RNA–Protein interactions for RNA: ENST00000531594.1

RC3H1-206, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-206ENST00000531594 FAM24AA6NFZ4 105 aa-1.05□□□□□ -2.58
RC3H1-206ENST00000531594 MT1BP07438 61 aa-1.05□□□□□ -2.58
RC3H1-206ENST00000531594 SAA2P0DJI9 122 aaPredicted RBP-1.05□□□□□ -2.58
RC3H1-206ENST00000531594 GNGT1P63211 74 aa-1.05□□□□□ -2.58
RC3H1-206ENST00000531594 HSD52Q0P140 79 aa-1.05□□□□□ -2.58
RC3H1-206ENST00000531594 DEFB107AQ8IZN7 70 aa-1.05□□□□□ -2.58
RC3H1-206ENST00000531594 PAIP2BQ9ULR5 123 aaKnown RBP-1.05□□□□□ -2.58
RC3H1-206ENST00000531594 NBEAQ8NFP9 2946 aa-1.05□□□□□ -2.58
RC3H1-206ENST00000531594 PKD1L2Q7Z442 2459 aa-1.05□□□□□ -2.58
RC3H1-206ENST00000531594 CMYA5Q8N3K9 4069 aa-1.05□□□□□ -2.58
RC3H1-206ENST00000531594 ARHGEF5Q12774 1597 aa-1.05□□□□□ -2.58
RC3H1-206ENST00000531594 TRIOO75962 3097 aa-1.05□□□□□ -2.58
RC3H1-206ENST00000531594 GCN1Q92616 2671 aaKnown RBP-1.05□□□□□ -2.58
RC3H1-206ENST00000531594 DMXL1Q9Y485 3027 aa-1.05□□□□□ -2.58
RC3H1-206ENST00000531594 CEP295Q9C0D2 2601 aa-1.05□□□□□ -2.58
RC3H1-206ENST00000531594 CHD7Q9P2D1 2997 aa-1.05□□□□□ -2.58
RC3H1-206ENST00000531594 ANKRD50Q9ULJ7 1429 aa-1.06□□□□□ -2.58
RC3H1-206ENST00000531594 A0A0G2JMZ2 1700 aa-1.06□□□□□ -2.58
RC3H1-206ENST00000531594 AKAIN1P0CW23 69 aa-1.06□□□□□ -2.58
RC3H1-206ENST00000531594 VAMP8Q9BV40 100 aa-1.06□□□□□ -2.58
RC3H1-206ENST00000531594 EHBP1L1Q8N3D4 1523 aa-1.06□□□□□ -2.58
RC3H1-206ENST00000531594 NAIPQ13075 1403 aa-1.06□□□□□ -2.58
RC3H1-206ENST00000531594 PTPN23Q9H3S7 1636 aa-1.07□□□□□ -2.58
RC3H1-206ENST00000531594 ADAMTS12P58397 1594 aa-1.07□□□□□ -2.58
RC3H1-206ENST00000531594 A0A0G2JND7 137 aa-1.07□□□□□ -2.58
RC3H1-206ENST00000531594 SPTY2D1-AS1A0A0U1RR47 76 aa-1.07□□□□□ -2.58
RC3H1-206ENST00000531594 LOC105371267A0A1B0GV96 52 aa-1.07□□□□□ -2.58
RC3H1-206ENST00000531594 NAP1L6A6NFF2 107 aa-1.07□□□□□ -2.58
RC3H1-206ENST00000531594 H3BQF6 201 aa-1.07□□□□□ -2.58
RC3H1-206ENST00000531594 SNAPC5O75971 98 aa-1.07□□□□□ -2.58
RC3H1-206ENST00000531594 ARMS2P0C7Q2 107 aa-1.07□□□□□ -2.58
RC3H1-206ENST00000531594 FGF7P21781 194 aa-1.07□□□□□ -2.58
RC3H1-206ENST00000531594 CEP152O94986 1710 aa-1.07□□□□□ -2.58
RC3H1-206ENST00000531594 COL4A6Q14031 1691 aa-1.07□□□□□ -2.58
RC3H1-206ENST00000531594 UTP20O75691 2785 aaKnown RBP-1.08□□□□□ -2.58
RC3H1-206ENST00000531594 KTN1Q86UP2 1357 aaKnown RBP-1.08□□□□□ -2.58
RC3H1-206ENST00000531594 XRN1Q8IZH2 1706 aaKnown RBP-1.08□□□□□ -2.58
RC3H1-206ENST00000531594 CCDC58Q4VC31 144 aa-1.08□□□□□ -2.58
RC3H1-206ENST00000531594 MT1MQ8N339 61 aa-1.08□□□□□ -2.58
RC3H1-206ENST00000531594 KNL1Q8NG31 2342 aa-1.08□□□□□ -2.58
RC3H1-206ENST00000531594 DNAH5Q8TE73 4624 aa-1.08□□□□□ -2.58
RC3H1-206ENST00000531594 ITPR2Q14571 2701 aa-1.08□□□□□ -2.58
RC3H1-206ENST00000531594 SCAPERQ9BY12 1400 aa-1.08□□□□□ -2.58
RC3H1-206ENST00000531594 DNAH17Q9UFH2 4485 aa-1.08□□□□□ -2.58
RC3H1-206ENST00000531594 FRYQ5TBA9 3013 aa-1.08□□□□□ -2.58
RC3H1-206ENST00000531594 KNDC1Q76NI1 1749 aa-1.09□□□□□ -2.58
RC3H1-206ENST00000531594 MARF1Q9Y4F3 1742 aaKnown RBP-1.09□□□□□ -2.58
RC3H1-206ENST00000531594 KALRNO60229 2985 aa-1.09□□□□□ -2.58
RC3H1-206ENST00000531594 TRBV7-7A0A0K0K1E9 115 aa-1.09□□□□□ -2.58
RC3H1-206ENST00000531594 CRYM-AS1A6NIL9 109 aa-1.09□□□□□ -2.58
RC3H1-206ENST00000531594 H0Y9P7 68 aa-1.09□□□□□ -2.58
RC3H1-206ENST00000531594 K7EP13 123 aa-1.09□□□□□ -2.58
RC3H1-206ENST00000531594 MT2AP02795 61 aa-1.09□□□□□ -2.58
RC3H1-206ENST00000531594 MT1EP04732 61 aa-1.09□□□□□ -2.58
RC3H1-206ENST00000531594 ATP5EP56381 51 aaPredicted RBP-1.09□□□□□ -2.58
RC3H1-206ENST00000531594 PP6455Q8WZ26 134 aa-1.09□□□□□ -2.58
RC3H1-206ENST00000531594 SRCAPQ6ZRS2 3230 aa-1.09□□□□□ -2.58
RC3H1-206ENST00000531594 CLIP1P30622 1438 aa-1.09□□□□□ -2.58
RC3H1-206ENST00000531594 TRANK1O15050 2925 aa-1.09□□□□□ -2.58
RC3H1-206ENST00000531594 CSMD1Q96PZ7 3565 aa-1.1□□□□□ -2.59
RC3H1-206ENST00000531594 CFAP46Q8IYW2 2715 aa-1.1□□□□□ -2.59
RC3H1-206ENST00000531594 TMEM262E9PQX1 116 aa-1.1□□□□□ -2.59
RC3H1-206ENST00000531594 ASIPP42127 132 aa-1.1□□□□□ -2.59
RC3H1-206ENST00000531594 KRTAP19-5Q3LI72 72 aa-1.1□□□□□ -2.59
RC3H1-206ENST00000531594 SVBPQ8N300 66 aa-1.1□□□□□ -2.59
RC3H1-206ENST00000531594 MT1LQ93083 61 aa-1.1□□□□□ -2.59
RC3H1-206ENST00000531594 PSENENQ9NZ42 101 aa-1.1□□□□□ -2.59
RC3H1-206ENST00000531594 DNAH7Q8WXX0 4024 aa-1.1□□□□□ -2.59
RC3H1-206ENST00000531594 ZZEF1O43149 2961 aa-1.11□□□□□ -2.59
RC3H1-206ENST00000531594 CICQ96RK0 1608 aaPredicted RBP-1.11□□□□□ -2.59
RC3H1-206ENST00000531594 MBD5Q9P267 1494 aa-1.11□□□□□ -2.59
RC3H1-206ENST00000531594 EDC4Q6P2E9 1401 aaKnown RBP-1.11□□□□□ -2.59
RC3H1-206ENST00000531594 NCOA3Q9Y6Q9 1424 aa-1.11□□□□□ -2.59
RC3H1-206ENST00000531594 NDUFA2O43678 99 aa-1.11□□□□□ -2.59
RC3H1-206ENST00000531594 ROBO1Q9Y6N7 1651 aa-1.11□□□□□ -2.59
RC3H1-206ENST00000531594 DNAH8Q96JB1 4490 aa-1.11□□□□□ -2.59
RC3H1-206ENST00000531594 REV3LO60673 3130 aa-1.12□□□□□ -2.59
RC3H1-206ENST00000531594 MT1GP13640 62 aa-1.12□□□□□ -2.59
RC3H1-206ENST00000531594 DEFB110Q30KQ9 67 aa-1.12□□□□□ -2.59
RC3H1-206ENST00000531594 NMSQ5H8A3 153 aa-1.12□□□□□ -2.59
RC3H1-206ENST00000531594 C5orf42Q9H799 3197 aa-1.12□□□□□ -2.59
RC3H1-206ENST00000531594 SCN7AQ01118 1682 aa-1.13□□□□□ -2.59
RC3H1-206ENST00000531594 KRTDAPP60985 99 aa-1.13□□□□□ -2.59
RC3H1-206ENST00000531594 KRTAP19-6Q3LI70 58 aa-1.13□□□□□ -2.59
RC3H1-206ENST00000531594 C1orf54Q8WWF1 131 aa-1.13□□□□□ -2.59
RC3H1-206ENST00000531594 TSC22D3Q99576 134 aa-1.13□□□□□ -2.59
RC3H1-206ENST00000531594 CGREF1Q99674 301 aa-1.13□□□□□ -2.59
RC3H1-206ENST00000531594 A2ML1A8K2U0 1454 aa-1.13□□□□□ -2.59
RC3H1-206ENST00000531594 MYH7P12883 1935 aa-1.13□□□□□ -2.59
RC3H1-206ENST00000531594 ACACBO00763 2458 aa-1.13□□□□□ -2.59
RC3H1-206ENST00000531594 PSMG4Q5JS54 123 aa-1.14□□□□□ -2.59
RC3H1-206ENST00000531594 DNAH10Q8IVF4 4471 aa-1.14□□□□□ -2.59
RC3H1-206ENST00000531594 SMG1Q96Q15 3661 aaKnown RBP-1.15□□□□□ -2.59
RC3H1-206ENST00000531594 COL14A1Q05707 1796 aaKnown RBP-1.15□□□□□ -2.59
RC3H1-206ENST00000531594 hADV29S1A0JD25 119 aa-1.15□□□□□ -2.59
RC3H1-206ENST00000531594 NDUFA3O95167 84 aa-1.15□□□□□ -2.59
RC3H1-206ENST00000531594 FAM107BQ9H098 131 aa-1.15□□□□□ -2.59
RC3H1-206ENST00000531594 CACFD1Q9UGQ2 172 aa-1.15□□□□□ -2.59
RC3H1-206ENST00000531594 AP4S1Q9Y587 144 aa-1.15□□□□□ -2.59
RC3H1-206ENST00000531594 S4R3F8 94 aa-1.15□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms