RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 PDZD2O15018 2839 aa5.61□□□□□ -1.51
CSTF3-208ENST00000528865 NBPF19A0A087WUL8 3843 aa5.61□□□□□ -1.51
CSTF3-208ENST00000528865 TRBV7-6A0A0J9YX20 115 aa5.61□□□□□ -1.51
CSTF3-208ENST00000528865 INAFM1C9JVW0 142 aa5.61□□□□□ -1.51
CSTF3-208ENST00000528865 ACANP16112 2415 aa5.61□□□□□ -1.51
CSTF3-208ENST00000528865 PDE6GP18545 87 aa5.61□□□□□ -1.51
CSTF3-208ENST00000528865 SERP2Q8N6R1 65 aa5.61□□□□□ -1.51
CSTF3-208ENST00000528865 MAP1AP78559 2803 aaPredicted RBP5.61□□□□□ -1.51
CSTF3-208ENST00000528865 FLNAP21333 2647 aaKnown RBP5.61□□□□□ -1.51
CSTF3-208ENST00000528865 FN1P02751 2386 aaKnown RBP5.6□□□□□ -1.51
CSTF3-208ENST00000528865 RBM3P98179 157 aaKnown RBP5.6□□□□□ -1.51
CSTF3-208ENST00000528865 Q6ZQT0 140 aa5.6□□□□□ -1.51
CSTF3-208ENST00000528865 UPK3BQ9BT76 320 aa5.6□□□□□ -1.51
CSTF3-208ENST00000528865 HIVEP2P31629 2446 aa5.59□□□□□ -1.51
CSTF3-208ENST00000528865 USP17L23D6RBM5 183 aa5.59□□□□□ -1.51
CSTF3-208ENST00000528865 F8WDY8 70 aa5.59□□□□□ -1.51
CSTF3-208ENST00000528865 BCE1O60756 84 aa5.59□□□□□ -1.51
CSTF3-208ENST00000528865 HTN3P15516 51 aa5.59□□□□□ -1.51
CSTF3-208ENST00000528865 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.59□□□□□ -1.51
CSTF3-208ENST00000528865 TRAV23DV6A0A075B6W5 121 aa5.58□□□□□ -1.52
CSTF3-208ENST00000528865 GHRHP01286 108 aa5.58□□□□□ -1.52
CSTF3-208ENST00000528865 VPREB1P12018 145 aa5.58□□□□□ -1.52
CSTF3-208ENST00000528865 EGFEM1PQ0D2K5 195 aa5.58□□□□□ -1.52
CSTF3-208ENST00000528865 SMIM20Q8N5G0 67 aa5.58□□□□□ -1.52
CSTF3-208ENST00000528865 UBL5Q9BZL1 73 aa5.58□□□□□ -1.52
CSTF3-208ENST00000528865 SETXQ7Z333 2677 aaKnown RBP5.57□□□□□ -1.52
CSTF3-208ENST00000528865 A0A087WVE0 104 aa5.57□□□□□ -1.52
CSTF3-208ENST00000528865 COX7BP24311 80 aa5.57□□□□□ -1.52
CSTF3-208ENST00000528865 RPS28P62857 69 aaKnown RBP5.57□□□□□ -1.52
CSTF3-208ENST00000528865 C3orf56Q8N813 242 aa5.57□□□□□ -1.52
CSTF3-208ENST00000528865 DIRC1Q969H9 104 aa5.57□□□□□ -1.52
CSTF3-208ENST00000528865 M0R378 163 aa5.56□□□□□ -1.52
CSTF3-208ENST00000528865 ZNF73O43830 326 aaPredicted RBP5.56□□□□□ -1.52
CSTF3-208ENST00000528865 ELOF1P60002 83 aaKnown RBP5.56□□□□□ -1.52
CSTF3-208ENST00000528865 KPRPQ5T749 579 aaPredicted RBP5.56□□□□□ -1.52
CSTF3-208ENST00000528865 TRBV7-4A0A0J9YYF1 115 aa5.55□□□□□ -1.52
CSTF3-208ENST00000528865 Q6ZQY7 126 aa5.55□□□□□ -1.52
CSTF3-208ENST00000528865 FAM19A1Q7Z5A9 133 aa5.55□□□□□ -1.52
CSTF3-208ENST00000528865 WFDC10BQ8IUB3 73 aa5.55□□□□□ -1.52
CSTF3-208ENST00000528865 CAMK2N2Q96S95 79 aa5.55□□□□□ -1.52
CSTF3-208ENST00000528865 DSCR8Q96T75 97 aa5.55□□□□□ -1.52
CSTF3-208ENST00000528865 XAGE1AQ9HD64 81 aa5.55□□□□□ -1.52
CSTF3-208ENST00000528865 LAMTOR3Q9UHA4 124 aa5.55□□□□□ -1.52
CSTF3-208ENST00000528865 MTORP42345 2549 aa5.55□□□□□ -1.52
CSTF3-208ENST00000528865 CUBNO60494 3623 aa5.54□□□□□ -1.52
CSTF3-208ENST00000528865 NDUFC2-KCTD14E9PQ53 114 aa5.54□□□□□ -1.52
CSTF3-208ENST00000528865 M0R2N4 97 aa5.54□□□□□ -1.52
CSTF3-208ENST00000528865 ESRGQ1W209 222 aa5.54□□□□□ -1.52
CSTF3-208ENST00000528865 C15orf56Q8N910 161 aa5.54□□□□□ -1.52
CSTF3-208ENST00000528865 CENPEQ02224 2701 aa5.53□□□□□ -1.52
CSTF3-208ENST00000528865 KRTAP10-11P60412 298 aa5.53□□□□□ -1.52
CSTF3-208ENST00000528865 TMEM258P61165 79 aa5.53□□□□□ -1.52
CSTF3-208ENST00000528865 CXCL6P80162 114 aa5.53□□□□□ -1.52
CSTF3-208ENST00000528865 LINC01556Q5JQF7 62 aa5.53□□□□□ -1.52
CSTF3-208ENST00000528865 Q6ZRU5 148 aa5.53□□□□□ -1.52
CSTF3-208ENST00000528865 Q6ZVQ6 151 aa5.53□□□□□ -1.52
CSTF3-208ENST00000528865 LINC00528Q8N1L1 170 aa5.53□□□□□ -1.52
CSTF3-208ENST00000528865 LINC01547P58512 204 aaPredicted RBP5.52□□□□□ -1.53
CSTF3-208ENST00000528865 HIGD2BQ4VC39 106 aa5.52□□□□□ -1.53
CSTF3-208ENST00000528865 CYSTM1Q9H1C7 97 aa5.52□□□□□ -1.53
CSTF3-208ENST00000528865 SETD2Q9BYW2 2564 aaPredicted RBP5.52□□□□□ -1.53
CSTF3-208ENST00000528865 LOC107984640A0A0U1RRK4 108 aa5.51□□□□□ -1.53
CSTF3-208ENST00000528865 Q6ZTC4 211 aa5.51□□□□□ -1.53
CSTF3-208ENST00000528865 PLA2G2DQ9UNK4 145 aa5.51□□□□□ -1.53
CSTF3-208ENST00000528865 TRAV7A0A075B6U4 112 aa5.5□□□□□ -1.53
CSTF3-208ENST00000528865 J3KT08 172 aa5.5□□□□□ -1.53
CSTF3-208ENST00000528865 TLX1NBP0CAT3 122 aa5.5□□□□□ -1.53
CSTF3-208ENST00000528865 C1orf43Q9BWL3 253 aa5.5□□□□□ -1.53
CSTF3-208ENST00000528865 KCNQ1DNQ9H478 68 aa5.5□□□□□ -1.53
CSTF3-208ENST00000528865 RETNQ9HD89 108 aa5.5□□□□□ -1.53
CSTF3-208ENST00000528865 NF1P21359 2839 aa5.49□□□□□ -1.53
CSTF3-208ENST00000528865 DNAH10OSP0CZ25 163 aa5.49□□□□□ -1.53
CSTF3-208ENST00000528865 SYCNQ0VAF6 134 aa5.49□□□□□ -1.53
CSTF3-208ENST00000528865 Q6ZRP5 223 aa5.49□□□□□ -1.53
CSTF3-208ENST00000528865 DPH3Q96FX2 82 aa5.49□□□□□ -1.53
CSTF3-208ENST00000528865 IGLV5-37A0A075B6J1 123 aa5.48□□□□□ -1.53
CSTF3-208ENST00000528865 DEFB131BA0A096LNP1 70 aa5.47□□□□□ -1.53
CSTF3-208ENST00000528865 HAMPP81172 84 aa5.47□□□□□ -1.53
CSTF3-208ENST00000528865 C11orf45Q8TAV5 145 aa5.47□□□□□ -1.53
CSTF3-208ENST00000528865 NOTCH2Q04721 2471 aa5.46□□□□□ -1.54
CSTF3-208ENST00000528865 IGKV2D-24A0A075B6R9 120 aa5.46□□□□□ -1.54
CSTF3-208ENST00000528865 TRAV10A0A0B4J240 114 aa5.46□□□□□ -1.54
CSTF3-208ENST00000528865 C7orf33Q8WU49 177 aa5.46□□□□□ -1.54
CSTF3-208ENST00000528865 IGLV5-48A0A075B6I7 105 aa5.45□□□□□ -1.54
CSTF3-208ENST00000528865 A0A1B0GW54 56 aa5.45□□□□□ -1.54
CSTF3-208ENST00000528865 SPRR1AP35321 89 aa5.45□□□□□ -1.54
CSTF3-208ENST00000528865 UNC79Q9P2D8 2635 aa5.44□□□□□ -1.54
CSTF3-208ENST00000528865 FASNP49327 2511 aaKnown RBP5.44□□□□□ -1.54
CSTF3-208ENST00000528865 KRTAP4-16G5E9R7 235 aaPredicted RBP5.44□□□□□ -1.54
CSTF3-208ENST00000528865 SERTAD4-AS1Q5TG53 156 aa5.44□□□□□ -1.54
CSTF3-208ENST00000528865 Q8N377 158 aa5.44□□□□□ -1.54
CSTF3-208ENST00000528865 PRYO14603 147 aa5.43□□□□□ -1.54
CSTF3-208ENST00000528865 KLKP1Q107X0 134 aa5.43□□□□□ -1.54
CSTF3-208ENST00000528865 FAM19A5Q7Z5A7 132 aaPredicted RBP5.43□□□□□ -1.54
CSTF3-208ENST00000528865 C20orf197Q8N268 126 aa5.43□□□□□ -1.54
CSTF3-208ENST00000528865 DHRS4-AS1Q9P1J3 65 aa5.43□□□□□ -1.54
CSTF3-208ENST00000528865 ITPR2Q14571 2701 aa5.43□□□□□ -1.54
CSTF3-208ENST00000528865 IGLV1-50A0A075B6I6 118 aa5.42□□□□□ -1.54
CSTF3-208ENST00000528865 EPM2AB3EWF7 344 aa5.42□□□□□ -1.54
CSTF3-208ENST00000528865 KRTAP24-1Q3LI83 254 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms