RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 SEC11CQ9BY50 192 aa10.54□□□□□ -0.72
SSSCA1-206ENST00000531405 A0A096LNJ9 63 aa10.53□□□□□ -0.72
SSSCA1-206ENST00000531405 KRTAP9-6A0A140TA67 174 aa10.52□□□□□ -0.73
SSSCA1-206ENST00000531405 S100PP25815 95 aa10.52□□□□□ -0.73
SSSCA1-206ENST00000531405 CTAG1AP78358 180 aa10.52□□□□□ -0.73
SSSCA1-206ENST00000531405 FABP9Q0Z7S8 132 aa10.52□□□□□ -0.73
SSSCA1-206ENST00000531405 COX17Q14061 63 aa10.52□□□□□ -0.73
SSSCA1-206ENST00000531405 PMCHL1Q16048 86 aa10.49□□□□□ -0.73
SSSCA1-206ENST00000531405 URB1-AS1Q96HZ7 61 aa10.49□□□□□ -0.73
SSSCA1-206ENST00000531405 SPRR4Q96PI1 79 aa10.49□□□□□ -0.73
SSSCA1-206ENST00000531405 C11orf86A6NJI1 115 aa10.48□□□□□ -0.73
SSSCA1-206ENST00000531405 COX19Q49B96 90 aa10.47□□□□□ -0.73
SSSCA1-206ENST00000531405 TMEM170BQ5T4T1 132 aa10.47□□□□□ -0.73
SSSCA1-206ENST00000531405 SPAG11AQ6PDA7 123 aa10.47□□□□□ -0.73
SSSCA1-206ENST00000531405 A0A0U1RRA0 63 aa10.46□□□□□ -0.73
SSSCA1-206ENST00000531405 LINC00158P58513 81 aa10.46□□□□□ -0.73
SSSCA1-206ENST00000531405 DAND5Q8N907 189 aa10.46□□□□□ -0.73
SSSCA1-206ENST00000531405 HBDP02042 147 aa10.45□□□□□ -0.74
SSSCA1-206ENST00000531405 BAGE3Q86Y29 109 aa10.44□□□□□ -0.74
SSSCA1-206ENST00000531405 SVBPQ8N300 66 aa10.44□□□□□ -0.74
SSSCA1-206ENST00000531405 Q8NBF4 154 aa10.44□□□□□ -0.74
SSSCA1-206ENST00000531405 C18orf32Q8TCD1 76 aa10.44□□□□□ -0.74
SSSCA1-206ENST00000531405 APOC3P02656 99 aa10.43□□□□□ -0.74
SSSCA1-206ENST00000531405 LINC00614P0C842 121 aa10.43□□□□□ -0.74
SSSCA1-206ENST00000531405 C4orf48Q5BLP8 95 aa10.43□□□□□ -0.74
SSSCA1-206ENST00000531405 SFTA2Q6UW10 78 aa10.43□□□□□ -0.74
SSSCA1-206ENST00000531405 FP248Q71RG6 208 aaPredicted RBP10.43□□□□□ -0.74
SSSCA1-206ENST00000531405 KRTAP13-3Q3SY46 172 aa10.42□□□□□ -0.74
SSSCA1-206ENST00000531405 LINC00337Q8N6G1 96 aa10.42□□□□□ -0.74
SSSCA1-206ENST00000531405 ZNF706Q9Y5V0 76 aaPredicted RBP10.42□□□□□ -0.74
SSSCA1-206ENST00000531405 SNAPINO95295 136 aa10.41□□□□□ -0.74
SSSCA1-206ENST00000531405 NCR3O14931 201 aa10.4□□□□□ -0.74
SSSCA1-206ENST00000531405 PRYO14603 147 aa10.39□□□□□ -0.75
SSSCA1-206ENST00000531405 SMIM13P0DJ93 91 aa10.39□□□□□ -0.75
SSSCA1-206ENST00000531405 RHEBQ15382 184 aa10.39□□□□□ -0.75
SSSCA1-206ENST00000531405 SMCR5Q8TEV8 140 aa10.39□□□□□ -0.75
SSSCA1-206ENST00000531405 RPS10P5Q9NQ39 176 aa10.39□□□□□ -0.75
SSSCA1-206ENST00000531405 CHTOPQ9Y3Y2 248 aaKnown RBP10.39□□□□□ -0.75
SSSCA1-206ENST00000531405 TRAPPC1Q9Y5R8 145 aa10.39□□□□□ -0.75
SSSCA1-206ENST00000531405 BOD1L2Q8IYS8 172 aa10.38□□□□□ -0.75
SSSCA1-206ENST00000531405 KRTAP4-1Q9BYQ7 146 aa10.38□□□□□ -0.75
SSSCA1-206ENST00000531405 TMEM223A0PJW6 202 aa10.37□□□□□ -0.75
SSSCA1-206ENST00000531405 ASB16-AS1Q495Z4 193 aa10.37□□□□□ -0.75
SSSCA1-206ENST00000531405 SPRR1AP35321 89 aa10.36□□□□□ -0.75
SSSCA1-206ENST00000531405 KRTAP4-16G5E9R7 235 aaPredicted RBP10.35□□□□□ -0.75
SSSCA1-206ENST00000531405 KCNQ1DNQ9H478 68 aa10.35□□□□□ -0.75
SSSCA1-206ENST00000531405 ETDCA0A1B0GVM5 59 aa10.34□□□□□ -0.75
SSSCA1-206ENST00000531405 SPINK1P00995 79 aa10.34□□□□□ -0.75
SSSCA1-206ENST00000531405 MEIG1Q5JSS6 88 aa10.34□□□□□ -0.75
SSSCA1-206ENST00000531405 MIR7-3HGQ8N6C7 128 aa10.34□□□□□ -0.75
SSSCA1-206ENST00000531405 TRBV10-3A0A0K0K1G6 114 aa10.33□□□□□ -0.76
SSSCA1-206ENST00000531405 LINC01547P58512 204 aaPredicted RBP10.32□□□□□ -0.76
SSSCA1-206ENST00000531405 LINC00483Q53H64 154 aa10.32□□□□□ -0.76
SSSCA1-206ENST00000531405 GAGE2AQ6NT46 116 aa10.32□□□□□ -0.76
SSSCA1-206ENST00000531405 IGLV9-49A0A0B4J1Y8 123 aa10.31□□□□□ -0.76
SSSCA1-206ENST00000531405 MOBPQ13875 183 aa10.31□□□□□ -0.76
SSSCA1-206ENST00000531405 TRAV12-1A0A0B4J245 112 aa10.29□□□□□ -0.76
SSSCA1-206ENST00000531405 ERC2-IT1O76042 136 aa10.29□□□□□ -0.76
SSSCA1-206ENST00000531405 SEC61BP60468 96 aaKnown RBP10.29□□□□□ -0.76
SSSCA1-206ENST00000531405 IFI27L1Q96BM0 104 aa10.29□□□□□ -0.76
SSSCA1-206ENST00000531405 B5MCH6 92 aa10.28□□□□□ -0.76
SSSCA1-206ENST00000531405 Q8N377 158 aa10.28□□□□□ -0.76
SSSCA1-206ENST00000531405 HERV-K104P63124 156 aa10.27□□□□□ -0.77
SSSCA1-206ENST00000531405 YPEL4Q96NS1 127 aa10.27□□□□□ -0.77
SSSCA1-206ENST00000531405 NDUFA12Q9UI09 145 aa10.27□□□□□ -0.77
SSSCA1-206ENST00000531405 Q9BRP9 147 aa10.25□□□□□ -0.77
SSSCA1-206ENST00000531405 FSIP2Q5CZC0 6907 aa10.24□□□□□ -0.77
SSSCA1-206ENST00000531405 MYMXA0A1B0GTQ4 84 aa10.23□□□□□ -0.77
SSSCA1-206ENST00000531405 DDTP30046 118 aa10.23□□□□□ -0.77
SSSCA1-206ENST00000531405 TSPEAR-AS2P59090 65 aa10.23□□□□□ -0.77
SSSCA1-206ENST00000531405 RPS29P62273 56 aaKnown RBP10.23□□□□□ -0.77
SSSCA1-206ENST00000531405 S100A12P80511 92 aa10.23□□□□□ -0.77
SSSCA1-206ENST00000531405 SSBP3-AS1Q7Z2R9 100 aa10.23□□□□□ -0.77
SSSCA1-206ENST00000531405 FAM19A2Q8N3H0 131 aa10.23□□□□□ -0.77
SSSCA1-206ENST00000531405 CHCHD1Q96BP2 118 aaKnown RBP10.23□□□□□ -0.77
SSSCA1-206ENST00000531405 LINC00587B1AMM8 73 aa10.22□□□□□ -0.77
SSSCA1-206ENST00000531405 LCE2DQ5TA82 110 aaPredicted RBP10.22□□□□□ -0.77
SSSCA1-206ENST00000531405 MAP1LC3CQ9BXW4 147 aa10.22□□□□□ -0.77
SSSCA1-206ENST00000531405 H0Y8G0 127 aa10.21□□□□□ -0.77
SSSCA1-206ENST00000531405 SLC25A20O43772 301 aa10.21□□□□□ -0.77
SSSCA1-206ENST00000531405 Q6ZRX8 168 aa10.21□□□□□ -0.77
SSSCA1-206ENST00000531405 COLCA2A8K830 154 aa10.2□□□□□ -0.78
SSSCA1-206ENST00000531405 XP32Q5T750 250 aa10.2□□□□□ -0.78
SSSCA1-206ENST00000531405 LOC107984156A0A0G2JMH3 177 aa10.18□□□□□ -0.78
SSSCA1-206ENST00000531405 TRBV10-2A0A0K0K1G8 114 aa10.18□□□□□ -0.78
SSSCA1-206ENST00000531405 C9orf153Q5TBE3 101 aa10.18□□□□□ -0.78
SSSCA1-206ENST00000531405 ARL17AQ8IVW1 177 aa10.18□□□□□ -0.78
SSSCA1-206ENST00000531405 LEPROTO15243 131 aa10.16□□□□□ -0.78
SSSCA1-206ENST00000531405 SPANXB1Q9NS25 103 aaPredicted RBP10.16□□□□□ -0.78
SSSCA1-206ENST00000531405 HSBP1O75506 76 aa10.15□□□□□ -0.78
SSSCA1-206ENST00000531405 LCE2CQ5TA81 110 aa10.15□□□□□ -0.78
SSSCA1-206ENST00000531405 IGLV6-57P01721 117 aa10.14□□□□□ -0.79
SSSCA1-206ENST00000531405 S100A7L2Q5SY68 101 aa10.14□□□□□ -0.79
SSSCA1-206ENST00000531405 ST20-AS1Q8NBB2 130 aa10.13□□□□□ -0.79
SSSCA1-206ENST00000531405 MIEN1Q9BRT3 115 aa10.13□□□□□ -0.79
SSSCA1-206ENST00000531405 TRAV23DV6A0A075B6W5 121 aa10.12□□□□□ -0.79
SSSCA1-206ENST00000531405 J3QQQ9 107 aa10.12□□□□□ -0.79
SSSCA1-206ENST00000531405 CRCT1Q9UGL9 99 aa10.12□□□□□ -0.79
SSSCA1-206ENST00000531405 NPC2P61916 151 aa10.11□□□□□ -0.79
SSSCA1-206ENST00000531405 EIF4EBP3O60516 100 aaPredicted RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 240 ms