RNA–Protein interactions for RNA: ENST00000532279.1

PPP1CA-207, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-207ENST00000532279 UBE2AP49459 152 aa13.66□□□□□ -0.22
PPP1CA-207ENST00000532279 Q8NDZ9 215 aa13.65□□□□□ -0.22
PPP1CA-207ENST00000532279 COLCA2A8K830 154 aa13.64□□□□□ -0.23
PPP1CA-207ENST00000532279 MEIG1Q5JSS6 88 aa13.62□□□□□ -0.23
PPP1CA-207ENST00000532279 TMEM238C9JI98 176 aa13.61□□□□□ -0.23
PPP1CA-207ENST00000532279 SMIM13P0DJ93 91 aa13.61□□□□□ -0.23
PPP1CA-207ENST00000532279 FABP4P15090 132 aa13.61□□□□□ -0.23
PPP1CA-207ENST00000532279 KRTAP13-1Q8IUC0 172 aa13.61□□□□□ -0.23
PPP1CA-207ENST00000532279 ATP6V1G1O75348 118 aa13.6□□□□□ -0.23
PPP1CA-207ENST00000532279 PRLHP81277 87 aa13.6□□□□□ -0.23
PPP1CA-207ENST00000532279 FAM19A1Q7Z5A9 133 aa13.6□□□□□ -0.23
PPP1CA-207ENST00000532279 TMEM126AQ9H061 195 aa13.6□□□□□ -0.23
PPP1CA-207ENST00000532279 HSPB8Q9UJY1 196 aa13.6□□□□□ -0.23
PPP1CA-207ENST00000532279 NDUFA12Q9UI09 145 aa13.59□□□□□ -0.23
PPP1CA-207ENST00000532279 A0A087X002 238 aa13.58□□□□□ -0.24
PPP1CA-207ENST00000532279 LRP2P98164 4655 aa13.58□□□□□ -0.24
PPP1CA-207ENST00000532279 HERV-K104P63124 156 aa13.57□□□□□ -0.24
PPP1CA-207ENST00000532279 ANAPC11Q9NYG5 84 aa13.57□□□□□ -0.24
PPP1CA-207ENST00000532279 M0R378 163 aa13.56□□□□□ -0.24
PPP1CA-207ENST00000532279 CRYGAP11844 174 aa13.56□□□□□ -0.24
PPP1CA-207ENST00000532279 PLNP26678 52 aa13.56□□□□□ -0.24
PPP1CA-207ENST00000532279 MIR7-3HGQ8N6C7 128 aa13.56□□□□□ -0.24
PPP1CA-207ENST00000532279 PMCHL2Q9BQD1 86 aa13.56□□□□□ -0.24
PPP1CA-207ENST00000532279 MYMXA0A1B0GTQ4 84 aa13.55□□□□□ -0.24
PPP1CA-207ENST00000532279 TSPEAR-AS2P59090 65 aa13.55□□□□□ -0.24
PPP1CA-207ENST00000532279 BOD1L2Q8IYS8 172 aa13.54□□□□□ -0.24
PPP1CA-207ENST00000532279 LEPROTO15243 131 aa13.53□□□□□ -0.24
PPP1CA-207ENST00000532279 DPM2O94777 84 aa13.53□□□□□ -0.24
PPP1CA-207ENST00000532279 LINC00587B1AMM8 73 aa13.52□□□□□ -0.25
PPP1CA-207ENST00000532279 NCR3O14931 201 aa13.52□□□□□ -0.25
PPP1CA-207ENST00000532279 TYMSOSQ8TAI1 123 aa13.52□□□□□ -0.25
PPP1CA-207ENST00000532279 PLEKHB2Q96CS7 222 aa13.52□□□□□ -0.25
PPP1CA-207ENST00000532279 IGKCP01834 107 aa13.51□□□□□ -0.25
PPP1CA-207ENST00000532279 MAP1LC3CQ9BXW4 147 aa13.51□□□□□ -0.25
PPP1CA-207ENST00000532279 HERVK_113P61574 105 aa13.5□□□□□ -0.25
PPP1CA-207ENST00000532279 J3QQQ9 107 aa13.49□□□□□ -0.25
PPP1CA-207ENST00000532279 TSPAN13O95857 204 aa13.49□□□□□ -0.25
PPP1CA-207ENST00000532279 DAND5Q8N907 189 aa13.48□□□□□ -0.25
PPP1CA-207ENST00000532279 KRTAP13-2Q52LG2 175 aa13.47□□□□□ -0.25
PPP1CA-207ENST00000532279 HIST1H2BKO60814 126 aa13.46□□□□□ -0.25
PPP1CA-207ENST00000532279 HIST1H2BJP06899 126 aa13.46□□□□□ -0.25
PPP1CA-207ENST00000532279 LGALS3P17931 250 aaKnown RBP13.46□□□□□ -0.25
PPP1CA-207ENST00000532279 HIST1H2BOP23527 126 aa13.46□□□□□ -0.25
PPP1CA-207ENST00000532279 HIST1H2BBP33778 126 aa13.46□□□□□ -0.25
PPP1CA-207ENST00000532279 HIST1H2BDP58876 126 aa13.46□□□□□ -0.25
PPP1CA-207ENST00000532279 HIST1H2BCP62807 126 aa13.46□□□□□ -0.25
PPP1CA-207ENST00000532279 PRR4Q16378 134 aa13.46□□□□□ -0.25
PPP1CA-207ENST00000532279 HIST2H2BEQ16778 126 aa13.46□□□□□ -0.25
PPP1CA-207ENST00000532279 FAM229BQ4G0N7 80 aa13.46□□□□□ -0.25
PPP1CA-207ENST00000532279 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.46□□□□□ -0.25
PPP1CA-207ENST00000532279 HIST1H2BHQ93079 126 aa13.46□□□□□ -0.25
PPP1CA-207ENST00000532279 HIST1H2BNQ99877 126 aa13.46□□□□□ -0.25
PPP1CA-207ENST00000532279 HIST1H2BMQ99879 126 aa13.46□□□□□ -0.25
PPP1CA-207ENST00000532279 HIGD2AQ9BW72 106 aa13.46□□□□□ -0.25
PPP1CA-207ENST00000532279 IGKV2D-26A0A0A0MRZ7 120 aa13.43□□□□□ -0.26
PPP1CA-207ENST00000532279 PRYO14603 147 aa13.43□□□□□ -0.26
PPP1CA-207ENST00000532279 NMUP48645 174 aa13.43□□□□□ -0.26
PPP1CA-207ENST00000532279 LPAP08519 4548 aa13.4□□□□□ -0.26
PPP1CA-207ENST00000532279 TRBV10-3A0A0K0K1G6 114 aa13.4□□□□□ -0.26
PPP1CA-207ENST00000532279 SYS1-DBNDD2H3BUS1 97 aa13.39□□□□□ -0.27
PPP1CA-207ENST00000532279 KCNQ1DNQ9H478 68 aa13.39□□□□□ -0.27
PPP1CA-207ENST00000532279 MIEN1Q9BRT3 115 aa13.38□□□□□ -0.27
PPP1CA-207ENST00000532279 LOC107984156A0A0G2JMH3 177 aa13.37□□□□□ -0.27
PPP1CA-207ENST00000532279 E9PLD3 99 aa13.37□□□□□ -0.27
PPP1CA-207ENST00000532279 SPRR1AP35321 89 aa13.37□□□□□ -0.27
PPP1CA-207ENST00000532279 ARL17AQ8IVW1 177 aa13.37□□□□□ -0.27
PPP1CA-207ENST00000532279 ETDCA0A1B0GVM5 59 aa13.36□□□□□ -0.27
PPP1CA-207ENST00000532279 LINC00337Q8N6G1 96 aa13.36□□□□□ -0.27
PPP1CA-207ENST00000532279 LINC00304Q8N9R0 145 aa13.36□□□□□ -0.27
PPP1CA-207ENST00000532279 S100A12P80511 92 aa13.35□□□□□ -0.27
PPP1CA-207ENST00000532279 SPRR4Q96PI1 79 aa13.35□□□□□ -0.27
PPP1CA-207ENST00000532279 A0A0J9YXY3 114 aa13.34□□□□□ -0.27
PPP1CA-207ENST00000532279 DDTP30046 118 aa13.34□□□□□ -0.27
PPP1CA-207ENST00000532279 NPC2P61916 151 aa13.34□□□□□ -0.27
PPP1CA-207ENST00000532279 C3orf22Q8N5N4 141 aa13.34□□□□□ -0.27
PPP1CA-207ENST00000532279 TRBV10-2A0A0K0K1G8 114 aa13.33□□□□□ -0.28
PPP1CA-207ENST00000532279 KRTAP4-16G5E9R7 235 aaPredicted RBP13.33□□□□□ -0.28
PPP1CA-207ENST00000532279 LINC01545Q5VT33 79 aa13.32□□□□□ -0.28
PPP1CA-207ENST00000532279 SPANXB1Q9NS25 103 aaPredicted RBP13.32□□□□□ -0.28
PPP1CA-207ENST00000532279 ZNF706Q9Y5V0 76 aaPredicted RBP13.32□□□□□ -0.28
PPP1CA-207ENST00000532279 ADAMTSL4-AS1Q5T5F5 129 aa13.31□□□□□ -0.28
PPP1CA-207ENST00000532279 PET117Q6UWS5 81 aa13.31□□□□□ -0.28
PPP1CA-207ENST00000532279 SMCR5Q8TEV8 140 aa13.31□□□□□ -0.28
PPP1CA-207ENST00000532279 RNF213Q63HN8 5207 aa13.31□□□□□ -0.28
PPP1CA-207ENST00000532279 SOSTDC1Q6X4U4 206 aa13.3□□□□□ -0.28
PPP1CA-207ENST00000532279 NDUFC2O95298 119 aa13.29□□□□□ -0.28
PPP1CA-207ENST00000532279 S100A7L2Q5SY68 101 aa13.29□□□□□ -0.28
PPP1CA-207ENST00000532279 EIF4EBP3O60516 100 aaPredicted RBP13.28□□□□□ -0.28
PPP1CA-207ENST00000532279 C3orf79P0CE67 100 aa13.28□□□□□ -0.28
PPP1CA-207ENST00000532279 RETNLBQ9BQ08 111 aa13.28□□□□□ -0.28
PPP1CA-207ENST00000532279 B5MCH6 92 aa13.27□□□□□ -0.29
PPP1CA-207ENST00000532279 PPDPFQ9H3Y8 114 aa13.27□□□□□ -0.29
PPP1CA-207ENST00000532279 KRTDAPP60985 99 aa13.26□□□□□ -0.29
PPP1CA-207ENST00000532279 COA6Q5JTJ3 125 aaKnown RBP13.25□□□□□ -0.29
PPP1CA-207ENST00000532279 IGLV6-57P01721 117 aa13.24□□□□□ -0.29
PPP1CA-207ENST00000532279 ZNF815PA8K554 130 aa13.23□□□□□ -0.29
PPP1CA-207ENST00000532279 TTTY13Q9BZ97 58 aa13.23□□□□□ -0.29
PPP1CA-207ENST00000532279 TRAV23DV6A0A075B6W5 121 aa13.22□□□□□ -0.29
PPP1CA-207ENST00000532279 ERC2-IT1O76042 136 aa13.22□□□□□ -0.29
PPP1CA-207ENST00000532279 LITAFQ99732 161 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms