RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 IBA57-AS1B1ANH7 110 aa3.07□□□□□ -1.92
PCF11-202ENST00000528336 SNCGO76070 127 aa3.07□□□□□ -1.92
PCF11-202ENST00000528336 DYNLRB2Q8TF09 96 aa3.07□□□□□ -1.92
PCF11-202ENST00000528336 DNHD1Q96M86 4753 aa3.07□□□□□ -1.92
PCF11-202ENST00000528336 UBE2L5PA0A1B0GUS4 154 aa3.06□□□□□ -1.92
PCF11-202ENST00000528336 CRYM-AS1A6NIL9 109 aa3.06□□□□□ -1.92
PCF11-202ENST00000528336 P0C880 135 aa3.06□□□□□ -1.92
PCF11-202ENST00000528336 ADCYAP1P18509 176 aa3.06□□□□□ -1.92
PCF11-202ENST00000528336 UBE2L3P68036 154 aaKnown RBP3.06□□□□□ -1.92
PCF11-202ENST00000528336 PLGLAQ15195 96 aa3.06□□□□□ -1.92
PCF11-202ENST00000528336 SPANXN1Q5VSR9 72 aa3.06□□□□□ -1.92
PCF11-202ENST00000528336 C9orf163Q8N9P6 203 aa3.06□□□□□ -1.92
PCF11-202ENST00000528336 TMEM167AQ8TBQ9 72 aa3.06□□□□□ -1.92
PCF11-202ENST00000528336 PIGBOS1A0A0B4J2F0 54 aa3.05□□□□□ -1.92
PCF11-202ENST00000528336 LOC107984156A0A0G2JMH3 177 aa3.05□□□□□ -1.92
PCF11-202ENST00000528336 HMSDA8MTL9 139 aa3.05□□□□□ -1.92
PCF11-202ENST00000528336 FXYD3Q14802 87 aa3.05□□□□□ -1.92
PCF11-202ENST00000528336 KRTAP13-2Q52LG2 175 aa3.05□□□□□ -1.92
PCF11-202ENST00000528336 FAM74A1Q5RGS3 127 aa3.05□□□□□ -1.92
PCF11-202ENST00000528336 KRTAP26-1Q6PEX3 210 aa3.05□□□□□ -1.92
PCF11-202ENST00000528336 ARL17AQ8IVW1 177 aa3.05□□□□□ -1.92
PCF11-202ENST00000528336 Q9BRP9 147 aa3.05□□□□□ -1.92
PCF11-202ENST00000528336 ANK2Q01484 3957 aa3.05□□□□□ -1.92
PCF11-202ENST00000528336 MUC21A0A140T8X8 626 aa3.04□□□□□ -1.92
PCF11-202ENST00000528336 G3V318 75 aa3.04□□□□□ -1.92
PCF11-202ENST00000528336 SFT2D2O95562 160 aa3.04□□□□□ -1.92
PCF11-202ENST00000528336 ASIPP42127 132 aa3.04□□□□□ -1.92
PCF11-202ENST00000528336 Q1T7F1 81 aa3.04□□□□□ -1.92
PCF11-202ENST00000528336 C10orf55Q5SWW7 151 aa3.04□□□□□ -1.92
PCF11-202ENST00000528336 CASC2Q6XLA1 102 aa3.04□□□□□ -1.92
PCF11-202ENST00000528336 TMEM254Q8TBM7 123 aa3.04□□□□□ -1.92
PCF11-202ENST00000528336 MYOZ3Q8TDC0 251 aa3.04□□□□□ -1.92
PCF11-202ENST00000528336 TMEM141Q96I45 108 aa3.04□□□□□ -1.92
PCF11-202ENST00000528336 FAM103A1Q9BTL3 118 aaKnown RBP3.04□□□□□ -1.92
PCF11-202ENST00000528336 TMEM14BQ9NUH8 114 aa3.04□□□□□ -1.92
PCF11-202ENST00000528336 PRO2289Q9P1D8 64 aa3.04□□□□□ -1.92
PCF11-202ENST00000528336 CACFD1Q9UGQ2 172 aa3.04□□□□□ -1.92
PCF11-202ENST00000528336 NDUFA12Q9UI09 145 aa3.04□□□□□ -1.92
PCF11-202ENST00000528336 TNCP24821 2201 aa3.04□□□□□ -1.92
PCF11-202ENST00000528336 TMSB15BA0A087X1C1 80 aa3.03□□□□□ -1.92
PCF11-202ENST00000528336 TCRBV4S1A1TA0A5B7 111 aa3.03□□□□□ -1.92
PCF11-202ENST00000528336 IGLC7A0M8Q6 106 aa3.03□□□□□ -1.92
PCF11-202ENST00000528336 H3BUA1 57 aa3.03□□□□□ -1.92
PCF11-202ENST00000528336 K7EP34 96 aa3.03□□□□□ -1.92
PCF11-202ENST00000528336 TRAPPC2P0DI81 140 aa3.03□□□□□ -1.92
PCF11-202ENST00000528336 TRAPPC2BP0DI82 140 aa3.03□□□□□ -1.92
PCF11-202ENST00000528336 SLC25A6P12236 298 aa3.03□□□□□ -1.92
PCF11-202ENST00000528336 KLK9Q2XQG4 91 aa3.03□□□□□ -1.92
PCF11-202ENST00000528336 NMSQ5H8A3 153 aa3.03□□□□□ -1.92
PCF11-202ENST00000528336 UNQ5815/PRO19632Q6UWF5 114 aa3.03□□□□□ -1.92
PCF11-202ENST00000528336 C10orf99Q6UWK7 81 aa3.03□□□□□ -1.92
PCF11-202ENST00000528336 NDUFA11Q86Y39 141 aa3.03□□□□□ -1.92
PCF11-202ENST00000528336 C15orf53Q8NAA6 179 aa3.03□□□□□ -1.92
PCF11-202ENST00000528336 NDUFA4L2Q9NRX3 87 aa3.03□□□□□ -1.92
PCF11-202ENST00000528336 KLK9Q9UKQ9 250 aa3.03□□□□□ -1.92
PCF11-202ENST00000528336 MGAM2Q2M2H8 2515 aa3.03□□□□□ -1.92
PCF11-202ENST00000528336 TRAV10A0A0B4J240 114 aa3.02□□□□□ -1.93
PCF11-202ENST00000528336 TRAV12-1A0A0B4J245 112 aa3.02□□□□□ -1.93
PCF11-202ENST00000528336 FAM223BA6NKX1 122 aa3.02□□□□□ -1.93
PCF11-202ENST00000528336 SNRPGP15A8MWD9 76 aa3.02□□□□□ -1.93
PCF11-202ENST00000528336 ERC2-IT1O76042 136 aa3.02□□□□□ -1.93
PCF11-202ENST00000528336 APELAP0DMC3 54 aa3.02□□□□□ -1.93
PCF11-202ENST00000528336 SNCAP37840 140 aa3.02□□□□□ -1.93
PCF11-202ENST00000528336 PRCDQ00LT1 54 aa3.02□□□□□ -1.93
PCF11-202ENST00000528336 WT1-ASQ06250 92 aa3.02□□□□□ -1.93
PCF11-202ENST00000528336 FAM223AQ8IWN6 122 aa3.02□□□□□ -1.93
PCF11-202ENST00000528336 ZNF431Q8TF32 576 aaPredicted RBP3.02□□□□□ -1.93
PCF11-202ENST00000528336 C4orf3Q8WVX3 66 aa3.02□□□□□ -1.93
PCF11-202ENST00000528336 USMG5Q96IX5 58 aa3.02□□□□□ -1.93
PCF11-202ENST00000528336 WNK1Q9H4A3 2382 aa3.02□□□□□ -1.93
PCF11-202ENST00000528336 VWFP04275 2813 aa3.01□□□□□ -1.93
PCF11-202ENST00000528336 F8W1H4 67 aa3.01□□□□□ -1.93
PCF11-202ENST00000528336 PRH1P02810 166 aa3.01□□□□□ -1.93
PCF11-202ENST00000528336 CCKP06307 115 aa3.01□□□□□ -1.93
PCF11-202ENST00000528336 ERHP84090 104 aaKnown RBP3.01□□□□□ -1.93
PCF11-202ENST00000528336 MIR22HGQ0VDD5 57 aa3.01□□□□□ -1.93
PCF11-202ENST00000528336 TDRG1Q3Y452 100 aa3.01□□□□□ -1.93
PCF11-202ENST00000528336 PRR9Q5T870 116 aa3.01□□□□□ -1.93
PCF11-202ENST00000528336 Q8TAT8 98 aa3.01□□□□□ -1.93
PCF11-202ENST00000528336 PKD1L1Q8TDX9 2849 aa3□□□□□ -1.93
PCF11-202ENST00000528336 TRBV7-1A0A0A6YYK4 115 aa3□□□□□ -1.93
PCF11-202ENST00000528336 TRBV7-7A0A0K0K1E9 115 aa3□□□□□ -1.93
PCF11-202ENST00000528336 A0A1W2PNM2 257 aa3□□□□□ -1.93
PCF11-202ENST00000528336 CEBPZOSA8MTT3 80 aa3□□□□□ -1.93
PCF11-202ENST00000528336 NMBP08949 121 aa3□□□□□ -1.93
PCF11-202ENST00000528336 CBLN1P23435 193 aa3□□□□□ -1.93
PCF11-202ENST00000528336 SPINK9Q5DT21 86 aa3□□□□□ -1.93
PCF11-202ENST00000528336 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3□□□□□ -1.93
PCF11-202ENST00000528336 MRPL35Q9NZE8 188 aaKnown RBP3□□□□□ -1.93
PCF11-202ENST00000528336 NBEAL1Q6ZS30 2694 aa2.99□□□□□ -1.93
PCF11-202ENST00000528336 TRRAPQ9Y4A5 3859 aa2.99□□□□□ -1.93
PCF11-202ENST00000528336 I3L2K1 104 aa2.99□□□□□ -1.93
PCF11-202ENST00000528336 K7EIM0 57 aa2.99□□□□□ -1.93
PCF11-202ENST00000528336 RNASE2P10153 161 aaKnown RBP2.99□□□□□ -1.93
PCF11-202ENST00000528336 HRES1P13985 223 aa2.99□□□□□ -1.93
PCF11-202ENST00000528336 RBM3P98179 157 aaKnown RBP2.99□□□□□ -1.93
PCF11-202ENST00000528336 DEFA5Q01523 94 aa2.99□□□□□ -1.93
PCF11-202ENST00000528336 PEA15Q15121 130 aa2.99□□□□□ -1.93
PCF11-202ENST00000528336 RHOHQ15669 191 aa2.99□□□□□ -1.93
PCF11-202ENST00000528336 DEFB136Q30KP8 78 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 173.8 ms