RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 HSPB8Q9UJY1 196 aa19.71■□□□□ 0.75
SSSCA1-205ENST00000527920 HERV-K104P63124 156 aa19.7■□□□□ 0.74
SSSCA1-205ENST00000527920 PLNP26678 52 aa19.68■□□□□ 0.74
SSSCA1-205ENST00000527920 Q8NDZ9 215 aa19.68■□□□□ 0.74
SSSCA1-205ENST00000527920 H0Y8G0 127 aa19.67■□□□□ 0.74
SSSCA1-205ENST00000527920 UBE2AP49459 152 aa19.67■□□□□ 0.74
SSSCA1-205ENST00000527920 LINC00587B1AMM8 73 aa19.65■□□□□ 0.74
SSSCA1-205ENST00000527920 NDUFA12Q9UI09 145 aa19.65■□□□□ 0.74
SSSCA1-205ENST00000527920 TMEM126AQ9H061 195 aa19.64■□□□□ 0.73
SSSCA1-205ENST00000527920 MYMXA0A1B0GTQ4 84 aa19.62■□□□□ 0.73
SSSCA1-205ENST00000527920 SMIM13P0DJ93 91 aa19.62■□□□□ 0.73
SSSCA1-205ENST00000527920 A0A0U1RRA0 63 aa19.61■□□□□ 0.73
SSSCA1-205ENST00000527920 ATP6V1G1O75348 118 aa19.61■□□□□ 0.73
SSSCA1-205ENST00000527920 MEIG1Q5JSS6 88 aa19.61■□□□□ 0.73
SSSCA1-205ENST00000527920 FABP4P15090 132 aa19.6■□□□□ 0.73
SSSCA1-205ENST00000527920 TMEM238C9JI98 176 aa19.59■□□□□ 0.73
SSSCA1-205ENST00000527920 M0R378 163 aa19.59■□□□□ 0.73
SSSCA1-205ENST00000527920 DPM2O94777 84 aa19.59■□□□□ 0.73
SSSCA1-205ENST00000527920 PLEKHB2Q96CS7 222 aa19.59■□□□□ 0.73
SSSCA1-205ENST00000527920 LEPROTO15243 131 aa19.58■□□□□ 0.72
SSSCA1-205ENST00000527920 CRYGAP11844 174 aa19.58■□□□□ 0.72
SSSCA1-205ENST00000527920 MIR7-3HGQ8N6C7 128 aa19.57■□□□□ 0.72
SSSCA1-205ENST00000527920 A0A087X002 238 aa19.56■□□□□ 0.72
SSSCA1-205ENST00000527920 FAM19A1Q7Z5A9 133 aa19.56■□□□□ 0.72
SSSCA1-205ENST00000527920 MAP1LC3CQ9BXW4 147 aa19.56■□□□□ 0.72
SSSCA1-205ENST00000527920 TSPEAR-AS2P59090 65 aa19.55■□□□□ 0.72
SSSCA1-205ENST00000527920 HERVK_113P61574 105 aa19.55■□□□□ 0.72
SSSCA1-205ENST00000527920 PRLHP81277 87 aa19.54■□□□□ 0.72
SSSCA1-205ENST00000527920 BOD1L2Q8IYS8 172 aa19.54■□□□□ 0.72
SSSCA1-205ENST00000527920 IGKCP01834 107 aa19.53■□□□□ 0.72
SSSCA1-205ENST00000527920 FAM229BQ4G0N7 80 aa19.52■□□□□ 0.72
SSSCA1-205ENST00000527920 IGKV2D-26A0A0A0MRZ7 120 aa19.51■□□□□ 0.71
SSSCA1-205ENST00000527920 J3QQQ9 107 aa19.51■□□□□ 0.71
SSSCA1-205ENST00000527920 NMUP48645 174 aa19.51■□□□□ 0.71
SSSCA1-205ENST00000527920 HIST1H2BKO60814 126 aa19.5■□□□□ 0.71
SSSCA1-205ENST00000527920 HIST1H2BJP06899 126 aa19.5■□□□□ 0.71
SSSCA1-205ENST00000527920 HIST1H2BOP23527 126 aa19.5■□□□□ 0.71
SSSCA1-205ENST00000527920 HIST1H2BBP33778 126 aa19.5■□□□□ 0.71
SSSCA1-205ENST00000527920 HIST1H2BDP58876 126 aa19.5■□□□□ 0.71
SSSCA1-205ENST00000527920 HIST1H2BCP62807 126 aa19.5■□□□□ 0.71
SSSCA1-205ENST00000527920 HIST2H2BEQ16778 126 aa19.5■□□□□ 0.71
SSSCA1-205ENST00000527920 HIST2H2BFQ5QNW6 126 aaPredicted RBP19.5■□□□□ 0.71
SSSCA1-205ENST00000527920 HIST1H2BHQ93079 126 aa19.5■□□□□ 0.71
SSSCA1-205ENST00000527920 HIST1H2BNQ99877 126 aa19.5■□□□□ 0.71
SSSCA1-205ENST00000527920 HIST1H2BMQ99879 126 aa19.5■□□□□ 0.71
SSSCA1-205ENST00000527920 PMCHL2Q9BQD1 86 aa19.5■□□□□ 0.71
SSSCA1-205ENST00000527920 TYMSOSQ8TAI1 123 aa19.48■□□□□ 0.71
SSSCA1-205ENST00000527920 LOC107984156A0A0G2JMH3 177 aa19.47■□□□□ 0.71
SSSCA1-205ENST00000527920 ARL17AQ8IVW1 177 aa19.47■□□□□ 0.71
SSSCA1-205ENST00000527920 ANAPC11Q9NYG5 84 aa19.45■□□□□ 0.7
SSSCA1-205ENST00000527920 PRYO14603 147 aa19.44■□□□□ 0.7
SSSCA1-205ENST00000527920 LGALS3P17931 250 aaKnown RBP19.44■□□□□ 0.7
SSSCA1-205ENST00000527920 KCNQ1DNQ9H478 68 aa19.43■□□□□ 0.7
SSSCA1-205ENST00000527920 KRTAP13-2Q52LG2 175 aa19.42■□□□□ 0.7
SSSCA1-205ENST00000527920 NCR3O14931 201 aa19.41■□□□□ 0.7
SSSCA1-205ENST00000527920 SYS1-DBNDD2H3BUS1 97 aa19.4■□□□□ 0.7
SSSCA1-205ENST00000527920 SPRR1AP35321 89 aa19.4■□□□□ 0.7
SSSCA1-205ENST00000527920 E9PLD3 99 aa19.38■□□□□ 0.69
SSSCA1-205ENST00000527920 LINC00337Q8N6G1 96 aa19.38■□□□□ 0.69
SSSCA1-205ENST00000527920 DAND5Q8N907 189 aa19.37■□□□□ 0.69
SSSCA1-205ENST00000527920 HIGD2AQ9BW72 106 aa19.37■□□□□ 0.69
SSSCA1-205ENST00000527920 TRBV10-3A0A0K0K1G6 114 aa19.35■□□□□ 0.69
SSSCA1-205ENST00000527920 TRBV10-2A0A0K0K1G8 114 aa19.35■□□□□ 0.69
SSSCA1-205ENST00000527920 KRTAP4-16G5E9R7 235 aaPredicted RBP19.33■□□□□ 0.68
SSSCA1-205ENST00000527920 LINC01545Q5VT33 79 aa19.33■□□□□ 0.68
SSSCA1-205ENST00000527920 MIEN1Q9BRT3 115 aa19.33■□□□□ 0.68
SSSCA1-205ENST00000527920 S100A12P80511 92 aa19.32■□□□□ 0.68
SSSCA1-205ENST00000527920 PET117Q6UWS5 81 aa19.32■□□□□ 0.68
SSSCA1-205ENST00000527920 TSPAN13O95857 204 aa19.31■□□□□ 0.68
SSSCA1-205ENST00000527920 COA6Q5JTJ3 125 aaKnown RBP19.31■□□□□ 0.68
SSSCA1-205ENST00000527920 SPANXB1Q9NS25 103 aaPredicted RBP19.31■□□□□ 0.68
SSSCA1-205ENST00000527920 LPAP08519 4548 aa19.3■□□□□ 0.68
SSSCA1-205ENST00000527920 NDUFC2O95298 119 aa19.3■□□□□ 0.68
SSSCA1-205ENST00000527920 PRR4Q16378 134 aa19.3■□□□□ 0.68
SSSCA1-205ENST00000527920 A0A0J9YXY3 114 aa19.29■□□□□ 0.68
SSSCA1-205ENST00000527920 SPRR4Q96PI1 79 aa19.29■□□□□ 0.68
SSSCA1-205ENST00000527920 ZNF706Q9Y5V0 76 aaPredicted RBP19.29■□□□□ 0.68
SSSCA1-205ENST00000527920 ETDCA0A1B0GVM5 59 aa19.28■□□□□ 0.68
SSSCA1-205ENST00000527920 CTAG1AP78358 180 aa19.27■□□□□ 0.68
SSSCA1-205ENST00000527920 LINC00304Q8N9R0 145 aa19.27■□□□□ 0.68
SSSCA1-205ENST00000527920 RNF213Q63HN8 5207 aa19.27■□□□□ 0.68
SSSCA1-205ENST00000527920 DDTP30046 118 aa19.26■□□□□ 0.67
SSSCA1-205ENST00000527920 ADAMTSL4-AS1Q5T5F5 129 aa19.22■□□□□ 0.67
SSSCA1-205ENST00000527920 IGLV6-57P01721 117 aa19.2■□□□□ 0.66
SSSCA1-205ENST00000527920 C3orf79P0CE67 100 aa19.2■□□□□ 0.66
SSSCA1-205ENST00000527920 SOSTDC1Q6X4U4 206 aa19.2■□□□□ 0.66
SSSCA1-205ENST00000527920 B5MCH6 92 aa19.19■□□□□ 0.66
SSSCA1-205ENST00000527920 SMCR5Q8TEV8 140 aa19.19■□□□□ 0.66
SSSCA1-205ENST00000527920 TIMM17BO60830 172 aa19.18■□□□□ 0.66
SSSCA1-205ENST00000527920 C3orf22Q8N5N4 141 aa19.18■□□□□ 0.66
SSSCA1-205ENST00000527920 EIF4EBP3O60516 100 aaPredicted RBP19.16■□□□□ 0.66
SSSCA1-205ENST00000527920 S100A7L2Q5SY68 101 aa19.16■□□□□ 0.66
SSSCA1-205ENST00000527920 LITAFQ99732 161 aa19.16■□□□□ 0.66
SSSCA1-205ENST00000527920 Q6ZRX8 168 aa19.13■□□□□ 0.65
SSSCA1-205ENST00000527920 KRTDAPP60985 99 aa19.12■□□□□ 0.65
SSSCA1-205ENST00000527920 NPC2P61916 151 aa19.12■□□□□ 0.65
SSSCA1-205ENST00000527920 LINC00483Q53H64 154 aa19.12■□□□□ 0.65
SSSCA1-205ENST00000527920 TRAV23DV6A0A075B6W5 121 aa19.1■□□□□ 0.65
SSSCA1-205ENST00000527920 ZNF815PA8K554 130 aa19.1■□□□□ 0.65
SSSCA1-205ENST00000527920 SPAG11AQ6PDA7 123 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 152.5 ms