RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 TMEM238C9JI98 176 aa10.76□□□□□ -0.69
PKP3-208ENST00000531857 SFTA2Q6UW10 78 aa10.76□□□□□ -0.69
PKP3-208ENST00000531857 SRSF9Q13242 221 aaKnown RBP eCLIP10.75□□□□□ -0.69
PKP3-208ENST00000531857 LINC00242Q5T6M2 205 aa10.75□□□□□ -0.69
PKP3-208ENST00000531857 LINC01561Q8N1V8 128 aa10.75□□□□□ -0.69
PKP3-208ENST00000531857 COPS9Q8WXC6 57 aa10.75□□□□□ -0.69
PKP3-208ENST00000531857 TIMM17BO60830 172 aa10.74□□□□□ -0.69
PKP3-208ENST00000531857 FOXI1Q12951 378 aa10.74□□□□□ -0.69
PKP3-208ENST00000531857 REG3GQ6UW15 175 aa10.74□□□□□ -0.69
PKP3-208ENST00000531857 LINC00526Q96FQ7 95 aa10.74□□□□□ -0.69
PKP3-208ENST00000531857 PKIGQ9Y2B9 76 aa10.74□□□□□ -0.69
PKP3-208ENST00000531857 IGLV5-39A0A0G2JS06 123 aa10.73□□□□□ -0.69
PKP3-208ENST00000531857 TTTY13Q9BZ97 58 aa10.73□□□□□ -0.69
PKP3-208ENST00000531857 A0A0J9YXY3 114 aa10.72□□□□□ -0.69
PKP3-208ENST00000531857 TAX1BP3O14907 124 aa10.72□□□□□ -0.69
PKP3-208ENST00000531857 HERV-K104P63124 156 aa10.71□□□□□ -0.69
PKP3-208ENST00000531857 SS18Q15532 418 aa10.71□□□□□ -0.69
PKP3-208ENST00000531857 CDKN2A-AS1Q9UH64 79 aa10.71□□□□□ -0.69
PKP3-208ENST00000531857 NDUFA12Q9UI09 145 aa10.71□□□□□ -0.69
PKP3-208ENST00000531857 TRAV13-1A0A0B4J241 112 aa10.7□□□□□ -0.7
PKP3-208ENST00000531857 A0A1B0GWB2 263 aa10.7□□□□□ -0.7
PKP3-208ENST00000531857 C9orf118A6NHY6 69 aa10.7□□□□□ -0.7
PKP3-208ENST00000531857 RPL24P83731 157 aaKnown RBP10.7□□□□□ -0.7
PKP3-208ENST00000531857 RNASE13Q5GAN3 156 aaKnown RBP10.7□□□□□ -0.7
PKP3-208ENST00000531857 Q6ZRP5 223 aa10.7□□□□□ -0.7
PKP3-208ENST00000531857 PPDPFQ9H3Y8 114 aa10.7□□□□□ -0.7
PKP3-208ENST00000531857 LINC00474Q9P2X8 69 aa10.7□□□□□ -0.7
PKP3-208ENST00000531857 NDUFA1O15239 70 aa10.69□□□□□ -0.7
PKP3-208ENST00000531857 IFITM1P13164 125 aa10.69□□□□□ -0.7
PKP3-208ENST00000531857 XCL1P47992 114 aa10.69□□□□□ -0.7
PKP3-208ENST00000531857 TSPEAR-AS2P59090 65 aa10.68□□□□□ -0.7
PKP3-208ENST00000531857 SPINK8P0C7L1 97 aa10.67□□□□□ -0.7
PKP3-208ENST00000531857 FXYD2P54710 66 aa10.67□□□□□ -0.7
PKP3-208ENST00000531857 GTF2H5Q6ZYL4 71 aa10.67□□□□□ -0.7
PKP3-208ENST00000531857 CARD19Q96LW7 228 aa10.67□□□□□ -0.7
PKP3-208ENST00000531857 SPANXDQ9BXN6 97 aa10.67□□□□□ -0.7
PKP3-208ENST00000531857 SPANXCQ9NY87 97 aa10.67□□□□□ -0.7
PKP3-208ENST00000531857 LINC00959A0A1B0GUT2 108 aa10.66□□□□□ -0.7
PKP3-208ENST00000531857 LPAP08519 4548 aa10.66□□□□□ -0.7
PKP3-208ENST00000531857 A0A087WZ39 114 aa10.65□□□□□ -0.7
PKP3-208ENST00000531857 SMIM1B2RUZ4 78 aa10.65□□□□□ -0.7
PKP3-208ENST00000531857 UBE2V1Q13404 147 aa10.65□□□□□ -0.7
PKP3-208ENST00000531857 VAMP3Q15836 100 aa10.65□□□□□ -0.7
PKP3-208ENST00000531857 NHP2Q9NX24 153 aaKnown RBP10.65□□□□□ -0.7
PKP3-208ENST00000531857 IGHV3OR16-9A0A0B4J2B5 98 aa10.64□□□□□ -0.71
PKP3-208ENST00000531857 SYCNQ0VAF6 134 aa10.64□□□□□ -0.71
PKP3-208ENST00000531857 LYRM7Q5U5X0 104 aa10.64□□□□□ -0.71
PKP3-208ENST00000531857 FABP2P12104 132 aa10.63□□□□□ -0.71
PKP3-208ENST00000531857 A0A1W2PNN7 141 aa10.62□□□□□ -0.71
PKP3-208ENST00000531857 GAGE2BQ13066 116 aa10.62□□□□□ -0.71
PKP3-208ENST00000531857 ZNF561-AS1K7EIQ3 104 aa10.61□□□□□ -0.71
PKP3-208ENST00000531857 CD164L2Q6UWJ8 174 aa10.61□□□□□ -0.71
PKP3-208ENST00000531857 COX7B2Q8TF08 81 aa10.61□□□□□ -0.71
PKP3-208ENST00000531857 A0A0B4J2C4 111 aa10.6□□□□□ -0.71
PKP3-208ENST00000531857 CXCL5P42830 114 aa10.6□□□□□ -0.71
PKP3-208ENST00000531857 LOC107984640A0A0U1RRK4 108 aa10.59□□□□□ -0.71
PKP3-208ENST00000531857 A0A1W2PPM0 123 aa10.59□□□□□ -0.71
PKP3-208ENST00000531857 GAGE10A6NGK3 116 aa10.59□□□□□ -0.71
PKP3-208ENST00000531857 H3BUT2 72 aa10.59□□□□□ -0.71
PKP3-208ENST00000531857 ZNF625Q96I27 306 aaPredicted RBP10.59□□□□□ -0.71
PKP3-208ENST00000531857 PSORS1C2Q9UIG4 136 aa10.59□□□□□ -0.71
PKP3-208ENST00000531857 APOMO95445 188 aa10.58□□□□□ -0.72
PKP3-208ENST00000531857 LITAFQ99732 161 aa10.58□□□□□ -0.72
PKP3-208ENST00000531857 PRSS2P07478 247 aa10.57□□□□□ -0.72
PKP3-208ENST00000531857 Q8IZM0 81 aa10.57□□□□□ -0.72
PKP3-208ENST00000531857 RAB37Q96AX2 223 aa10.57□□□□□ -0.72
PKP3-208ENST00000531857 PRO1854Q9UHT4 67 aa10.57□□□□□ -0.72
PKP3-208ENST00000531857 COX7A2LO14548 114 aa10.56□□□□□ -0.72
PKP3-208ENST00000531857 C9orf116Q5BN46 136 aaPredicted RBP10.56□□□□□ -0.72
PKP3-208ENST00000531857 MUSTN1Q8IVN3 82 aa10.56□□□□□ -0.72
PKP3-208ENST00000531857 K7EP34 96 aa10.55□□□□□ -0.72
PKP3-208ENST00000531857 MEIG1Q5JSS6 88 aa10.55□□□□□ -0.72
PKP3-208ENST00000531857 A4D1N5 150 aa10.54□□□□□ -0.72
PKP3-208ENST00000531857 C6orf226Q5I0X4 101 aa10.54□□□□□ -0.72
PKP3-208ENST00000531857 C1orf137Q5JT78 98 aa10.54□□□□□ -0.72
PKP3-208ENST00000531857 PHF5AQ7RTV0 110 aaKnown RBP10.54□□□□□ -0.72
PKP3-208ENST00000531857 PRR26Q8N8Z3 221 aa10.54□□□□□ -0.72
PKP3-208ENST00000531857 CFC1BP0CG36 223 aa10.53□□□□□ -0.72
PKP3-208ENST00000531857 CFC1P0CG37 223 aa10.53□□□□□ -0.72
PKP3-208ENST00000531857 MALP21145 153 aa10.53□□□□□ -0.72
PKP3-208ENST00000531857 CAMK2N2Q96S95 79 aa10.53□□□□□ -0.72
PKP3-208ENST00000531857 SPCS1Q9Y6A9 102 aa10.53□□□□□ -0.72
PKP3-208ENST00000531857 TRBV20-1A0A075B6N2 111 aa10.52□□□□□ -0.73
PKP3-208ENST00000531857 COX17Q14061 63 aa10.52□□□□□ -0.73
PKP3-208ENST00000531857 ERG28Q9UKR5 140 aa10.52□□□□□ -0.73
PKP3-208ENST00000531857 RPL18AQ02543 176 aaKnown RBP10.51□□□□□ -0.73
PKP3-208ENST00000531857 C5orf38Q86SI9 138 aa10.51□□□□□ -0.73
PKP3-208ENST00000531857 F8WDY8 70 aa10.5□□□□□ -0.73
PKP3-208ENST00000531857 K7ERJ3 54 aa10.5□□□□□ -0.73
PKP3-208ENST00000531857 ADAMTSL4-AS1Q5T5F5 129 aa10.5□□□□□ -0.73
PKP3-208ENST00000531857 LINC00308Q8TCZ7 52 aa10.5□□□□□ -0.73
PKP3-208ENST00000531857 TOMM7Q9P0U1 55 aa10.5□□□□□ -0.73
PKP3-208ENST00000531857 IGLV7-43P04211 117 aa10.49□□□□□ -0.73
PKP3-208ENST00000531857 CKS1BP61024 79 aa10.49□□□□□ -0.73
PKP3-208ENST00000531857 KRTAP11-1Q8IUC1 163 aa10.49□□□□□ -0.73
PKP3-208ENST00000531857 C2orf48Q96LS8 159 aa10.49□□□□□ -0.73
PKP3-208ENST00000531857 COX6CP09669 75 aa10.48□□□□□ -0.73
PKP3-208ENST00000531857 DIRC1Q969H9 104 aa10.47□□□□□ -0.73
PKP3-208ENST00000531857 FAM168BA1KXE4 195 aa10.46□□□□□ -0.73
PKP3-208ENST00000531857 F8W1H4 67 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms