RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 MAJINQ3KP22 176 aa4.42□□□□□ -1.7
TRIM53CP-201ENST00000531490 C2orf88Q9BSF0 95 aa4.42□□□□□ -1.7
TRIM53CP-201ENST00000531490 CST9LQ9H4G1 147 aa4.42□□□□□ -1.7
TRIM53CP-201ENST00000531490 IGLV4-3A0A075B6K6 122 aa4.41□□□□□ -1.7
TRIM53CP-201ENST00000531490 IGHV3-64A0A075B6Q5 118 aa4.41□□□□□ -1.7
TRIM53CP-201ENST00000531490 IGHV3OR16-9A0A0B4J2B5 98 aa4.41□□□□□ -1.7
TRIM53CP-201ENST00000531490 IGHV1-58A0A0C4DH39 117 aa4.41□□□□□ -1.7
TRIM53CP-201ENST00000531490 SEC11AP67812 179 aa4.41□□□□□ -1.7
TRIM53CP-201ENST00000531490 MRPS36P82909 103 aaKnown RBP4.41□□□□□ -1.7
TRIM53CP-201ENST00000531490 BOD1L2Q8IYS8 172 aa4.41□□□□□ -1.7
TRIM53CP-201ENST00000531490 STPG4Q8N801 248 aa4.41□□□□□ -1.7
TRIM53CP-201ENST00000531490 DPH3Q96FX2 82 aa4.41□□□□□ -1.7
TRIM53CP-201ENST00000531490 LPAP08519 4548 aa4.41□□□□□ -1.7
TRIM53CP-201ENST00000531490 IGLV4-69A0A075B6H9 119 aa4.4□□□□□ -1.7
TRIM53CP-201ENST00000531490 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.4□□□□□ -1.7
TRIM53CP-201ENST00000531490 C11orf86A6NJI1 115 aa4.4□□□□□ -1.7
TRIM53CP-201ENST00000531490 COX7A2LO14548 114 aa4.4□□□□□ -1.7
TRIM53CP-201ENST00000531490 NMUP48645 174 aa4.4□□□□□ -1.7
TRIM53CP-201ENST00000531490 CIRBPQ14011 172 aaKnown RBP4.4□□□□□ -1.7
TRIM53CP-201ENST00000531490 AMELXQ99217 191 aa4.4□□□□□ -1.7
TRIM53CP-201ENST00000531490 HIGD1BQ9P298 99 aa4.4□□□□□ -1.7
TRIM53CP-201ENST00000531490 A0A087WYN8 130 aa4.4□□□□□ -1.71
TRIM53CP-201ENST00000531490 IGKV2-24A0A0C4DH68 120 aa4.4□□□□□ -1.71
TRIM53CP-201ENST00000531490 E9PLD3 99 aa4.4□□□□□ -1.71
TRIM53CP-201ENST00000531490 COL5A1-AS1Q5SY13 56 aa4.4□□□□□ -1.71
TRIM53CP-201ENST00000531490 LINC00242Q5T6M2 205 aa4.4□□□□□ -1.71
TRIM53CP-201ENST00000531490 Q6ZRU5 148 aa4.4□□□□□ -1.71
TRIM53CP-201ENST00000531490 A0A096LNI7 61 aa4.39□□□□□ -1.71
TRIM53CP-201ENST00000531490 A0A0A0MQY5 61 aa4.39□□□□□ -1.71
TRIM53CP-201ENST00000531490 A0A0J9YXV3 536 aa4.39□□□□□ -1.71
TRIM53CP-201ENST00000531490 TINCRA0A1B0GVN0 87 aa4.39□□□□□ -1.71
TRIM53CP-201ENST00000531490 UBE2D1P51668 147 aa4.39□□□□□ -1.71
TRIM53CP-201ENST00000531490 SYCNQ0VAF6 134 aa4.39□□□□□ -1.71
TRIM53CP-201ENST00000531490 TAL2Q16559 108 aa4.39□□□□□ -1.71
TRIM53CP-201ENST00000531490 TMEM170BQ5T4T1 132 aa4.39□□□□□ -1.71
TRIM53CP-201ENST00000531490 SPACA4Q8TDM5 124 aa4.39□□□□□ -1.71
TRIM53CP-201ENST00000531490 SNHG12Q9BXW3 62 aa4.39□□□□□ -1.71
TRIM53CP-201ENST00000531490 MYMXA0A1B0GTQ4 84 aa4.38□□□□□ -1.71
TRIM53CP-201ENST00000531490 A6NDN8 102 aa4.38□□□□□ -1.71
TRIM53CP-201ENST00000531490 H3BRM9 83 aa4.38□□□□□ -1.71
TRIM53CP-201ENST00000531490 HERVK_113P63121 156 aa4.38□□□□□ -1.71
TRIM53CP-201ENST00000531490 HSD52Q0P140 79 aa4.38□□□□□ -1.71
TRIM53CP-201ENST00000531490 PLEKHB2Q96CS7 222 aa4.38□□□□□ -1.71
TRIM53CP-201ENST00000531490 GEMIN7Q9H840 131 aaKnown RBP4.38□□□□□ -1.71
TRIM53CP-201ENST00000531490 MUC2Q02817 5179 aa4.37□□□□□ -1.71
TRIM53CP-201ENST00000531490 A0A087WZ39 114 aa4.37□□□□□ -1.71
TRIM53CP-201ENST00000531490 LEPROTO15243 131 aa4.37□□□□□ -1.71
TRIM53CP-201ENST00000531490 LGALS3P17931 250 aaKnown RBP4.37□□□□□ -1.71
TRIM53CP-201ENST00000531490 HINT1P49773 126 aaPredicted RBP4.37□□□□□ -1.71
TRIM53CP-201ENST00000531490 KIAA0087Q14695 138 aa4.37□□□□□ -1.71
TRIM53CP-201ENST00000531490 BATFQ16520 125 aa4.37□□□□□ -1.71
TRIM53CP-201ENST00000531490 UNQ6190/PRO20217Q6UXQ8 127 aa4.37□□□□□ -1.71
TRIM53CP-201ENST00000531490 FAM19A3Q7Z5A8 133 aa4.37□□□□□ -1.71
TRIM53CP-201ENST00000531490 ORAOV1Q8WV07 137 aa4.37□□□□□ -1.71
TRIM53CP-201ENST00000531490 CARD19Q96LW7 228 aa4.37□□□□□ -1.71
TRIM53CP-201ENST00000531490 CAMK2N2Q96S95 79 aa4.37□□□□□ -1.71
TRIM53CP-201ENST00000531490 PLAC8Q9NZF1 115 aa4.37□□□□□ -1.71
TRIM53CP-201ENST00000531490 IGKV2D-26A0A0A0MRZ7 120 aa4.36□□□□□ -1.71
TRIM53CP-201ENST00000531490 TMEM223A0PJW6 202 aa4.36□□□□□ -1.71
TRIM53CP-201ENST00000531490 APOMO95445 188 aa4.36□□□□□ -1.71
TRIM53CP-201ENST00000531490 SPAG11BQ08648 103 aa4.36□□□□□ -1.71
TRIM53CP-201ENST00000531490 BVES-AS1Q5T3Y7 98 aa4.36□□□□□ -1.71
TRIM53CP-201ENST00000531490 C2orf82Q6UX34 121 aa4.36□□□□□ -1.71
TRIM53CP-201ENST00000531490 C2orf91Q6ZV80 131 aa4.36□□□□□ -1.71
TRIM53CP-201ENST00000531490 PCP2Q8IVA1 136 aa4.36□□□□□ -1.71
TRIM53CP-201ENST00000531490 C2orf48Q96LS8 159 aa4.36□□□□□ -1.71
TRIM53CP-201ENST00000531490 A0A1W2PNN7 141 aa4.35□□□□□ -1.71
TRIM53CP-201ENST00000531490 ZNF815PA8K554 130 aa4.35□□□□□ -1.71
TRIM53CP-201ENST00000531490 J3QQQ9 107 aa4.35□□□□□ -1.71
TRIM53CP-201ENST00000531490 ZNF22P17026 224 aaPredicted RBP4.35□□□□□ -1.71
TRIM53CP-201ENST00000531490 GAGE2BQ13066 116 aa4.35□□□□□ -1.71
TRIM53CP-201ENST00000531490 SCGB1D4Q6XE38 83 aa4.35□□□□□ -1.71
TRIM53CP-201ENST00000531490 CDKN2A-AS1Q9UH64 79 aa4.35□□□□□ -1.71
TRIM53CP-201ENST00000531490 IGLV5-45A0A087WSX0 123 aa4.34□□□□□ -1.71
TRIM53CP-201ENST00000531490 LOC107984640A0A0U1RRK4 108 aa4.34□□□□□ -1.71
TRIM53CP-201ENST00000531490 PRSS2P07478 247 aa4.34□□□□□ -1.71
TRIM53CP-201ENST00000531490 C9orf116Q5BN46 136 aaPredicted RBP4.34□□□□□ -1.71
TRIM53CP-201ENST00000531490 CEND1Q8N111 149 aa4.34□□□□□ -1.71
TRIM53CP-201ENST00000531490 LINC00469Q8N7U9 141 aa4.34□□□□□ -1.71
TRIM53CP-201ENST00000531490 HIST1H4GQ99525 98 aa4.34□□□□□ -1.71
TRIM53CP-201ENST00000531490 SPANXB1Q9NS25 103 aaPredicted RBP4.34□□□□□ -1.71
TRIM53CP-201ENST00000531490 C6orf48Q9UBA6 75 aa4.34□□□□□ -1.71
TRIM53CP-201ENST00000531490 FAT4Q6V0I7 4981 aa4.34□□□□□ -1.71
TRIM53CP-201ENST00000531490 SMIM13P0DJ93 91 aa4.33□□□□□ -1.72
TRIM53CP-201ENST00000531490 SRSF9Q13242 221 aaKnown RBP eCLIP4.33□□□□□ -1.72
TRIM53CP-201ENST00000531490 Q6ZRP5 223 aa4.33□□□□□ -1.72
TRIM53CP-201ENST00000531490 COPS9Q8WXC6 57 aa4.33□□□□□ -1.72
TRIM53CP-201ENST00000531490 A0A1B0GV90 55 aa4.32□□□□□ -1.72
TRIM53CP-201ENST00000531490 FAM168BA1KXE4 195 aa4.32□□□□□ -1.72
TRIM53CP-201ENST00000531490 TMEM238C9JI98 176 aa4.32□□□□□ -1.72
TRIM53CP-201ENST00000531490 NDUFA1O15239 70 aa4.32□□□□□ -1.72
TRIM53CP-201ENST00000531490 RPL18AQ02543 176 aaKnown RBP4.32□□□□□ -1.72
TRIM53CP-201ENST00000531490 SFTA2Q6UW10 78 aa4.32□□□□□ -1.72
TRIM53CP-201ENST00000531490 Q6ZVH6 145 aa4.32□□□□□ -1.72
TRIM53CP-201ENST00000531490 KRTAP7-1Q8IUC3 87 aa4.32□□□□□ -1.72
TRIM53CP-201ENST00000531490 LINC01561Q8N1V8 128 aa4.32□□□□□ -1.72
TRIM53CP-201ENST00000531490 TOMM7Q9P0U1 55 aa4.32□□□□□ -1.72
TRIM53CP-201ENST00000531490 LINC00474Q9P2X8 69 aa4.32□□□□□ -1.72
TRIM53CP-201ENST00000531490 GAGE2EQ4V326 116 aa4.31□□□□□ -1.72
TRIM53CP-201ENST00000531490 C6orf226Q5I0X4 101 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms