RNA–Protein interactions for RNA: ENST00000528593.1

CKAP5-209, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 2

Gene CKAP5, Length 366 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-209ENST00000528593 LITAFQ99732 161 aa3.84□□□□□ -1.79
CKAP5-209ENST00000528593 SMIM13P0DJ93 91 aa3.83□□□□□ -1.8
CKAP5-209ENST00000528593 PFN2P35080 140 aa3.83□□□□□ -1.8
CKAP5-209ENST00000528593 HINT1P49773 126 aaPredicted RBP3.83□□□□□ -1.8
CKAP5-209ENST00000528593 HSD52Q0P140 79 aa3.83□□□□□ -1.8
CKAP5-209ENST00000528593 SRSF9Q13242 221 aaKnown RBP eCLIP3.83□□□□□ -1.8
CKAP5-209ENST00000528593 ADAMTSL4-AS1Q5T5F5 129 aa3.83□□□□□ -1.8
CKAP5-209ENST00000528593 SFTA2Q6UW10 78 aa3.83□□□□□ -1.8
CKAP5-209ENST00000528593 Q6ZRN7 208 aaPredicted RBP3.83□□□□□ -1.8
CKAP5-209ENST00000528593 DAND5Q8N907 189 aa3.83□□□□□ -1.8
CKAP5-209ENST00000528593 C2orf48Q96LS8 159 aa3.83□□□□□ -1.8
CKAP5-209ENST00000528593 CAMK2N2Q96S95 79 aa3.83□□□□□ -1.8
CKAP5-209ENST00000528593 SPANXB1Q9NS25 103 aaPredicted RBP3.83□□□□□ -1.8
CKAP5-209ENST00000528593 FRAS1Q86XX4 4008 aa3.82□□□□□ -1.8
CKAP5-209ENST00000528593 DNAH5Q8TE73 4624 aa3.82□□□□□ -1.8
CKAP5-209ENST00000528593 TIMM17BO60830 172 aa3.82□□□□□ -1.8
CKAP5-209ENST00000528593 LINC00158P58513 81 aa3.82□□□□□ -1.8
CKAP5-209ENST00000528593 NPC2P61916 151 aa3.82□□□□□ -1.8
CKAP5-209ENST00000528593 CIRBPQ14011 172 aaKnown RBP3.82□□□□□ -1.8
CKAP5-209ENST00000528593 BATFQ16520 125 aa3.82□□□□□ -1.8
CKAP5-209ENST00000528593 TAL2Q16559 108 aa3.82□□□□□ -1.8
CKAP5-209ENST00000528593 C9orf116Q5BN46 136 aaPredicted RBP3.82□□□□□ -1.8
CKAP5-209ENST00000528593 Q6ZRU5 148 aa3.82□□□□□ -1.8
CKAP5-209ENST00000528593 C6orf48Q9UBA6 75 aa3.82□□□□□ -1.8
CKAP5-209ENST00000528593 ERG28Q9UKR5 140 aa3.82□□□□□ -1.8
CKAP5-209ENST00000528593 HECTD4Q9Y4D8 3996 aa3.82□□□□□ -1.8
CKAP5-209ENST00000528593 FAT2Q9NYQ8 4349 aa3.81□□□□□ -1.8
CKAP5-209ENST00000528593 TRBV30A0A0K0K1B3 111 aa3.81□□□□□ -1.8
CKAP5-209ENST00000528593 LRCOL1A6NCL2 159 aa3.81□□□□□ -1.8
CKAP5-209ENST00000528593 F8WDY8 70 aa3.81□□□□□ -1.8
CKAP5-209ENST00000528593 M0R143 59 aa3.81□□□□□ -1.8
CKAP5-209ENST00000528593 PCP4P48539 62 aa3.81□□□□□ -1.8
CKAP5-209ENST00000528593 SYCNQ0VAF6 134 aa3.81□□□□□ -1.8
CKAP5-209ENST00000528593 BVES-AS1Q5T3Y7 98 aa3.81□□□□□ -1.8
CKAP5-209ENST00000528593 C1orf134Q5TEV5 83 aa3.81□□□□□ -1.8
CKAP5-209ENST00000528593 MUSTN1Q8IVN3 82 aa3.81□□□□□ -1.8
CKAP5-209ENST00000528593 CEND1Q8N111 149 aa3.81□□□□□ -1.8
CKAP5-209ENST00000528593 MIR7-3HGQ8N6C7 128 aa3.81□□□□□ -1.8
CKAP5-209ENST00000528593 SPANXDQ9BXN6 97 aa3.81□□□□□ -1.8
CKAP5-209ENST00000528593 SNHG12Q9BXW3 62 aa3.81□□□□□ -1.8
CKAP5-209ENST00000528593 SPANXCQ9NY87 97 aa3.81□□□□□ -1.8
CKAP5-209ENST00000528593 LCE6AA0A183 80 aa3.8□□□□□ -1.8
CKAP5-209ENST00000528593 FXYD2P54710 66 aa3.8□□□□□ -1.8
CKAP5-209ENST00000528593 C14orf177Q52M58 125 aa3.8□□□□□ -1.8
CKAP5-209ENST00000528593 Q6ZVH6 145 aa3.8□□□□□ -1.8
CKAP5-209ENST00000528593 LINC00308Q8TCZ7 52 aa3.8□□□□□ -1.8
CKAP5-209ENST00000528593 CARD19Q96LW7 228 aa3.8□□□□□ -1.8
CKAP5-209ENST00000528593 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.79□□□□□ -1.8
CKAP5-209ENST00000528593 IFITM1P13164 125 aa3.79□□□□□ -1.8
CKAP5-209ENST00000528593 COX17Q14061 63 aa3.79□□□□□ -1.8
CKAP5-209ENST00000528593 SOSTDC1Q6X4U4 206 aa3.79□□□□□ -1.8
CKAP5-209ENST00000528593 NHP2Q9NX24 153 aaKnown RBP3.79□□□□□ -1.8
CKAP5-209ENST00000528593 DYNC1H1Q14204 4646 aaKnown RBP3.78□□□□□ -1.8
CKAP5-209ENST00000528593 PKD1P98161 4303 aa3.78□□□□□ -1.8
CKAP5-209ENST00000528593 DNAH8Q96JB1 4490 aa3.78□□□□□ -1.8
CKAP5-209ENST00000528593 A0A087WTM6 91 aa3.78□□□□□ -1.8
CKAP5-209ENST00000528593 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.78□□□□□ -1.8
CKAP5-209ENST00000528593 A4D1N5 150 aa3.78□□□□□ -1.8
CKAP5-209ENST00000528593 A6NDN8 102 aa3.78□□□□□ -1.8
CKAP5-209ENST00000528593 NDUFC2-KCTD14E9PQ53 114 aa3.78□□□□□ -1.8
CKAP5-209ENST00000528593 K7ERJ3 54 aa3.78□□□□□ -1.8
CKAP5-209ENST00000528593 RTL8CO15255 209 aa3.78□□□□□ -1.8
CKAP5-209ENST00000528593 KRTAP10-7P60409 375 aaPredicted RBP3.78□□□□□ -1.8
CKAP5-209ENST00000528593 CNBPP62633 177 aaKnown RBP3.78□□□□□ -1.8
CKAP5-209ENST00000528593 RPL24P83731 157 aaKnown RBP3.78□□□□□ -1.8
CKAP5-209ENST00000528593 RPL18AQ02543 176 aaKnown RBP3.78□□□□□ -1.8
CKAP5-209ENST00000528593 Q8N814 137 aa3.78□□□□□ -1.8
CKAP5-209ENST00000528593 COPS9Q8WXC6 57 aa3.78□□□□□ -1.8
CKAP5-209ENST00000528593 SND1-IT1Q9HBX3 110 aa3.78□□□□□ -1.8
CKAP5-209ENST00000528593 GAGE2EQ4V326 116 aa3.77□□□□□ -1.81
CKAP5-209ENST00000528593 COL5A1-AS1Q5SY13 56 aa3.77□□□□□ -1.81
CKAP5-209ENST00000528593 Q6ZRP5 223 aa3.77□□□□□ -1.81
CKAP5-209ENST00000528593 XAGE1AQ9HD64 81 aa3.77□□□□□ -1.81
CKAP5-209ENST00000528593 GAGE2DQ9UEU5 116 aa3.77□□□□□ -1.81
CKAP5-209ENST00000528593 LOC107984640A0A0U1RRK4 108 aa3.76□□□□□ -1.81
CKAP5-209ENST00000528593 A0A1B0GWB2 263 aa3.76□□□□□ -1.81
CKAP5-209ENST00000528593 TLX1NBP0CAT3 122 aa3.76□□□□□ -1.81
CKAP5-209ENST00000528593 CFC1BP0CG36 223 aa3.76□□□□□ -1.81
CKAP5-209ENST00000528593 CFC1P0CG37 223 aa3.76□□□□□ -1.81
CKAP5-209ENST00000528593 FUSP35637 526 aaKnown RBP eCLIP3.76□□□□□ -1.81
CKAP5-209ENST00000528593 GAGE2BQ13066 116 aa3.76□□□□□ -1.81
CKAP5-209ENST00000528593 PRR26Q8N8Z3 221 aa3.76□□□□□ -1.81
CKAP5-209ENST00000528593 Q8NDZ9 215 aa3.76□□□□□ -1.81
CKAP5-209ENST00000528593 RAB37Q96AX2 223 aa3.76□□□□□ -1.81
CKAP5-209ENST00000528593 PPDPFQ9H3Y8 114 aa3.76□□□□□ -1.81
CKAP5-209ENST00000528593 LOC107984156A0A0G2JMH3 177 aa3.75□□□□□ -1.81
CKAP5-209ENST00000528593 TAX1BP3O14907 124 aa3.75□□□□□ -1.81
CKAP5-209ENST00000528593 LINC01620Q4KN68 170 aa3.75□□□□□ -1.81
CKAP5-209ENST00000528593 C9orf129Q5T035 196 aaKnown RBP3.75□□□□□ -1.81
CKAP5-209ENST00000528593 ARL17AQ8IVW1 177 aa3.75□□□□□ -1.81
CKAP5-209ENST00000528593 IGKV2-28A0A075B6P5 120 aa3.74□□□□□ -1.81
CKAP5-209ENST00000528593 A0A096LNI7 61 aa3.74□□□□□ -1.81
CKAP5-209ENST00000528593 IGLV5-52A0A0A0MRZ9 124 aa3.74□□□□□ -1.81
CKAP5-209ENST00000528593 A0A0B4J2C4 111 aa3.74□□□□□ -1.81
CKAP5-209ENST00000528593 IGKV2-24A0A0C4DH68 120 aa3.74□□□□□ -1.81
CKAP5-209ENST00000528593 H7C2G1 150 aa3.74□□□□□ -1.81
CKAP5-209ENST00000528593 NCR3O14931 201 aa3.74□□□□□ -1.81
CKAP5-209ENST00000528593 IGKV2D-28P01615 120 aa3.74□□□□□ -1.81
CKAP5-209ENST00000528593 MT3P25713 68 aa3.74□□□□□ -1.81
CKAP5-209ENST00000528593 RPL13AP40429 203 aaKnown RBP3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms