RNA–Protein interactions for RNA: ENST00000531733.1

FDFT1-220, Transcript of farnesyl-diphosphate farnesyltransferase 1, human

TSL 2

Gene FDFT1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDFT1-220	ENST00000531733	SPAG11A	Q6PDA7	123 aa		11.87	□□□□□ -0.51
FDFT1-220	ENST00000531733	C11orf86	A6NJI1	115 aa		11.86	□□□□□ -0.51
FDFT1-220	ENST00000531733	FABP9	Q0Z7S8	132 aa		11.86	□□□□□ -0.51
FDFT1-220	ENST00000531733	FP248	Q71RG6	208 aa	Predicted RBP	11.86	□□□□□ -0.51
FDFT1-220	ENST00000531733	PMCHL1	Q16048	86 aa		11.85	□□□□□ -0.51
FDFT1-220	ENST00000531733		Q8NBF4	154 aa		11.85	□□□□□ -0.51
FDFT1-220	ENST00000531733		A0A0U1RRA0	63 aa		11.84	□□□□□ -0.51
FDFT1-220	ENST00000531733	TMEM218	A2RU14	115 aa		11.84	□□□□□ -0.51
FDFT1-220	ENST00000531733	ASB16-AS1	Q495Z4	193 aa		11.83	□□□□□ -0.52
FDFT1-220	ENST00000531733	CLLU1	Q5K131	121 aa		11.83	□□□□□ -0.52
FDFT1-220	ENST00000531733	S100P	P25815	95 aa		11.82	□□□□□ -0.52
FDFT1-220	ENST00000531733	LINC00158	P58513	81 aa		11.82	□□□□□ -0.52
FDFT1-220	ENST00000531733	TMEM170B	Q5T4T1	132 aa		11.82	□□□□□ -0.52
FDFT1-220	ENST00000531733	LINC00337	Q8N6G1	96 aa		11.82	□□□□□ -0.52
FDFT1-220	ENST00000531733	C4orf48	Q5BLP8	95 aa		11.8	□□□□□ -0.52
FDFT1-220	ENST00000531733	BAGE3	Q86Y29	109 aa		11.8	□□□□□ -0.52
FDFT1-220	ENST00000531733	C18orf32	Q8TCD1	76 aa		11.79	□□□□□ -0.52
FDFT1-220	ENST00000531733	HBD	P02042	147 aa		11.78	□□□□□ -0.52
FDFT1-220	ENST00000531733	SMCR5	Q8TEV8	140 aa		11.78	□□□□□ -0.52
FDFT1-220	ENST00000531733	ZNF706	Q9Y5V0	76 aa	Predicted RBP	11.78	□□□□□ -0.52
FDFT1-220	ENST00000531733	FSIP2	Q5CZC0	6907 aa		11.77	□□□□□ -0.52
FDFT1-220	ENST00000531733	NCR3	O14931	201 aa		11.77	□□□□□ -0.53
FDFT1-220	ENST00000531733	LINC00614	P0C842	121 aa		11.77	□□□□□ -0.53
FDFT1-220	ENST00000531733	SPRR1A	P35321	89 aa		11.77	□□□□□ -0.53
FDFT1-220	ENST00000531733	COX19	Q49B96	90 aa		11.77	□□□□□ -0.53
FDFT1-220	ENST00000531733	UQCC3	Q6UW78	93 aa		11.77	□□□□□ -0.53
FDFT1-220	ENST00000531733	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	11.76	□□□□□ -0.53
FDFT1-220	ENST00000531733	PRY	O14603	147 aa		11.76	□□□□□ -0.53
FDFT1-220	ENST00000531733	SFTA2	Q6UW10	78 aa		11.76	□□□□□ -0.53
FDFT1-220	ENST00000531733	SMIM13	P0DJ93	91 aa		11.75	□□□□□ -0.53
FDFT1-220	ENST00000531733	LINC01547	P58512	204 aa	Predicted RBP	11.75	□□□□□ -0.53
FDFT1-220	ENST00000531733	SEC11C	Q9BY50	192 aa		11.75	□□□□□ -0.53
FDFT1-220	ENST00000531733	LCE2D	Q5TA82	110 aa	Predicted RBP	11.74	□□□□□ -0.53
FDFT1-220	ENST00000531733	BOD1L2	Q8IYS8	172 aa		11.74	□□□□□ -0.53
FDFT1-220	ENST00000531733	KCNQ1DN	Q9H478	68 aa		11.74	□□□□□ -0.53
FDFT1-220	ENST00000531733	TMEM223	A0PJW6	202 aa		11.73	□□□□□ -0.53
FDFT1-220	ENST00000531733	SPINK1	P00995	79 aa		11.73	□□□□□ -0.53
FDFT1-220	ENST00000531733	LINC00483	Q53H64	154 aa		11.73	□□□□□ -0.53
FDFT1-220	ENST00000531733	CHTOP	Q9Y3Y2	248 aa	Known RBP	11.73	□□□□□ -0.53
FDFT1-220	ENST00000531733	ERC2-IT1	O76042	136 aa		11.71	□□□□□ -0.53
FDFT1-220	ENST00000531733	TRBV10-3	A0A0K0K1G6	114 aa		11.7	□□□□□ -0.54
FDFT1-220	ENST00000531733	IFITM2	Q01629	132 aa		11.7	□□□□□ -0.54
FDFT1-220	ENST00000531733	GAGE2A	Q6NT46	116 aa		11.7	□□□□□ -0.54
FDFT1-220	ENST00000531733	MIR7-3HG	Q8N6C7	128 aa		11.7	□□□□□ -0.54
FDFT1-220	ENST00000531733	TRAPPC1	Q9Y5R8	145 aa		11.7	□□□□□ -0.54
FDFT1-220	ENST00000531733	ETDC	A0A1B0GVM5	59 aa		11.69	□□□□□ -0.54
FDFT1-220	ENST00000531733	SEC61B	P60468	96 aa	Known RBP	11.69	□□□□□ -0.54
FDFT1-220	ENST00000531733	MOBP	Q13875	183 aa		11.69	□□□□□ -0.54
FDFT1-220	ENST00000531733		Q8N377	158 aa		11.69	□□□□□ -0.54
FDFT1-220	ENST00000531733	RPS10P5	Q9NQ39	176 aa		11.69	□□□□□ -0.54
FDFT1-220	ENST00000531733	IGLV9-49	A0A0B4J1Y8	123 aa		11.68	□□□□□ -0.54
FDFT1-220	ENST00000531733	MEIG1	Q5JSS6	88 aa		11.67	□□□□□ -0.54
FDFT1-220	ENST00000531733		B5MCH6	92 aa		11.66	□□□□□ -0.54
FDFT1-220	ENST00000531733	ATP6V1G1	O75348	118 aa		11.66	□□□□□ -0.54
FDFT1-220	ENST00000531733	C10orf91	Q5T1B1	145 aa		11.66	□□□□□ -0.54
FDFT1-220	ENST00000531733	LCE2C	Q5TA81	110 aa		11.65	□□□□□ -0.54
FDFT1-220	ENST00000531733	RHEB	Q15382	184 aa		11.64	□□□□□ -0.55
FDFT1-220	ENST00000531733		Q9BRP9	147 aa		11.64	□□□□□ -0.55
FDFT1-220	ENST00000531733	TRAV12-1	A0A0B4J245	112 aa		11.63	□□□□□ -0.55
FDFT1-220	ENST00000531733	XP32	Q5T750	250 aa		11.63	□□□□□ -0.55
FDFT1-220	ENST00000531733	COMMD7	Q86VX2	200 aa		11.63	□□□□□ -0.55
FDFT1-220	ENST00000531733	CRCT1	Q9UGL9	99 aa		11.63	□□□□□ -0.55
FDFT1-220	ENST00000531733	RPS29	P62273	56 aa	Known RBP	11.61	□□□□□ -0.55
FDFT1-220	ENST00000531733	IFI27L1	Q96BM0	104 aa		11.61	□□□□□ -0.55
FDFT1-220	ENST00000531733	SSBP3-AS1	Q7Z2R9	100 aa		11.6	□□□□□ -0.55
FDFT1-220	ENST00000531733	NDUFA12	Q9UI09	145 aa		11.6	□□□□□ -0.55
FDFT1-220	ENST00000531733	TSPEAR-AS2	P59090	65 aa		11.59	□□□□□ -0.55
FDFT1-220	ENST00000531733	HERV-K104	P63124	156 aa		11.59	□□□□□ -0.55
FDFT1-220	ENST00000531733	KRTAP19-2	Q3LHN2	52 aa		11.59	□□□□□ -0.55
FDFT1-220	ENST00000531733	SLC25A20	O43772	301 aa		11.58	□□□□□ -0.56
FDFT1-220	ENST00000531733	FAM19A2	Q8N3H0	131 aa		11.58	□□□□□ -0.56
FDFT1-220	ENST00000531733	DDT	P30046	118 aa		11.57	□□□□□ -0.56
FDFT1-220	ENST00000531733		Q6ZRX8	168 aa		11.56	□□□□□ -0.56
FDFT1-220	ENST00000531733	LOC107984156	A0A0G2JMH3	177 aa		11.54	□□□□□ -0.56
FDFT1-220	ENST00000531733	MYMX	A0A1B0GTQ4	84 aa		11.54	□□□□□ -0.56
FDFT1-220	ENST00000531733	ARL17A	Q8IVW1	177 aa		11.54	□□□□□ -0.56
FDFT1-220	ENST00000531733	CHCHD1	Q96BP2	118 aa	Known RBP	11.53	□□□□□ -0.56
FDFT1-220	ENST00000531733	LINC00587	B1AMM8	73 aa		11.52	□□□□□ -0.57
FDFT1-220	ENST00000531733	MAP1LC3C	Q9BXW4	147 aa		11.52	□□□□□ -0.57
FDFT1-220	ENST00000531733	TRBV10-2	A0A0K0K1G8	114 aa		11.51	□□□□□ -0.57
FDFT1-220	ENST00000531733	S100A12	P80511	92 aa		11.51	□□□□□ -0.57
FDFT1-220	ENST00000531733	C9orf153	Q5TBE3	101 aa		11.51	□□□□□ -0.57
FDFT1-220	ENST00000531733	ST20-AS1	Q8NBB2	130 aa		11.51	□□□□□ -0.57
FDFT1-220	ENST00000531733	MT1H	P80294	61 aa		11.5	□□□□□ -0.57
FDFT1-220	ENST00000531733		H0Y8G0	127 aa		11.49	□□□□□ -0.57
FDFT1-220	ENST00000531733	IGLV6-57	P01721	117 aa		11.48	□□□□□ -0.57
FDFT1-220	ENST00000531733	YPEL4	Q96NS1	127 aa		11.48	□□□□□ -0.57
FDFT1-220	ENST00000531733	LEPROT	O15243	131 aa		11.47	□□□□□ -0.57
FDFT1-220	ENST00000531733	EIF4EBP3	O60516	100 aa	Predicted RBP	11.47	□□□□□ -0.57
FDFT1-220	ENST00000531733	SPANXB1	Q9NS25	103 aa	Predicted RBP	11.47	□□□□□ -0.57
FDFT1-220	ENST00000531733	APOC3	P02656	99 aa		11.46	□□□□□ -0.57
FDFT1-220	ENST00000531733	PCOTH	Q58A44	107 aa		11.45	□□□□□ -0.58
FDFT1-220	ENST00000531733	SOSTDC1	Q6X4U4	206 aa		11.45	□□□□□ -0.58
FDFT1-220	ENST00000531733	TRAV23DV6	A0A075B6W5	121 aa		11.44	□□□□□ -0.58
FDFT1-220	ENST00000531733	S100A7L2	Q5SY68	101 aa		11.44	□□□□□ -0.58
FDFT1-220	ENST00000531733		J3QQQ9	107 aa		11.43	□□□□□ -0.58
FDFT1-220	ENST00000531733	HSBP1	O75506	76 aa		11.42	□□□□□ -0.58
FDFT1-220	ENST00000531733	NDUFC2	O95298	119 aa		11.42	□□□□□ -0.58
FDFT1-220	ENST00000531733	NPC2	P61916	151 aa		11.42	□□□□□ -0.58
FDFT1-220	ENST00000531733	IGLV8-61	A0A075B6I0	122 aa		11.41	□□□□□ -0.58

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