTPRK-221ENST00000532331 RPL37AP61513 92 aaKnown RBP7.68□□□□□ -1.18
PTPRK-221ENST00000532331 A0A0U1RQV1 116 aa7.68□□□□□ -1.18
PTPRK-221ENST00000532331 PHF5AQ7RTV0 110 aaKnown RBP7.68□□□□□ -1.18
PTPRK-221ENST00000532331 PCOTHQ58A44 107 aa7.67□□□□□ -1.18
PTPRK-221ENST00000532331 CRYGAP11844 174 aa7.67□□□□□ -1.18
PTPRK-221ENST00000532331 Q9UF83 564 aa7.67□□□□□ -1.18
PTPRK-221ENST00000532331 LINC00336Q6ZUF6 198 aa7.66□□□□□ -1.18
PTPRK-221ENST00000532331 TRBV7-7A0A0K0K1E9 115 aa7.66□□□□□ -1.18
PTPRK-221ENST00000532331 CXCL6P80162 114 aa7.66□□□□□ -1.18
PTPRK-221ENST00000532331 SPACA4Q8TDM5 124 aa7.65□□□□□ -1.18
PTPRK-221ENST00000532331 TYMSOSQ8TAI1 123 aa7.65□□□□□ -1.19
PTPRK-221ENST00000532331 GVQW2A0A096LPI5 108 aaPredicted RBP7.64□□□□□ -1.19
PTPRK-221ENST00000532331 MOBPQ13875 183 aa7.64□□□□□ -1.19
PTPRK-221ENST00000532331 CHTF8P0CG12 524 aa7.63□□□□□ -1.19
PTPRK-221ENST00000532331 ELOF1P60002 83 aaKnown RBP7.63□□□□□ -1.19
PTPRK-221ENST00000532331 TMEM254Q8TBM7 123 aa7.62□□□□□ -1.19
PTPRK-221ENST00000532331 SOSTDC1Q6X4U4 206 aa7.62□□□□□ -1.19
PTPRK-221ENST00000532331 hDV103S1A0JD37 113 aa7.61□□□□□ -1.19
PTPRK-221ENST00000532331 SPINK1P00995 79 aa7.6□□□□□ -1.19
PTPRK-221ENST00000532331 A0A1B0GW54 56 aa7.6□□□□□ -1.19
PTPRK-221ENST00000532331 Q6ZRX8 168 aa7.6□□□□□ -1.19
PTPRK-221ENST00000532331 C1orf64Q8NEQ6 169 aa7.58□□□□□ -1.2
PTPRK-221ENST00000532331 MGAM2Q2M2H8 2515 aa7.58□□□□□ -1.2
PTPRK-221ENST00000532331 FAM218AQ96MZ4 157 aa7.58□□□□□ -1.2
PTPRK-221ENST00000532331 A0A087WTM6 91 aa7.58□□□□□ -1.2
PTPRK-221ENST00000532331 EPM2AB3EWF7 344 aa7.58□□□□□ -1.2
PTPRK-221ENST00000532331 APLNQ9ULZ1 77 aa7.58□□□□□ -1.2
PTPRK-221ENST00000532331 BCE1O60756 84 aa7.57□□□□□ -1.2
PTPRK-221ENST00000532331 IGKV2D-30A0A075B6S6 120 aa7.57□□□□□ -1.2
PTPRK-221ENST00000532331 IGKV2-30P06310 120 aa7.57□□□□□ -1.2
PTPRK-221ENST00000532331 MUC4Q99102 2169 aa7.57□□□□□ -1.2
PTPRK-221ENST00000532331 GIG44P09565 113 aaPredicted RBP7.57□□□□□ -1.2
PTPRK-221ENST00000532331 SMIM29Q86T20 159 aa7.57□□□□□ -1.2
PTPRK-221ENST00000532331 Q8NBF4 154 aa7.56□□□□□ -1.2
PTPRK-221ENST00000532331 TP53AIP1Q9HCN2 124 aa7.56□□□□□ -1.2
PTPRK-221ENST00000532331 CHD7Q9P2D1 2997 aa7.56□□□□□ -1.2
PTPRK-221ENST00000532331 CDIP1Q9H305 208 aa7.56□□□□□ -1.2
PTPRK-221ENST00000532331 LINC00476Q8WZB0 136 aa7.55□□□□□ -1.2
PTPRK-221ENST00000532331 SMR3BP02814 79 aaPredicted RBP7.54□□□□□ -1.2
PTPRK-221ENST00000532331 SMCPP49901 116 aaPredicted RBP7.54□□□□□ -1.2
PTPRK-221ENST00000532331 FLNAP21333 2647 aaKnown RBP7.53□□□□□ -1.2
PTPRK-221ENST00000532331 Q6ZQT0 140 aa7.53□□□□□ -1.2
PTPRK-221ENST00000532331 LOC110117498A0A087WWA1 95 aa7.53□□□□□ -1.2
PTPRK-221ENST00000532331 ITPR3Q14573 2671 aa7.52□□□□□ -1.2
PTPRK-221ENST00000532331 LINC00612Q8N6U2 182 aa7.52□□□□□ -1.21
PTPRK-221ENST00000532331 ST20-AS1Q8NBB2 130 aa7.52□□□□□ -1.21
PTPRK-221ENST00000532331 CFAP46Q8IYW2 2715 aa7.51□□□□□ -1.21
PTPRK-221ENST00000532331 C7orf65Q6ZTY9 151 aa7.51□□□□□ -1.21
PTPRK-221ENST00000532331 PRRC2CQ9Y520 2896 aaKnown RBP7.5□□□□□ -1.21
PTPRK-221ENST00000532331 PSPHP1O15172 72 aa7.5□□□□□ -1.21
PTPRK-221ENST00000532331 VPREB1P12018 145 aa7.5□□□□□ -1.21
PTPRK-221ENST00000532331 CASC10Q5T4H9 136 aa7.5□□□□□ -1.21
PTPRK-221ENST00000532331 PRO0461Q9UI25 63 aa7.5□□□□□ -1.21
PTPRK-221ENST00000532331 FAM168BA1KXE4 195 aa7.49□□□□□ -1.21
PTPRK-221ENST00000532331 C1orf195Q5TG92 126 aa7.49□□□□□ -1.21
PTPRK-221ENST00000532331 LITAFQ99732 161 aa7.49□□□□□ -1.21
PTPRK-221ENST00000532331 IGLV6-57P01721 117 aa7.49□□□□□ -1.21
PTPRK-221ENST00000532331 LINC00313P59037 77 aa7.48□□□□□ -1.21
PTPRK-221ENST00000532331 CHD9Q3L8U1 2897 aa7.48□□□□□ -1.21
PTPRK-221ENST00000532331 PRR34Q9NV39 138 aa7.48□□□□□ -1.21
PTPRK-221ENST00000532331 PMAIP1Q13794 54 aa7.48□□□□□ -1.21
PTPRK-221ENST00000532331 USP24Q9UPU5 2620 aa7.47□□□□□ -1.21
PTPRK-221ENST00000532331 C9orf163Q8N9P6 203 aa7.46□□□□□ -1.21
PTPRK-221ENST00000532331 ACYP2P14621 99 aa7.46□□□□□ -1.22
PTPRK-221ENST00000532331 ZNF575Q86XF7 245 aa7.46□□□□□ -1.22
PTPRK-221ENST00000532331 H3BPC8 53 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms