RNA–Protein interactions for RNA: ENST00000529577.5

SF3B2-207, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-207ENST00000529577 CTAG1AP78358 180 aa11.59□□□□□ -0.55
SF3B2-207ENST00000529577 COX17Q14061 63 aa11.59□□□□□ -0.55
SF3B2-207ENST00000529577 C18orf32Q8TCD1 76 aa11.58□□□□□ -0.56
SF3B2-207ENST00000529577 RPL24P83731 157 aaKnown RBP11.57□□□□□ -0.56
SF3B2-207ENST00000529577 KRTAP13-3Q3SY46 172 aa11.57□□□□□ -0.56
SF3B2-207ENST00000529577 UQCC3Q6UW78 93 aa11.57□□□□□ -0.56
SF3B2-207ENST00000529577 DAND5Q8N907 189 aa11.57□□□□□ -0.56
SF3B2-207ENST00000529577 SMCO4Q9NRQ5 59 aa11.57□□□□□ -0.56
SF3B2-207ENST00000529577 SEC11CQ9BY50 192 aa11.56□□□□□ -0.56
SF3B2-207ENST00000529577 A0A0U1RRA0 63 aa11.54□□□□□ -0.56
SF3B2-207ENST00000529577 KRTAP4-16G5E9R7 235 aaPredicted RBP11.54□□□□□ -0.56
SF3B2-207ENST00000529577 LINC00614P0C842 121 aa11.54□□□□□ -0.56
SF3B2-207ENST00000529577 S100PP25815 95 aa11.54□□□□□ -0.56
SF3B2-207ENST00000529577 HBDP02042 147 aa11.53□□□□□ -0.56
SF3B2-207ENST00000529577 C10orf91Q5T1B1 145 aa11.53□□□□□ -0.56
SF3B2-207ENST00000529577 BAGE3Q86Y29 109 aa11.53□□□□□ -0.56
SF3B2-207ENST00000529577 SPRR1AP35321 89 aa11.52□□□□□ -0.57
SF3B2-207ENST00000529577 COX19Q49B96 90 aa11.51□□□□□ -0.57
SF3B2-207ENST00000529577 TMEM170BQ5T4T1 132 aa11.51□□□□□ -0.57
SF3B2-207ENST00000529577 Q8NBF4 154 aa11.51□□□□□ -0.57
SF3B2-207ENST00000529577 TMEM223A0PJW6 202 aa11.5□□□□□ -0.57
SF3B2-207ENST00000529577 LINC00158P58513 81 aa11.5□□□□□ -0.57
SF3B2-207ENST00000529577 SPAG11AQ6PDA7 123 aa11.5□□□□□ -0.57
SF3B2-207ENST00000529577 SMCR5Q8TEV8 140 aa11.5□□□□□ -0.57
SF3B2-207ENST00000529577 ASB16-AS1Q495Z4 193 aa11.49□□□□□ -0.57
SF3B2-207ENST00000529577 FP248Q71RG6 208 aaPredicted RBP11.49□□□□□ -0.57
SF3B2-207ENST00000529577 SMIM13P0DJ93 91 aa11.48□□□□□ -0.57
SF3B2-207ENST00000529577 NCR3O14931 201 aa11.46□□□□□ -0.57
SF3B2-207ENST00000529577 KCNQ1DNQ9H478 68 aa11.46□□□□□ -0.57
SF3B2-207ENST00000529577 RPS10P5Q9NQ39 176 aa11.46□□□□□ -0.57
SF3B2-207ENST00000529577 CHTOPQ9Y3Y2 248 aaKnown RBP11.46□□□□□ -0.57
SF3B2-207ENST00000529577 TRAPPC1Q9Y5R8 145 aa11.46□□□□□ -0.57
SF3B2-207ENST00000529577 PRYO14603 147 aa11.45□□□□□ -0.58
SF3B2-207ENST00000529577 ERC2-IT1O76042 136 aa11.45□□□□□ -0.58
SF3B2-207ENST00000529577 LINC00483Q53H64 154 aa11.45□□□□□ -0.58
SF3B2-207ENST00000529577 LINC00337Q8N6G1 96 aa11.45□□□□□ -0.58
SF3B2-207ENST00000529577 COMMD7Q86VX2 200 aa11.44□□□□□ -0.58
SF3B2-207ENST00000529577 BOD1L2Q8IYS8 172 aa11.43□□□□□ -0.58
SF3B2-207ENST00000529577 MIR7-3HGQ8N6C7 128 aa11.43□□□□□ -0.58
SF3B2-207ENST00000529577 TRBV10-3A0A0K0K1G6 114 aa11.42□□□□□ -0.58
SF3B2-207ENST00000529577 RHEBQ15382 184 aa11.42□□□□□ -0.58
SF3B2-207ENST00000529577 SFTA2Q6UW10 78 aa11.42□□□□□ -0.58
SF3B2-207ENST00000529577 LCE2CQ5TA81 110 aa11.4□□□□□ -0.58
SF3B2-207ENST00000529577 ZNF706Q9Y5V0 76 aaPredicted RBP11.4□□□□□ -0.58
SF3B2-207ENST00000529577 TRAV12-1A0A0B4J245 112 aa11.39□□□□□ -0.59
SF3B2-207ENST00000529577 B5MCH6 92 aa11.39□□□□□ -0.59
SF3B2-207ENST00000529577 TSPEAR-AS2P59090 65 aa11.39□□□□□ -0.59
SF3B2-207ENST00000529577 LCE2DQ5TA82 110 aaPredicted RBP11.39□□□□□ -0.59
SF3B2-207ENST00000529577 Q8N377 158 aa11.39□□□□□ -0.59
SF3B2-207ENST00000529577 FSIP2Q5CZC0 6907 aa11.39□□□□□ -0.59
SF3B2-207ENST00000529577 SPINK1P00995 79 aa11.38□□□□□ -0.59
SF3B2-207ENST00000529577 C4orf48Q5BLP8 95 aa11.38□□□□□ -0.59
SF3B2-207ENST00000529577 YPEL4Q96NS1 127 aa11.38□□□□□ -0.59
SF3B2-207ENST00000529577 Q9BRP9 147 aa11.38□□□□□ -0.59
SF3B2-207ENST00000529577 KRTAP19-2Q3LHN2 52 aa11.36□□□□□ -0.59
SF3B2-207ENST00000529577 GAGE2AQ6NT46 116 aa11.36□□□□□ -0.59
SF3B2-207ENST00000529577 IFI27L1Q96BM0 104 aa11.36□□□□□ -0.59
SF3B2-207ENST00000529577 MOBPQ13875 183 aa11.35□□□□□ -0.59
SF3B2-207ENST00000529577 ETDCA0A1B0GVM5 59 aa11.34□□□□□ -0.59
SF3B2-207ENST00000529577 MEIG1Q5JSS6 88 aa11.34□□□□□ -0.59
SF3B2-207ENST00000529577 IGLV9-49A0A0B4J1Y8 123 aa11.33□□□□□ -0.6
SF3B2-207ENST00000529577 LOC107984156A0A0G2JMH3 177 aa11.32□□□□□ -0.6
SF3B2-207ENST00000529577 XP32Q5T750 250 aa11.32□□□□□ -0.6
SF3B2-207ENST00000529577 ARL17AQ8IVW1 177 aa11.32□□□□□ -0.6
SF3B2-207ENST00000529577 NDUFA12Q9UI09 145 aa11.32□□□□□ -0.6
SF3B2-207ENST00000529577 LINC01547P58512 204 aaPredicted RBP11.31□□□□□ -0.6
SF3B2-207ENST00000529577 EIF4EBP3O60516 100 aaPredicted RBP11.3□□□□□ -0.6
SF3B2-207ENST00000529577 HERV-K104P63124 156 aa11.3□□□□□ -0.6
SF3B2-207ENST00000529577 FAM19A2Q8N3H0 131 aa11.3□□□□□ -0.6
SF3B2-207ENST00000529577 SEC61BP60468 96 aaKnown RBP11.29□□□□□ -0.6
SF3B2-207ENST00000529577 RPS29P62273 56 aaKnown RBP11.29□□□□□ -0.6
SF3B2-207ENST00000529577 CHCHD1Q96BP2 118 aaKnown RBP11.29□□□□□ -0.6
SF3B2-207ENST00000529577 ATP6V1G1O75348 118 aa11.28□□□□□ -0.6
SF3B2-207ENST00000529577 LINC00310P59036 64 aa11.28□□□□□ -0.6
SF3B2-207ENST00000529577 SSBP3-AS1Q7Z2R9 100 aa11.28□□□□□ -0.6
SF3B2-207ENST00000529577 DDTP30046 118 aa11.26□□□□□ -0.61
SF3B2-207ENST00000529577 Q6ZRX8 168 aa11.26□□□□□ -0.61
SF3B2-207ENST00000529577 APOC3P02656 99 aa11.25□□□□□ -0.61
SF3B2-207ENST00000529577 SOSTDC1Q6X4U4 206 aa11.25□□□□□ -0.61
SF3B2-207ENST00000529577 ST20-AS1Q8NBB2 130 aa11.25□□□□□ -0.61
SF3B2-207ENST00000529577 MYMXA0A1B0GTQ4 84 aa11.24□□□□□ -0.61
SF3B2-207ENST00000529577 IGLV6-57P01721 117 aa11.24□□□□□ -0.61
SF3B2-207ENST00000529577 TRBV10-2A0A0K0K1G8 114 aa11.23□□□□□ -0.61
SF3B2-207ENST00000529577 LEPROTO15243 131 aa11.22□□□□□ -0.61
SF3B2-207ENST00000529577 SLC25A20O43772 301 aa11.22□□□□□ -0.61
SF3B2-207ENST00000529577 NDUFA5Q16718 116 aa11.22□□□□□ -0.61
SF3B2-207ENST00000529577 CRCT1Q9UGL9 99 aa11.22□□□□□ -0.61
SF3B2-207ENST00000529577 H0Y8G0 127 aa11.21□□□□□ -0.61
SF3B2-207ENST00000529577 LINC00587B1AMM8 73 aa11.19□□□□□ -0.62
SF3B2-207ENST00000529577 MT1HP80294 61 aa11.19□□□□□ -0.62
SF3B2-207ENST00000529577 ADAMTSL4-AS1Q5T5F5 129 aa11.19□□□□□ -0.62
SF3B2-207ENST00000529577 PMCHL2Q9BQD1 86 aa11.19□□□□□ -0.62
SF3B2-207ENST00000529577 MAP1LC3CQ9BXW4 147 aa11.18□□□□□ -0.62
SF3B2-207ENST00000529577 SPANXB1Q9NS25 103 aaPredicted RBP11.18□□□□□ -0.62
SF3B2-207ENST00000529577 J3QQQ9 107 aa11.17□□□□□ -0.62
SF3B2-207ENST00000529577 HSBP1O75506 76 aa11.16□□□□□ -0.62
SF3B2-207ENST00000529577 SNAPINO95295 136 aa11.16□□□□□ -0.62
SF3B2-207ENST00000529577 TRAV23DV6A0A075B6W5 121 aa11.15□□□□□ -0.62
SF3B2-207ENST00000529577 NDUFC2O95298 119 aa11.15□□□□□ -0.62
SF3B2-207ENST00000529577 NPC2P61916 151 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms