RNA–Protein interactions for RNA: ENST00000528627.1

NSD3-208, Transcript of nuclear receptor binding SET domain protein 3, human

TSL 2

Gene NSD3, Length 1,524 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSD3-208	ENST00000528627	IQSEC2	Q5JU85	1478 aa		0.35	□□□□□ -2.35
NSD3-208	ENST00000528627	SETBP1	Q9Y6X0	1596 aa		0.35	□□□□□ -2.35
NSD3-208	ENST00000528627	DEFB109B	Q30KR1	87 aa		0.35	□□□□□ -2.35
NSD3-208	ENST00000528627	ST20	Q9HBF5	79 aa		0.35	□□□□□ -2.35
NSD3-208	ENST00000528627	APLN	Q9ULZ1	77 aa		0.35	□□□□□ -2.35
NSD3-208	ENST00000528627	C5	P01031	1676 aa		0.35	□□□□□ -2.35
NSD3-208	ENST00000528627	CCDC18	Q5T9S5	1454 aa		0.35	□□□□□ -2.35
NSD3-208	ENST00000528627	CHD6	Q8TD26	2715 aa		0.34	□□□□□ -2.35
NSD3-208	ENST00000528627	KIAA1109	Q2LD37	5005 aa		0.34	□□□□□ -2.35
NSD3-208	ENST00000528627	CPSF4L	A6NMK7	179 aa	Known RBP	0.34	□□□□□ -2.35
NSD3-208	ENST00000528627	CEBPZOS	A8MTT3	80 aa		0.34	□□□□□ -2.35
NSD3-208	ENST00000528627		H3BUT2	72 aa		0.34	□□□□□ -2.35
NSD3-208	ENST00000528627		Q5VSD8	79 aa		0.34	□□□□□ -2.35
NSD3-208	ENST00000528627	S100A13	Q99584	98 aa		0.34	□□□□□ -2.35
NSD3-208	ENST00000528627	FXYD6	Q9H0Q3	95 aa		0.34	□□□□□ -2.35
NSD3-208	ENST00000528627	KIF14	Q15058	1648 aa		0.34	□□□□□ -2.35
NSD3-208	ENST00000528627		A0A0G2JMZ2	1700 aa		0.34	□□□□□ -2.36
NSD3-208	ENST00000528627	PPRC1	Q5VV67	1664 aa	Known RBP	0.34	□□□□□ -2.36
NSD3-208	ENST00000528627	FAT4	Q6V0I7	4981 aa		0.34	□□□□□ -2.36
NSD3-208	ENST00000528627		A0A1B0GUT8	65 aa		0.33	□□□□□ -2.36
NSD3-208	ENST00000528627	ADIRF	Q15847	76 aa		0.33	□□□□□ -2.36
NSD3-208	ENST00000528627	FMN2	Q9NZ56	1722 aa		0.33	□□□□□ -2.36
NSD3-208	ENST00000528627	CRYBG1	Q9Y4K1	1723 aa		0.33	□□□□□ -2.36
NSD3-208	ENST00000528627	ERVK-7	P63135	1459 aa		0.33	□□□□□ -2.36
NSD3-208	ENST00000528627	ARHGAP35	Q9NRY4	1499 aa		0.33	□□□□□ -2.36
NSD3-208	ENST00000528627	MAST4	O15021	2626 aa		0.33	□□□□□ -2.36
NSD3-208	ENST00000528627	KIAA0556	O60303	1618 aa		0.33	□□□□□ -2.36
NSD3-208	ENST00000528627	ANKRD36	A6QL64	1941 aa		0.33	□□□□□ -2.36
NSD3-208	ENST00000528627	TRAV21	A0A0B4J279	112 aa		0.33	□□□□□ -2.36
NSD3-208	ENST00000528627	PTPRZ1	P23471	2315 aa	Predicted RBP	0.33	□□□□□ -2.36
NSD3-208	ENST00000528627	TMEM131L	A2VDJ0	1609 aa		0.32	□□□□□ -2.36
NSD3-208	ENST00000528627	DIP2B	Q9P265	1576 aa		0.32	□□□□□ -2.36
NSD3-208	ENST00000528627	NKTR	P30414	1462 aa	Known RBP	0.32	□□□□□ -2.36
NSD3-208	ENST00000528627	ATP7B	P35670	1465 aa		0.32	□□□□□ -2.36
NSD3-208	ENST00000528627	ACYP1	P07311	99 aa		0.32	□□□□□ -2.36
NSD3-208	ENST00000528627	BVES-AS1	Q5T3Y7	98 aa		0.32	□□□□□ -2.36
NSD3-208	ENST00000528627	DEFB105A	Q8NG35	78 aa		0.32	□□□□□ -2.36
NSD3-208	ENST00000528627	GAFA1	Q96PS6	74 aa		0.32	□□□□□ -2.36
NSD3-208	ENST00000528627	PKDREJ	Q9NTG1	2253 aa		0.31	□□□□□ -2.36
NSD3-208	ENST00000528627	KANTR	A0A1W2PQU2	76 aa		0.31	□□□□□ -2.36
NSD3-208	ENST00000528627	COX7B	P24311	80 aa		0.31	□□□□□ -2.36
NSD3-208	ENST00000528627	H1FX-AS1	Q4G0G2	97 aa		0.31	□□□□□ -2.36
NSD3-208	ENST00000528627	USMG5	Q96IX5	58 aa		0.31	□□□□□ -2.36
NSD3-208	ENST00000528627		U3KQA8	63 aa		0.31	□□□□□ -2.36
NSD3-208	ENST00000528627	RGPD1	P0DJD0	1748 aa		0.31	□□□□□ -2.36
NSD3-208	ENST00000528627	RGPD2	P0DJD1	1756 aa		0.31	□□□□□ -2.36
NSD3-208	ENST00000528627	VWF	P04275	2813 aa		0.31	□□□□□ -2.36
NSD3-208	ENST00000528627	ZNF831	Q5JPB2	1677 aa		0.31	□□□□□ -2.36
NSD3-208	ENST00000528627	MAGI2	Q86UL8	1455 aa		0.3	□□□□□ -2.36
NSD3-208	ENST00000528627	SPTY2D1-AS1	A0A0U1RR47	76 aa		0.3	□□□□□ -2.36
NSD3-208	ENST00000528627		I3L3M4	83 aa		0.3	□□□□□ -2.36
NSD3-208	ENST00000528627	MRPL34	Q9BQ48	92 aa	Known RBP	0.3	□□□□□ -2.36
NSD3-208	ENST00000528627	LRRC7	Q96NW7	1537 aa		0.3	□□□□□ -2.36
NSD3-208	ENST00000528627	TENM4	Q6N022	2769 aa		0.3	□□□□□ -2.36
NSD3-208	ENST00000528627	PPL	O60437	1756 aa		0.29	□□□□□ -2.36
NSD3-208	ENST00000528627	COX8A	P10176	69 aa		0.29	□□□□□ -2.36
NSD3-208	ENST00000528627	WFDC9	Q8NEX5	89 aa		0.29	□□□□□ -2.36
NSD3-208	ENST00000528627	REV3L	O60673	3130 aa		0.29	□□□□□ -2.36
NSD3-208	ENST00000528627	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	0.29	□□□□□ -2.36	2e-14	■■■■□ 22.8
NSD3-208	ENST00000528627	USP32	Q8NFA0	1604 aa		0.29	□□□□□ -2.36
NSD3-208	ENST00000528627	ATR	Q13535	2644 aa		0.29	□□□□□ -2.36
NSD3-208	ENST00000528627	UBR5	O95071	2799 aa	Predicted RBP	0.28	□□□□□ -2.36
NSD3-208	ENST00000528627	IFI6	P09912	130 aa		0.28	□□□□□ -2.36
NSD3-208	ENST00000528627	RYR1	P21817	5038 aa		0.28	□□□□□ -2.36
NSD3-208	ENST00000528627	TSC2	P49815	1807 aa		0.28	□□□□□ -2.36
NSD3-208	ENST00000528627	PKD1L2	Q7Z442	2459 aa		0.28	□□□□□ -2.36
NSD3-208	ENST00000528627	KDM5D	Q9BY66	1539 aa		0.28	□□□□□ -2.36
NSD3-208	ENST00000528627	NCOR1	O75376	2440 aa		0.28	□□□□□ -2.37
NSD3-208	ENST00000528627	SSPO	A2VEC9	5147 aa		0.28	□□□□□ -2.37
NSD3-208	ENST00000528627	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	0.27	□□□□□ -2.37
NSD3-208	ENST00000528627	NCOA2	Q15596	1464 aa		0.27	□□□□□ -2.37
NSD3-208	ENST00000528627	KMT2C	Q8NEZ4	4911 aa	Known RBP	0.27	□□□□□ -2.37
NSD3-208	ENST00000528627	PRM1	P04553	51 aa		0.26	□□□□□ -2.37
NSD3-208	ENST00000528627	HEPN1	Q6WQI6	88 aa		0.26	□□□□□ -2.37
NSD3-208	ENST00000528627	LRP1	Q07954	4544 aa	Known RBP	0.26	□□□□□ -2.37
NSD3-208	ENST00000528627	HRNR	Q86YZ3	2850 aa	Predicted RBP	0.26	□□□□□ -2.37
NSD3-208	ENST00000528627	ALK	Q9UM73	1620 aa		0.26	□□□□□ -2.37
NSD3-208	ENST00000528627	STAB1	Q9NY15	2570 aa		0.25	□□□□□ -2.37
NSD3-208	ENST00000528627	DEFB121	Q5J5C9	76 aa		0.25	□□□□□ -2.37
NSD3-208	ENST00000528627	MAP3K4	Q9Y6R4	1608 aa		0.25	□□□□□ -2.37
NSD3-208	ENST00000528627	PKD1L1	Q8TDX9	2849 aa		0.25	□□□□□ -2.37
NSD3-208	ENST00000528627	WNK2	Q9Y3S1	2297 aa		0.25	□□□□□ -2.37
NSD3-208	ENST00000528627	LRRC37A	A6NMS7	1700 aa		0.25	□□□□□ -2.37
NSD3-208	ENST00000528627	RYR2	Q92736	4967 aa		0.25	□□□□□ -2.37
NSD3-208	ENST00000528627	SMIM13	P0DJ93	91 aa		0.24	□□□□□ -2.37
NSD3-208	ENST00000528627	NCOR2	Q9Y618	2525 aa		0.24	□□□□□ -2.37
NSD3-208	ENST00000528627	DCAF1	Q9Y4B6	1507 aa		0.24	□□□□□ -2.37
NSD3-208	ENST00000528627	SUPT6H	Q7KZ85	1726 aa	Known RBP	0.23	□□□□□ -2.37
NSD3-208	ENST00000528627	C18orf32	Q8TCD1	76 aa		0.23	□□□□□ -2.37
NSD3-208	ENST00000528627	CCDC141	Q6ZP82	1450 aa		0.23	□□□□□ -2.37
NSD3-208	ENST00000528627	PKD1L3	Q7Z443	1732 aa		0.23	□□□□□ -2.37
NSD3-208	ENST00000528627	IGSF10	Q6WRI0	2623 aa		0.23	□□□□□ -2.37
NSD3-208	ENST00000528627	NDUFA3	O95167	84 aa		0.23	□□□□□ -2.37
NSD3-208	ENST00000528627	RNF213	Q63HN8	5207 aa		0.22	□□□□□ -2.37
NSD3-208	ENST00000528627	HIVEP3	Q5T1R4	2406 aa		0.22	□□□□□ -2.37
NSD3-208	ENST00000528627	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	0.22	□□□□□ -2.37
NSD3-208	ENST00000528627	KIF20B	Q96Q89	1820 aa		0.22	□□□□□ -2.37
NSD3-208	ENST00000528627	CSPG4	Q6UVK1	2322 aa		0.22	□□□□□ -2.37
NSD3-208	ENST00000528627		A0A087WXM4	84 aa		0.22	□□□□□ -2.37
NSD3-208	ENST00000528627	BSN	Q9UPA5	3926 aa		0.22	□□□□□ -2.37

Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms