RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, human

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-223	ENST00000529986	LYPD5	Q6UWN5	251 aa		5.31	□□□□□ -1.56
CTNND1-223	ENST00000529986	TET2	Q6N021	2002 aa	Predicted RBP	5.31	□□□□□ -1.56
CTNND1-223	ENST00000529986		Q6ZQT0	140 aa		5.31	□□□□□ -1.56
CTNND1-223	ENST00000529986	C22orf24	Q9Y442	160 aa		5.31	□□□□□ -1.56
CTNND1-223	ENST00000529986		A0A1W2PPR1	153 aa		5.3	□□□□□ -1.56
CTNND1-223	ENST00000529986	C2orf48	Q96LS8	159 aa		5.29	□□□□□ -1.56
CTNND1-223	ENST00000529986	C7orf65	Q6ZTY9	151 aa		5.29	□□□□□ -1.56
CTNND1-223	ENST00000529986	C11orf72	Q8NBR9	251 aa		5.29	□□□□□ -1.56
CTNND1-223	ENST00000529986		A8MUN3	132 aa		5.29	□□□□□ -1.56
CTNND1-223	ENST00000529986	ATP11AUN	Q6ZP68	121 aa		5.28	□□□□□ -1.56
CTNND1-223	ENST00000529986	SETD2	Q9BYW2	2564 aa	Predicted RBP	5.28	□□□□□ -1.56
CTNND1-223	ENST00000529986	KRTAP10-9	P60411	292 aa		5.28	□□□□□ -1.56
CTNND1-223	ENST00000529986	RPL37A	P61513	92 aa	Known RBP	5.28	□□□□□ -1.56
CTNND1-223	ENST00000529986	LINC01561	Q8N1V8	128 aa		5.28	□□□□□ -1.56
CTNND1-223	ENST00000529986	TLN2	Q9Y4G6	2542 aa		5.27	□□□□□ -1.57
CTNND1-223	ENST00000529986	C6orf48	Q9UBA6	75 aa		5.27	□□□□□ -1.57
CTNND1-223	ENST00000529986	LINC00336	Q6ZUF6	198 aa		5.26	□□□□□ -1.57
CTNND1-223	ENST00000529986	LINC00167	Q96N53	147 aa		5.26	□□□□□ -1.57
CTNND1-223	ENST00000529986	IGLV5-45	A0A087WSX0	123 aa		5.26	□□□□□ -1.57
CTNND1-223	ENST00000529986	IGLV5-52	A0A0A0MRZ9	124 aa		5.26	□□□□□ -1.57
CTNND1-223	ENST00000529986	ACYP2	P14621	99 aa		5.26	□□□□□ -1.57
CTNND1-223	ENST00000529986	C8orf87	E5RJ46	101 aa		5.25	□□□□□ -1.57
CTNND1-223	ENST00000529986	ST20-AS1	Q8NBB2	130 aa		5.25	□□□□□ -1.57
CTNND1-223	ENST00000529986	JMJD1C	Q15652	2540 aa		5.25	□□□□□ -1.57
CTNND1-223	ENST00000529986	ELOF1	P60002	83 aa	Known RBP	5.25	□□□□□ -1.57
CTNND1-223	ENST00000529986	LITAF	Q99732	161 aa		5.25	□□□□□ -1.57
CTNND1-223	ENST00000529986	PTPRB	P23467	1997 aa		5.24	□□□□□ -1.57
CTNND1-223	ENST00000529986	LOC110117498	A0A087WWA1	95 aa		5.24	□□□□□ -1.57
CTNND1-223	ENST00000529986	CYP4F30P	Q9H0H9	118 aa		5.24	□□□□□ -1.57
CTNND1-223	ENST00000529986	LINC00476	Q8WZB0	136 aa		5.24	□□□□□ -1.57
CTNND1-223	ENST00000529986	SPINT4	Q6UDR6	99 aa		5.24	□□□□□ -1.57
CTNND1-223	ENST00000529986	CENPF	P49454	3210 aa		5.23	□□□□□ -1.57
CTNND1-223	ENST00000529986	PCSK5	Q92824	1860 aa		5.23	□□□□□ -1.57
CTNND1-223	ENST00000529986	MOBP	Q13875	183 aa		5.23	□□□□□ -1.57
CTNND1-223	ENST00000529986	ABCA12	Q86UK0	2595 aa		5.23	□□□□□ -1.57
CTNND1-223	ENST00000529986	TLN1	Q9Y490	2541 aa	Known RBP	5.23	□□□□□ -1.57
CTNND1-223	ENST00000529986	EIF4EBP3	O60516	100 aa	Predicted RBP	5.23	□□□□□ -1.57
CTNND1-223	ENST00000529986		Q8NBF4	154 aa		5.23	□□□□□ -1.57
CTNND1-223	ENST00000529986		A0A1B0GW54	56 aa		5.22	□□□□□ -1.57
CTNND1-223	ENST00000529986		H3BPC8	53 aa		5.22	□□□□□ -1.57
CTNND1-223	ENST00000529986	ERC2-IT1	O76042	136 aa		5.22	□□□□□ -1.57
CTNND1-223	ENST00000529986	CHD8	Q9HCK8	2581 aa		5.22	□□□□□ -1.57
CTNND1-223	ENST00000529986	TRAV22	A0A0B4J277	110 aa		5.22	□□□□□ -1.57
CTNND1-223	ENST00000529986	TP53AIP1	Q9HCN2	124 aa		5.22	□□□□□ -1.57
CTNND1-223	ENST00000529986	PKD1L2	Q7Z442	2459 aa		5.22	□□□□□ -1.57
CTNND1-223	ENST00000529986	USP9X	Q93008	2570 aa	Predicted RBP	5.21	□□□□□ -1.57
CTNND1-223	ENST00000529986	TRBV7-4	A0A0J9YYF1	115 aa		5.21	□□□□□ -1.57
CTNND1-223	ENST00000529986	SPACA4	Q8TDM5	124 aa		5.21	□□□□□ -1.57
CTNND1-223	ENST00000529986	C16orf95	Q9H693	158 aa		5.21	□□□□□ -1.57
CTNND1-223	ENST00000529986		K7EQZ3	153 aa		5.21	□□□□□ -1.58
CTNND1-223	ENST00000529986	MDFI	Q99750	246 aa		5.2	□□□□□ -1.58
CTNND1-223	ENST00000529986	COA5	Q86WW8	74 aa		5.2	□□□□□ -1.58
CTNND1-223	ENST00000529986		Q6ZRX8	168 aa		5.19	□□□□□ -1.58
CTNND1-223	ENST00000529986	PHF5A	Q7RTV0	110 aa	Known RBP	5.19	□□□□□ -1.58
CTNND1-223	ENST00000529986	SSBP3-AS1	Q7Z2R9	100 aa		5.19	□□□□□ -1.58
CTNND1-223	ENST00000529986	KTN1-AS1	Q86SY8	53 aa		5.18	□□□□□ -1.58
CTNND1-223	ENST00000529986	PLA2G1B	P04054	148 aa	Known RBP	5.18	□□□□□ -1.58
CTNND1-223	ENST00000529986	C1orf134	Q5TEV5	83 aa		5.18	□□□□□ -1.58
CTNND1-223	ENST00000529986	LCA10	Q71F78	164 aa		5.18	□□□□□ -1.58
CTNND1-223	ENST00000529986	CHTF8	P0CG12	524 aa		5.17	□□□□□ -1.58
CTNND1-223	ENST00000529986	LINC01600	Q96MT4	127 aa		5.17	□□□□□ -1.58
CTNND1-223	ENST00000529986	ZFYVE26	Q68DK2	2539 aa		5.17	□□□□□ -1.58
CTNND1-223	ENST00000529986	SPTBN4	Q9H254	2564 aa		5.17	□□□□□ -1.58
CTNND1-223	ENST00000529986		H7BZZ5	65 aa		5.16	□□□□□ -1.58
CTNND1-223	ENST00000529986	COL27A1	Q8IZC6	1860 aa	Predicted RBP	5.16	□□□□□ -1.58
CTNND1-223	ENST00000529986	EPM2A	B3EWF7	344 aa		5.16	□□□□□ -1.58
CTNND1-223	ENST00000529986	F8	P00451	2351 aa		5.15	□□□□□ -1.58
CTNND1-223	ENST00000529986	FAM168B	A1KXE4	195 aa		5.15	□□□□□ -1.58
CTNND1-223	ENST00000529986	CEP295	Q9C0D2	2601 aa		5.15	□□□□□ -1.58
CTNND1-223	ENST00000529986	KLKP1	Q107X0	134 aa		5.15	□□□□□ -1.59
CTNND1-223	ENST00000529986	C9orf129	Q5T035	196 aa	Known RBP	5.15	□□□□□ -1.59
CTNND1-223	ENST00000529986		Q6ZRP5	223 aa		5.14	□□□□□ -1.59
CTNND1-223	ENST00000529986	USP9Y	O00507	2555 aa	Predicted RBP	5.14	□□□□□ -1.59
CTNND1-223	ENST00000529986		A0A0G2JQZ4	141 aa		5.14	□□□□□ -1.59
CTNND1-223	ENST00000529986		A0A1W2PNN7	141 aa		5.14	□□□□□ -1.59
CTNND1-223	ENST00000529986	LINC00313	P59037	77 aa		5.14	□□□□□ -1.59
CTNND1-223	ENST00000529986	PRR15	Q8IV56	129 aa		5.14	□□□□□ -1.59
CTNND1-223	ENST00000529986	LOC101927531	A0A1B0GV80	90 aa		5.14	□□□□□ -1.59
CTNND1-223	ENST00000529986	IGLV6-57	P01721	117 aa		5.13	□□□□□ -1.59
CTNND1-223	ENST00000529986	LRRK2	Q5S007	2527 aa		5.13	□□□□□ -1.59
CTNND1-223	ENST00000529986		A8MWP4	228 aa		5.12	□□□□□ -1.59
CTNND1-223	ENST00000529986	PCNT	O95613	3336 aa		5.12	□□□□□ -1.59
CTNND1-223	ENST00000529986	KLK9	Q2XQG4	91 aa		5.11	□□□□□ -1.59
CTNND1-223	ENST00000529986	UQCR11	O14957	56 aa		5.11	□□□□□ -1.59
CTNND1-223	ENST00000529986	ANKRD11	Q6UB99	2663 aa	Predicted RBP	5.11	□□□□□ -1.59
CTNND1-223	ENST00000529986	FASN	P49327	2511 aa	Known RBP	5.11	□□□□□ -1.59
CTNND1-223	ENST00000529986	MIR22HG	Q0VDD5	57 aa		5.1	□□□□□ -1.59
CTNND1-223	ENST00000529986	MRPL34	Q9BQ48	92 aa	Known RBP	5.1	□□□□□ -1.59
CTNND1-223	ENST00000529986		Q96NJ1	140 aa		5.09	□□□□□ -1.59
CTNND1-223	ENST00000529986	FAM229A	H3BQW9	127 aa		5.08	□□□□□ -1.6
CTNND1-223	ENST00000529986	IGFL1	Q6UW32	110 aa		5.08	□□□□□ -1.6
CTNND1-223	ENST00000529986	LINC00528	Q8N1L1	170 aa		5.08	□□□□□ -1.6
CTNND1-223	ENST00000529986	WWC2-AS2	Q96NR7	200 aa		5.07	□□□□□ -1.6
CTNND1-223	ENST00000529986	C16orf90	A8MZG2	172 aa		5.07	□□□□□ -1.6
CTNND1-223	ENST00000529986	APLN	Q9ULZ1	77 aa		5.07	□□□□□ -1.6
CTNND1-223	ENST00000529986	GVQW2	A0A096LPI5	108 aa	Predicted RBP	5.07	□□□□□ -1.6
CTNND1-223	ENST00000529986	MTOR	P42345	2549 aa		5.07	□□□□□ -1.6
CTNND1-223	ENST00000529986		Q8N377	158 aa		5.06	□□□□□ -1.6
CTNND1-223	ENST00000529986	DSCR10	P59022	87 aa		5.06	□□□□□ -1.6
CTNND1-223	ENST00000529986	IGLV1-50	A0A075B6I6	118 aa		5.06	□□□□□ -1.6

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