RNA–Protein interactions for RNA: ENST00000531196.5

FGFR1-236, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 3

Gene FGFR1, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-236ENST00000531196 IGKV2D-26A0A0A0MRZ7 120 aa6.43□□□□□ -1.38
FGFR1-236ENST00000531196 A0A0U1RRA0 63 aa6.43□□□□□ -1.38
FGFR1-236ENST00000531196 TMEM238C9JI98 176 aa6.43□□□□□ -1.38
FGFR1-236ENST00000531196 ATP6V1G1O75348 118 aa6.43□□□□□ -1.38
FGFR1-236ENST00000531196 KRTAP13-1Q8IUC0 172 aa6.43□□□□□ -1.38
FGFR1-236ENST00000531196 FAM229BQ4G0N7 80 aa6.42□□□□□ -1.38
FGFR1-236ENST00000531196 MEIG1Q5JSS6 88 aa6.41□□□□□ -1.38
FGFR1-236ENST00000531196 LINC00304Q8N9R0 145 aa6.41□□□□□ -1.38
FGFR1-236ENST00000531196 IFI27L1Q96BM0 104 aa6.41□□□□□ -1.38
FGFR1-236ENST00000531196 CHCHD1Q96BP2 118 aaKnown RBP6.41□□□□□ -1.38
FGFR1-236ENST00000531196 TRAV12-1A0A0B4J245 112 aa6.4□□□□□ -1.38
FGFR1-236ENST00000531196 TMEM223A0PJW6 202 aa6.4□□□□□ -1.38
FGFR1-236ENST00000531196 M0R378 163 aa6.4□□□□□ -1.38
FGFR1-236ENST00000531196 KRTAP13-2Q52LG2 175 aa6.4□□□□□ -1.38
FGFR1-236ENST00000531196 YPEL4Q96NS1 127 aa6.4□□□□□ -1.38
FGFR1-236ENST00000531196 HIGD2AQ9BW72 106 aa6.4□□□□□ -1.38
FGFR1-236ENST00000531196 H0Y8G0 127 aa6.39□□□□□ -1.39
FGFR1-236ENST00000531196 HSBP1O75506 76 aa6.39□□□□□ -1.39
FGFR1-236ENST00000531196 Q8NDZ9 215 aa6.39□□□□□ -1.39
FGFR1-236ENST00000531196 SMIM13P0DJ93 91 aa6.38□□□□□ -1.39
FGFR1-236ENST00000531196 BOD1L2Q8IYS8 172 aa6.38□□□□□ -1.39
FGFR1-236ENST00000531196 RETNLBQ9BQ08 111 aa6.38□□□□□ -1.39
FGFR1-236ENST00000531196 NCR3O14931 201 aa6.36□□□□□ -1.39
FGFR1-236ENST00000531196 TRGC2P03986 189 aa6.36□□□□□ -1.39
FGFR1-236ENST00000531196 HERV-K104P63124 156 aa6.36□□□□□ -1.39
FGFR1-236ENST00000531196 S100A12P80511 92 aa6.36□□□□□ -1.39
FGFR1-236ENST00000531196 FAM19A2Q8N3H0 131 aa6.36□□□□□ -1.39
FGFR1-236ENST00000531196 MIR7-3HGQ8N6C7 128 aa6.36□□□□□ -1.39
FGFR1-236ENST00000531196 PLEKHB2Q96CS7 222 aa6.36□□□□□ -1.39
FGFR1-236ENST00000531196 MAP1LC3CQ9BXW4 147 aa6.36□□□□□ -1.39
FGFR1-236ENST00000531196 ZNF706Q9Y5V0 76 aaPredicted RBP6.36□□□□□ -1.39
FGFR1-236ENST00000531196 A0A0U1RQV1 116 aa6.35□□□□□ -1.39
FGFR1-236ENST00000531196 LINC00587B1AMM8 73 aa6.35□□□□□ -1.39
FGFR1-236ENST00000531196 PRYO14603 147 aa6.35□□□□□ -1.39
FGFR1-236ENST00000531196 NDUFA12Q9UI09 145 aa6.35□□□□□ -1.39
FGFR1-236ENST00000531196 MYMXA0A1B0GTQ4 84 aa6.34□□□□□ -1.39
FGFR1-236ENST00000531196 ETDCA0A1B0GVM5 59 aa6.34□□□□□ -1.39
FGFR1-236ENST00000531196 LEPROTL1O95214 131 aa6.34□□□□□ -1.39
FGFR1-236ENST00000531196 S100A1P23297 94 aa6.34□□□□□ -1.39
FGFR1-236ENST00000531196 C3orf22Q8N5N4 141 aa6.34□□□□□ -1.39
FGFR1-236ENST00000531196 COLCA2A8K830 154 aa6.33□□□□□ -1.4
FGFR1-236ENST00000531196 SPRR4Q96PI1 79 aa6.33□□□□□ -1.4
FGFR1-236ENST00000531196 PLNP26678 52 aa6.32□□□□□ -1.4
FGFR1-236ENST00000531196 HERVK_113P61574 105 aa6.32□□□□□ -1.4
FGFR1-236ENST00000531196 C4orf48Q5BLP8 95 aa6.32□□□□□ -1.4
FGFR1-236ENST00000531196 MIEN1Q9BRT3 115 aa6.32□□□□□ -1.4
FGFR1-236ENST00000531196 CDIP1Q9H305 208 aa6.32□□□□□ -1.4
FGFR1-236ENST00000531196 MUC2Q02817 5179 aa6.32□□□□□ -1.4
FGFR1-236ENST00000531196 IGLV7-46A0A075B6I9 117 aa6.31□□□□□ -1.4
FGFR1-236ENST00000531196 TRBV10-3A0A0K0K1G6 114 aa6.31□□□□□ -1.4
FGFR1-236ENST00000531196 SERF1AO75920 110 aa6.31□□□□□ -1.4
FGFR1-236ENST00000531196 LINC00337Q8N6G1 96 aa6.31□□□□□ -1.4
FGFR1-236ENST00000531196 HSPB8Q9UJY1 196 aa6.31□□□□□ -1.4
FGFR1-236ENST00000531196 LEPROTO15243 131 aa6.3□□□□□ -1.4
FGFR1-236ENST00000531196 FABP4P15090 132 aa6.3□□□□□ -1.4
FGFR1-236ENST00000531196 LGALS3P17931 250 aaKnown RBP6.3□□□□□ -1.4
FGFR1-236ENST00000531196 CTAG1AP78358 180 aa6.3□□□□□ -1.4
FGFR1-236ENST00000531196 SPAG11AQ6PDA7 123 aa6.3□□□□□ -1.4
FGFR1-236ENST00000531196 DAND5Q8N907 189 aa6.3□□□□□ -1.4
FGFR1-236ENST00000531196 PPDPFQ9H3Y8 114 aa6.3□□□□□ -1.4
FGFR1-236ENST00000531196 KCNQ1DNQ9H478 68 aa6.3□□□□□ -1.4
FGFR1-236ENST00000531196 DPM2O94777 84 aa6.29□□□□□ -1.4
FGFR1-236ENST00000531196 SPRR1AP35321 89 aa6.29□□□□□ -1.4
FGFR1-236ENST00000531196 TSPEAR-AS2P59090 65 aa6.29□□□□□ -1.4
FGFR1-236ENST00000531196 SMCR5Q8TEV8 140 aa6.29□□□□□ -1.4
FGFR1-236ENST00000531196 PMCHL2Q9BQD1 86 aa6.29□□□□□ -1.4
FGFR1-236ENST00000531196 J3QQQ9 107 aa6.28□□□□□ -1.4
FGFR1-236ENST00000531196 DDTP30046 118 aa6.28□□□□□ -1.4
FGFR1-236ENST00000531196 TPRXLQ17RH7 258 aa6.28□□□□□ -1.4
FGFR1-236ENST00000531196 Q8NBF4 154 aa6.28□□□□□ -1.4
FGFR1-236ENST00000531196 IGKCP01834 107 aa6.27□□□□□ -1.41
FGFR1-236ENST00000531196 NMUP48645 174 aa6.27□□□□□ -1.41
FGFR1-236ENST00000531196 LINC00310P59036 64 aa6.27□□□□□ -1.41
FGFR1-236ENST00000531196 S100A7L2Q5SY68 101 aa6.27□□□□□ -1.41
FGFR1-236ENST00000531196 GAGE2AQ6NT46 116 aa6.27□□□□□ -1.41
FGFR1-236ENST00000531196 SPANXB1Q9NS25 103 aaPredicted RBP6.27□□□□□ -1.41
FGFR1-236ENST00000531196 TRBV10-2A0A0K0K1G8 114 aa6.26□□□□□ -1.41
FGFR1-236ENST00000531196 IGLV9-49A0A0B4J1Y8 123 aa6.25□□□□□ -1.41
FGFR1-236ENST00000531196 KRTAP4-16G5E9R7 235 aaPredicted RBP6.25□□□□□ -1.41
FGFR1-236ENST00000531196 HIST1H2BKO60814 126 aa6.25□□□□□ -1.41
FGFR1-236ENST00000531196 HIST1H2BJP06899 126 aa6.25□□□□□ -1.41
FGFR1-236ENST00000531196 HIST1H2BOP23527 126 aa6.25□□□□□ -1.41
FGFR1-236ENST00000531196 HIST1H2BBP33778 126 aa6.25□□□□□ -1.41
FGFR1-236ENST00000531196 HIST1H2BDP58876 126 aa6.25□□□□□ -1.41
FGFR1-236ENST00000531196 HIST1H2BCP62807 126 aa6.25□□□□□ -1.41
FGFR1-236ENST00000531196 HIST2H2BEQ16778 126 aa6.25□□□□□ -1.41
FGFR1-236ENST00000531196 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.25□□□□□ -1.41
FGFR1-236ENST00000531196 HIST1H2BHQ93079 126 aa6.25□□□□□ -1.41
FGFR1-236ENST00000531196 HIST1H2BNQ99877 126 aa6.25□□□□□ -1.41
FGFR1-236ENST00000531196 HIST1H2BMQ99879 126 aa6.25□□□□□ -1.41
FGFR1-236ENST00000531196 B5MCH6 92 aa6.24□□□□□ -1.41
FGFR1-236ENST00000531196 NPC2P61916 151 aa6.24□□□□□ -1.41
FGFR1-236ENST00000531196 MOBPQ13875 183 aa6.24□□□□□ -1.41
FGFR1-236ENST00000531196 FP248Q71RG6 208 aaPredicted RBP6.24□□□□□ -1.41
FGFR1-236ENST00000531196 TRAV23DV6A0A075B6W5 121 aa6.23□□□□□ -1.41
FGFR1-236ENST00000531196 LOC107984156A0A0G2JMH3 177 aa6.23□□□□□ -1.41
FGFR1-236ENST00000531196 LINC00483Q53H64 154 aa6.23□□□□□ -1.41
FGFR1-236ENST00000531196 Q6ZRX8 168 aa6.23□□□□□ -1.41
FGFR1-236ENST00000531196 ARL17AQ8IVW1 177 aa6.23□□□□□ -1.41
FGFR1-236ENST00000531196 NDUFC2O95298 119 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms