RNA–Protein interactions for RNA: ENST00000529063.1

NUP98-215, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-215ENST00000529063 F8VRH5 84 aa3.42□□□□□ -1.86
NUP98-215ENST00000529063 SCO1O75880 301 aa3.42□□□□□ -1.86
NUP98-215ENST00000529063 PPBPP02775 128 aa3.42□□□□□ -1.86
NUP98-215ENST00000529063 CKS1BP61024 79 aa3.42□□□□□ -1.86
NUP98-215ENST00000529063 C2orf66Q6UXQ4 117 aa3.42□□□□□ -1.86
NUP98-215ENST00000529063 Q6ZN92 141 aa3.42□□□□□ -1.86
NUP98-215ENST00000529063 ORMDL3Q8N138 153 aa3.42□□□□□ -1.86
NUP98-215ENST00000529063 C3orf22Q8N5N4 141 aa3.42□□□□□ -1.86
NUP98-215ENST00000529063 PRELID3AQ96N28 172 aa3.42□□□□□ -1.86
NUP98-215ENST00000529063 CDKN2A-AS1Q9UH64 79 aa3.42□□□□□ -1.86
NUP98-215ENST00000529063 IGIPA6NJ69 53 aa3.41□□□□□ -1.86
NUP98-215ENST00000529063 E9PLD3 99 aa3.41□□□□□ -1.86
NUP98-215ENST00000529063 F8W036 122 aa3.41□□□□□ -1.86
NUP98-215ENST00000529063 LCE1DQ5T752 114 aa3.41□□□□□ -1.86
NUP98-215ENST00000529063 TMEM136Q6ZRR5 245 aa3.41□□□□□ -1.86
NUP98-215ENST00000529063 C2orf88Q9BSF0 95 aa3.41□□□□□ -1.86
NUP98-215ENST00000529063 NAT8Q9UHE5 227 aa3.41□□□□□ -1.86
NUP98-215ENST00000529063 CYSLTR1Q9Y271 337 aa3.41□□□□□ -1.86
NUP98-215ENST00000529063 LOC389332A0A1B0GUA5 103 aa3.4□□□□□ -1.87
NUP98-215ENST00000529063 RAB5AP20339 215 aa3.4□□□□□ -1.87
NUP98-215ENST00000529063 UBE2AP49459 152 aa3.4□□□□□ -1.87
NUP98-215ENST00000529063 PRLHP81277 87 aa3.4□□□□□ -1.87
NUP98-215ENST00000529063 KRTAP13-3Q3SY46 172 aa3.4□□□□□ -1.87
NUP98-215ENST00000529063 IGKV2-28A0A075B6P5 120 aa3.39□□□□□ -1.87
NUP98-215ENST00000529063 IGKV2D-28P01615 120 aa3.39□□□□□ -1.87
NUP98-215ENST00000529063 S100A8P05109 93 aa3.39□□□□□ -1.87
NUP98-215ENST00000529063 CXCL5P42830 114 aa3.39□□□□□ -1.87
NUP98-215ENST00000529063 HERVK_113P63121 156 aa3.39□□□□□ -1.87
NUP98-215ENST00000529063 CTAG1AP78358 180 aa3.39□□□□□ -1.87
NUP98-215ENST00000529063 ASB16-AS1Q495Z4 193 aa3.39□□□□□ -1.87
NUP98-215ENST00000529063 ATP5L2Q7Z4Y8 100 aa3.39□□□□□ -1.87
NUP98-215ENST00000529063 Q8N8P6 123 aa3.39□□□□□ -1.87
NUP98-215ENST00000529063 Q8NDZ9 215 aa3.39□□□□□ -1.87
NUP98-215ENST00000529063 MAP1LC3AQ9H492 121 aa3.39□□□□□ -1.87
NUP98-215ENST00000529063 IGKV2D-26A0A0A0MRZ7 120 aa3.38□□□□□ -1.87
NUP98-215ENST00000529063 TMEM238C9JI98 176 aa3.38□□□□□ -1.87
NUP98-215ENST00000529063 KRTAP19-2Q3LHN2 52 aa3.38□□□□□ -1.87
NUP98-215ENST00000529063 COX7B2Q8TF08 81 aa3.38□□□□□ -1.87
NUP98-215ENST00000529063 PLEKHB2Q96CS7 222 aa3.38□□□□□ -1.87
NUP98-215ENST00000529063 TMEM126AQ9H061 195 aa3.38□□□□□ -1.87
NUP98-215ENST00000529063 GEMIN7Q9H840 131 aaKnown RBP3.38□□□□□ -1.87
NUP98-215ENST00000529063 LAMTOR2Q9Y2Q5 125 aa3.38□□□□□ -1.87
NUP98-215ENST00000529063 CHTOPQ9Y3Y2 248 aaKnown RBP3.38□□□□□ -1.87
NUP98-215ENST00000529063 M0R378 163 aa3.37□□□□□ -1.87
NUP98-215ENST00000529063 RAB5BP61020 215 aa3.37□□□□□ -1.87
NUP98-215ENST00000529063 ORMDL2Q53FV1 153 aa3.37□□□□□ -1.87
NUP98-215ENST00000529063 PDZD11Q5EBL8 140 aa3.37□□□□□ -1.87
NUP98-215ENST00000529063 FAM19A1Q7Z5A9 133 aa3.37□□□□□ -1.87
NUP98-215ENST00000529063 AKAP14Q86UN6 197 aa3.37□□□□□ -1.87
NUP98-215ENST00000529063 NKAPP1Q8N9T2 125 aa3.37□□□□□ -1.87
NUP98-215ENST00000529063 TIMM17AQ99595 171 aa3.37□□□□□ -1.87
NUP98-215ENST00000529063 FLGP20930 4061 aaPredicted RBP3.36□□□□□ -1.87
NUP98-215ENST00000529063 KRTAP4-8A0A0G2JLE6 195 aa3.36□□□□□ -1.87
NUP98-215ENST00000529063 TINCRA0A1B0GVN0 87 aa3.36□□□□□ -1.87
NUP98-215ENST00000529063 SPINK8P0C7L1 97 aa3.36□□□□□ -1.87
NUP98-215ENST00000529063 ADCYAP1P18509 176 aa3.36□□□□□ -1.87
NUP98-215ENST00000529063 SEC11AP67812 179 aa3.36□□□□□ -1.87
NUP98-215ENST00000529063 FP248Q71RG6 208 aaPredicted RBP3.36□□□□□ -1.87
NUP98-215ENST00000529063 TOMM6Q96B49 74 aa3.36□□□□□ -1.87
NUP98-215ENST00000529063 DHRS4-AS1Q9P1J3 65 aa3.36□□□□□ -1.87
NUP98-215ENST00000529063 A0A1B0GWB2 263 aa3.35□□□□□ -1.87
NUP98-215ENST00000529063 NDUFAF8A1L188 74 aa3.35□□□□□ -1.87
NUP98-215ENST00000529063 K7EMI3 77 aa3.35□□□□□ -1.87
NUP98-215ENST00000529063 Q8N377 158 aa3.35□□□□□ -1.87
NUP98-215ENST00000529063 SPRR4Q96PI1 79 aa3.35□□□□□ -1.87
NUP98-215ENST00000529063 PFN2P35080 140 aa3.34□□□□□ -1.87
NUP98-215ENST00000529063 PEA15Q15121 130 aa3.34□□□□□ -1.87
NUP98-215ENST00000529063 SPAG11AQ6PDA7 123 aa3.34□□□□□ -1.87
NUP98-215ENST00000529063 CBLN2Q8IUK8 224 aa3.34□□□□□ -1.87
NUP98-215ENST00000529063 DAND5Q8N907 189 aa3.34□□□□□ -1.87
NUP98-215ENST00000529063 SND1-IT1Q9HBX3 110 aa3.34□□□□□ -1.87
NUP98-215ENST00000529063 NXT2Q9NPJ8 142 aaKnown RBP3.34□□□□□ -1.87
NUP98-215ENST00000529063 MT1HP80294 61 aa3.33□□□□□ -1.88
NUP98-215ENST00000529063 LINC00337Q8N6G1 96 aa3.33□□□□□ -1.88
NUP98-215ENST00000529063 HIGD2AQ9BW72 106 aa3.33□□□□□ -1.88
NUP98-215ENST00000529063 CST9LQ9H4G1 147 aa3.33□□□□□ -1.88
NUP98-215ENST00000529063 LINC01546A6NGU7 62 aa3.32□□□□□ -1.88
NUP98-215ENST00000529063 SCGB3A1Q96QR1 104 aa3.32□□□□□ -1.88
NUP98-215ENST00000529063 GNB1LQ9BYB4 327 aa3.32□□□□□ -1.88
NUP98-215ENST00000529063 ERG28Q9UKR5 140 aa3.32□□□□□ -1.88
NUP98-215ENST00000529063 IGLC3P0DOY3 106 aa3.31□□□□□ -1.88
NUP98-215ENST00000529063 ZNF22P17026 224 aaPredicted RBP3.31□□□□□ -1.88
NUP98-215ENST00000529063 RAB14P61106 215 aa3.31□□□□□ -1.88
NUP98-215ENST00000529063 A0A096LNJ9 63 aa3.3□□□□□ -1.88
NUP98-215ENST00000529063 KRTAP4-16G5E9R7 235 aaPredicted RBP3.3□□□□□ -1.88
NUP98-215ENST00000529063 SPINK1P00995 79 aa3.3□□□□□ -1.88
NUP98-215ENST00000529063 G0S2P27469 103 aa3.3□□□□□ -1.88
NUP98-215ENST00000529063 SPRR1AP35321 89 aa3.3□□□□□ -1.88
NUP98-215ENST00000529063 PMVKQ15126 192 aa3.3□□□□□ -1.88
NUP98-215ENST00000529063 LINC00483Q53H64 154 aa3.3□□□□□ -1.88
NUP98-215ENST00000529063 SMCR5Q8TEV8 140 aa3.3□□□□□ -1.88
NUP98-215ENST00000529063 ZNF625Q96I27 306 aaPredicted RBP3.3□□□□□ -1.88
NUP98-215ENST00000529063 A0A1B0GVG6 124 aa3.29□□□□□ -1.88
NUP98-215ENST00000529063 H3BRM9 83 aa3.29□□□□□ -1.88
NUP98-215ENST00000529063 MT-ND4LP03901 98 aa3.29□□□□□ -1.88
NUP98-215ENST00000529063 KRTAP10-6P60371 365 aaPredicted RBP3.29□□□□□ -1.88
NUP98-215ENST00000529063 CXCL6P80162 114 aa3.29□□□□□ -1.88
NUP98-215ENST00000529063 COX17Q14061 63 aa3.29□□□□□ -1.88
NUP98-215ENST00000529063 ZNF706Q9Y5V0 76 aaPredicted RBP3.29□□□□□ -1.88
NUP98-215ENST00000529063 USH2AO75445 5202 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms