RNA–Protein interactions for RNA: ENST00000530628.2

CDKN2A-210, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN2A, Length 748 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-210ENST00000530628 PLEKHB2Q96CS7 222 aa12.71□□□□□ -0.37
CDKN2A-210ENST00000530628 NDUFA5Q16718 116 aa12.7□□□□□ -0.38
CDKN2A-210ENST00000530628 CBLN2Q8IUK8 224 aa12.7□□□□□ -0.38
CDKN2A-210ENST00000530628 A0A096LNJ9 63 aa12.68□□□□□ -0.38
CDKN2A-210ENST00000530628 SFTA2Q6UW10 78 aa12.68□□□□□ -0.38
CDKN2A-210ENST00000530628 C3orf22Q8N5N4 141 aa12.67□□□□□ -0.38
CDKN2A-210ENST00000530628 YPEL4Q96NS1 127 aa12.67□□□□□ -0.38
CDKN2A-210ENST00000530628 HIGD2AQ9BW72 106 aa12.67□□□□□ -0.38
CDKN2A-210ENST00000530628 Q8NDZ9 215 aa12.66□□□□□ -0.38
CDKN2A-210ENST00000530628 HBDP02042 147 aa12.65□□□□□ -0.38
CDKN2A-210ENST00000530628 LINC00614P0C842 121 aa12.65□□□□□ -0.38
CDKN2A-210ENST00000530628 TMEM170BQ5T4T1 132 aa12.65□□□□□ -0.38
CDKN2A-210ENST00000530628 PPDPFQ9H3Y8 114 aa12.64□□□□□ -0.39
CDKN2A-210ENST00000530628 C11orf86A6NJI1 115 aa12.63□□□□□ -0.39
CDKN2A-210ENST00000530628 LINC00158P58513 81 aa12.63□□□□□ -0.39
CDKN2A-210ENST00000530628 SPAG11AQ6PDA7 123 aa12.63□□□□□ -0.39
CDKN2A-210ENST00000530628 BAGE3Q86Y29 109 aa12.63□□□□□ -0.39
CDKN2A-210ENST00000530628 URB1-AS1Q96HZ7 61 aa12.63□□□□□ -0.39
CDKN2A-210ENST00000530628 PMCHL1Q16048 86 aa12.62□□□□□ -0.39
CDKN2A-210ENST00000530628 C18orf32Q8TCD1 76 aa12.62□□□□□ -0.39
CDKN2A-210ENST00000530628 TRAPPC1Q9Y5R8 145 aa12.62□□□□□ -0.39
CDKN2A-210ENST00000530628 FAT4Q6V0I7 4981 aa12.61□□□□□ -0.39
CDKN2A-210ENST00000530628 SPRR4Q96PI1 79 aa12.6□□□□□ -0.39
CDKN2A-210ENST00000530628 C4orf48Q5BLP8 95 aa12.59□□□□□ -0.39
CDKN2A-210ENST00000530628 ZNF706Q9Y5V0 76 aaPredicted RBP12.59□□□□□ -0.39
CDKN2A-210ENST00000530628 A0A0U1RRA0 63 aa12.58□□□□□ -0.4
CDKN2A-210ENST00000530628 CHTOPQ9Y3Y2 248 aaKnown RBP12.57□□□□□ -0.4
CDKN2A-210ENST00000530628 ATP6V1G1O75348 118 aa12.56□□□□□ -0.4
CDKN2A-210ENST00000530628 FP248Q71RG6 208 aaPredicted RBP12.55□□□□□ -0.4
CDKN2A-210ENST00000530628 TMEM223A0PJW6 202 aa12.53□□□□□ -0.4
CDKN2A-210ENST00000530628 PRYO14603 147 aa12.53□□□□□ -0.4
CDKN2A-210ENST00000530628 LINC00337Q8N6G1 96 aa12.53□□□□□ -0.4
CDKN2A-210ENST00000530628 MUC17Q685J3 4493 aa12.52□□□□□ -0.4
CDKN2A-210ENST00000530628 SMIM13P0DJ93 91 aa12.51□□□□□ -0.41
CDKN2A-210ENST00000530628 BOD1L2Q8IYS8 172 aa12.51□□□□□ -0.41
CDKN2A-210ENST00000530628 DAND5Q8N907 189 aa12.51□□□□□ -0.41
CDKN2A-210ENST00000530628 Q8NBF4 154 aa12.51□□□□□ -0.41
CDKN2A-210ENST00000530628 NCR3O14931 201 aa12.5□□□□□ -0.41
CDKN2A-210ENST00000530628 MEIG1Q5JSS6 88 aa12.5□□□□□ -0.41
CDKN2A-210ENST00000530628 SMCR5Q8TEV8 140 aa12.5□□□□□ -0.41
CDKN2A-210ENST00000530628 KCNQ1DNQ9H478 68 aa12.49□□□□□ -0.41
CDKN2A-210ENST00000530628 ETDCA0A1B0GVM5 59 aa12.48□□□□□ -0.41
CDKN2A-210ENST00000530628 SPRR1AP35321 89 aa12.48□□□□□ -0.41
CDKN2A-210ENST00000530628 TRAV12-1A0A0B4J245 112 aa12.47□□□□□ -0.41
CDKN2A-210ENST00000530628 MIR7-3HGQ8N6C7 128 aa12.47□□□□□ -0.41
CDKN2A-210ENST00000530628 HERV-K104P63124 156 aa12.46□□□□□ -0.41
CDKN2A-210ENST00000530628 IFI27L1Q96BM0 104 aa12.46□□□□□ -0.41
CDKN2A-210ENST00000530628 LINC00587B1AMM8 73 aa12.45□□□□□ -0.42
CDKN2A-210ENST00000530628 SPINK1P00995 79 aa12.45□□□□□ -0.42
CDKN2A-210ENST00000530628 TRGC2P03986 189 aa12.45□□□□□ -0.42
CDKN2A-210ENST00000530628 KRTAP13-3Q3SY46 172 aa12.45□□□□□ -0.42
CDKN2A-210ENST00000530628 COLCA2A8K830 154 aa12.44□□□□□ -0.42
CDKN2A-210ENST00000530628 S100A12P80511 92 aa12.44□□□□□ -0.42
CDKN2A-210ENST00000530628 KRTAP4-16G5E9R7 235 aaPredicted RBP12.43□□□□□ -0.42
CDKN2A-210ENST00000530628 CHCHD1Q96BP2 118 aaKnown RBP12.43□□□□□ -0.42
CDKN2A-210ENST00000530628 TRBV10-3A0A0K0K1G6 114 aa12.42□□□□□ -0.42
CDKN2A-210ENST00000530628 KRTAP9-6A0A140TA67 174 aa12.41□□□□□ -0.42
CDKN2A-210ENST00000530628 ASB16-AS1Q495Z4 193 aa12.41□□□□□ -0.42
CDKN2A-210ENST00000530628 LINC00483Q53H64 154 aa12.41□□□□□ -0.42
CDKN2A-210ENST00000530628 GAGE2AQ6NT46 116 aa12.41□□□□□ -0.42
CDKN2A-210ENST00000530628 MAP1LC3CQ9BXW4 147 aa12.41□□□□□ -0.42
CDKN2A-210ENST00000530628 NDUFA12Q9UI09 145 aa12.4□□□□□ -0.42
CDKN2A-210ENST00000530628 MYMXA0A1B0GTQ4 84 aa12.39□□□□□ -0.43
CDKN2A-210ENST00000530628 IGLV9-49A0A0B4J1Y8 123 aa12.38□□□□□ -0.43
CDKN2A-210ENST00000530628 LINC00310P59036 64 aa12.38□□□□□ -0.43
CDKN2A-210ENST00000530628 B5MCH6 92 aa12.37□□□□□ -0.43
CDKN2A-210ENST00000530628 SEC61BP60468 96 aaKnown RBP12.36□□□□□ -0.43
CDKN2A-210ENST00000530628 MOBPQ13875 183 aa12.36□□□□□ -0.43
CDKN2A-210ENST00000530628 SSBP3-AS1Q7Z2R9 100 aa12.36□□□□□ -0.43
CDKN2A-210ENST00000530628 FAM19A2Q8N3H0 131 aa12.36□□□□□ -0.43
CDKN2A-210ENST00000530628 LINC01547P58512 204 aaPredicted RBP12.35□□□□□ -0.43
CDKN2A-210ENST00000530628 ERC2-IT1O76042 136 aa12.34□□□□□ -0.43
CDKN2A-210ENST00000530628 DDTP30046 118 aa12.34□□□□□ -0.43
CDKN2A-210ENST00000530628 RPS29P62273 56 aaKnown RBP12.34□□□□□ -0.43
CDKN2A-210ENST00000530628 LOC107984156A0A0G2JMH3 177 aa12.32□□□□□ -0.44
CDKN2A-210ENST00000530628 H0Y8G0 127 aa12.32□□□□□ -0.44
CDKN2A-210ENST00000530628 HSBP1O75506 76 aa12.32□□□□□ -0.44
CDKN2A-210ENST00000530628 SERF1AO75920 110 aa12.32□□□□□ -0.44
CDKN2A-210ENST00000530628 ARL17AQ8IVW1 177 aa12.32□□□□□ -0.44
CDKN2A-210ENST00000530628 Q8N377 158 aa12.32□□□□□ -0.44
CDKN2A-210ENST00000530628 TRBV10-2A0A0K0K1G8 114 aa12.31□□□□□ -0.44
CDKN2A-210ENST00000530628 LEPROTO15243 131 aa12.3□□□□□ -0.44
CDKN2A-210ENST00000530628 SLC25A20O43772 301 aa12.3□□□□□ -0.44
CDKN2A-210ENST00000530628 KRTAP4-1Q9BYQ7 146 aa12.3□□□□□ -0.44
CDKN2A-210ENST00000530628 Q6ZRX8 168 aa12.29□□□□□ -0.44
CDKN2A-210ENST00000530628 Q9BRP9 147 aa12.29□□□□□ -0.44
CDKN2A-210ENST00000530628 TSPEAR-AS2P59090 65 aa12.28□□□□□ -0.44
CDKN2A-210ENST00000530628 MIEN1Q9BRT3 115 aa12.28□□□□□ -0.44
CDKN2A-210ENST00000530628 S100A7L2Q5SY68 101 aa12.27□□□□□ -0.45
CDKN2A-210ENST00000530628 SPANXB1Q9NS25 103 aaPredicted RBP12.27□□□□□ -0.45
CDKN2A-210ENST00000530628 J3QQQ9 107 aa12.25□□□□□ -0.45
CDKN2A-210ENST00000530628 JOSD1Q15040 202 aaPredicted RBP12.25□□□□□ -0.45
CDKN2A-210ENST00000530628 LEPROTL1O95214 131 aa12.24□□□□□ -0.45
CDKN2A-210ENST00000530628 PLNP26678 52 aa12.24□□□□□ -0.45
CDKN2A-210ENST00000530628 C9orf153Q5TBE3 101 aa12.24□□□□□ -0.45
CDKN2A-210ENST00000530628 NDUFC2O95298 119 aa12.23□□□□□ -0.45
CDKN2A-210ENST00000530628 HERVK_113P61574 105 aa12.23□□□□□ -0.45
CDKN2A-210ENST00000530628 HIST1H2BKO60814 126 aa12.22□□□□□ -0.45
CDKN2A-210ENST00000530628 IGLV6-57P01721 117 aa12.22□□□□□ -0.45
CDKN2A-210ENST00000530628 HIST1H2BJP06899 126 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms