RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 GCN1Q92616 2671 aaKnown RBP10.36□□□□□ -0.75
USP47-207ENST00000527733 IGLV5-52A0A0A0MRZ9 124 aa10.36□□□□□ -0.75
USP47-207ENST00000527733 SETXQ7Z333 2677 aaKnown RBP10.35□□□□□ -0.75
USP47-207ENST00000527733 PLAC8L1A1L4L8 177 aa10.35□□□□□ -0.75
USP47-207ENST00000527733 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.35□□□□□ -0.75
USP47-207ENST00000527733 SPATA3Q8NHX4 192 aa10.34□□□□□ -0.75
USP47-207ENST00000527733 ASPMQ8IZT6 3477 aa10.34□□□□□ -0.75
USP47-207ENST00000527733 Q8N3U1 123 aa10.33□□□□□ -0.76
USP47-207ENST00000527733 LINC00588Q9Y4M8 146 aa10.33□□□□□ -0.76
USP47-207ENST00000527733 COL12A1Q99715 3063 aa10.33□□□□□ -0.76
USP47-207ENST00000527733 LINC00643Q86TS7 51 aa10.32□□□□□ -0.76
USP47-207ENST00000527733 ZNF706Q9Y5V0 76 aaPredicted RBP10.32□□□□□ -0.76
USP47-207ENST00000527733 NDUFS5O43920 106 aa10.32□□□□□ -0.76
USP47-207ENST00000527733 LINC00612Q8N6U2 182 aa10.32□□□□□ -0.76
USP47-207ENST00000527733 PPDPFQ9H3Y8 114 aa10.32□□□□□ -0.76
USP47-207ENST00000527733 CCKP06307 115 aa10.3□□□□□ -0.76
USP47-207ENST00000527733 KALRNO60229 2985 aa10.3□□□□□ -0.76
USP47-207ENST00000527733 BPY2O14599 106 aa10.29□□□□□ -0.76
USP47-207ENST00000527733 ENHOQ6UWT2 76 aa10.29□□□□□ -0.76
USP47-207ENST00000527733 LRBAP50851 2863 aa10.29□□□□□ -0.76
USP47-207ENST00000527733 REG3GQ6UW15 175 aa10.28□□□□□ -0.76
USP47-207ENST00000527733 MRPL55Q7Z7F7 128 aaKnown RBP10.28□□□□□ -0.76
USP47-207ENST00000527733 LINC00337Q8N6G1 96 aa10.27□□□□□ -0.76
USP47-207ENST00000527733 Q8N814 137 aa10.27□□□□□ -0.76
USP47-207ENST00000527733 LAMA5O15230 3695 aa10.27□□□□□ -0.77
USP47-207ENST00000527733 DNAH10OSP0CZ25 163 aa10.27□□□□□ -0.77
USP47-207ENST00000527733 NBDYA0A0U1RRE5 68 aa10.26□□□□□ -0.77
USP47-207ENST00000527733 C6orf48Q9UBA6 75 aa10.26□□□□□ -0.77
USP47-207ENST00000527733 H0Y9J4 135 aa10.26□□□□□ -0.77
USP47-207ENST00000527733 TM2D3Q9BRN9 247 aa10.26□□□□□ -0.77
USP47-207ENST00000527733 TACC2O95359 2948 aa10.26□□□□□ -0.77
USP47-207ENST00000527733 WWC2-AS2Q96NR7 200 aa10.26□□□□□ -0.77
USP47-207ENST00000527733 NDUFV3P56181 108 aaKnown RBP10.25□□□□□ -0.77
USP47-207ENST00000527733 FAM236AA0A1B0GUQ0 79 aa10.25□□□□□ -0.77
USP47-207ENST00000527733 FAM236BA0A1B0GV22 79 aa10.25□□□□□ -0.77
USP47-207ENST00000527733 C10orf25Q5T742 122 aa10.24□□□□□ -0.77
USP47-207ENST00000527733 DCHS1Q96JQ0 3298 aa10.24□□□□□ -0.77
USP47-207ENST00000527733 PRYO14603 147 aa10.24□□□□□ -0.77
USP47-207ENST00000527733 ATOX1O00244 68 aa10.23□□□□□ -0.77
USP47-207ENST00000527733 UBR5O95071 2799 aaPredicted RBP10.23□□□□□ -0.77
USP47-207ENST00000527733 A0A087WYN8 130 aa10.23□□□□□ -0.77
USP47-207ENST00000527733 NOTCH1P46531 2555 aa10.22□□□□□ -0.77
USP47-207ENST00000527733 C22orf24Q9Y442 160 aa10.22□□□□□ -0.77
USP47-207ENST00000527733 ITPR2Q14571 2701 aa10.22□□□□□ -0.77
USP47-207ENST00000527733 WIPF1O43516 503 aa10.21□□□□□ -0.77
USP47-207ENST00000527733 C3orf84H3BNL1 204 aa10.21□□□□□ -0.78
USP47-207ENST00000527733 ATP5EP2Q5VTU8 51 aa10.2□□□□□ -0.78
USP47-207ENST00000527733 UPK3BQ9BT76 320 aa10.19□□□□□ -0.78
USP47-207ENST00000527733 ITPR1Q14643 2758 aa10.19□□□□□ -0.78
USP47-207ENST00000527733 SOSTDC1Q6X4U4 206 aa10.19□□□□□ -0.78
USP47-207ENST00000527733 SS18L2Q9UHA2 77 aa10.19□□□□□ -0.78
USP47-207ENST00000527733 GVQW2A0A096LPI5 108 aaPredicted RBP10.18□□□□□ -0.78
USP47-207ENST00000527733 IGLV9-49A0A0B4J1Y8 123 aa10.18□□□□□ -0.78
USP47-207ENST00000527733 FAM19A3Q7Z5A8 133 aa10.18□□□□□ -0.78
USP47-207ENST00000527733 LINC00575Q6W349 94 aa10.18□□□□□ -0.78
USP47-207ENST00000527733 ZNF575Q86XF7 245 aa10.18□□□□□ -0.78
USP47-207ENST00000527733 MP68P56378 58 aa10.17□□□□□ -0.78
USP47-207ENST00000527733 C1orf137Q5JT78 98 aa10.17□□□□□ -0.78
USP47-207ENST00000527733 SDIM1Q6ZPB5 146 aa10.17□□□□□ -0.78
USP47-207ENST00000527733 PRR34Q9NV39 138 aa10.17□□□□□ -0.78
USP47-207ENST00000527733 SCXQ7RTU7 201 aa10.16□□□□□ -0.78
USP47-207ENST00000527733 SMIM20Q8N5G0 67 aa10.16□□□□□ -0.78
USP47-207ENST00000527733 MT-ATP8P03928 68 aa10.15□□□□□ -0.78
USP47-207ENST00000527733 LINC00167Q96N53 147 aa10.14□□□□□ -0.79
USP47-207ENST00000527733 UTP20O75691 2785 aaKnown RBP10.12□□□□□ -0.79
USP47-207ENST00000527733 PRLHP81277 87 aa10.12□□□□□ -0.79
USP47-207ENST00000527733 HRCT1Q6UXD1 115 aa10.11□□□□□ -0.79
USP47-207ENST00000527733 RELNP78509 3460 aa10.11□□□□□ -0.79
USP47-207ENST00000527733 SPINK6Q6UWN8 80 aa10.1□□□□□ -0.79
USP47-207ENST00000527733 LITAFQ99732 161 aa10.1□□□□□ -0.79
USP47-207ENST00000527733 FAM240AA0A1B0GVK7 77 aa10.09□□□□□ -0.79
USP47-207ENST00000527733 Q9BRP9 147 aa10.09□□□□□ -0.79
USP47-207ENST00000527733 C16orf90A8MZG2 172 aa10.08□□□□□ -0.8
USP47-207ENST00000527733 Q6JHZ5 121 aa10.08□□□□□ -0.8
USP47-207ENST00000527733 ZFHX4Q86UP3 3567 aa10.08□□□□□ -0.8
USP47-207ENST00000527733 RTL8CO15255 209 aa10.08□□□□□ -0.8
USP47-207ENST00000527733 SMCR5Q8TEV8 140 aa10.08□□□□□ -0.8
USP47-207ENST00000527733 Q6ZRP5 223 aa10.06□□□□□ -0.8
USP47-207ENST00000527733 KIAA0087Q14695 138 aa10.06□□□□□ -0.8
USP47-207ENST00000527733 APCP25054 2843 aa10.06□□□□□ -0.8
USP47-207ENST00000527733 IMUPQ9GZP8 106 aa10.05□□□□□ -0.8
USP47-207ENST00000527733 TRBV7-6A0A0J9YX20 115 aa10.05□□□□□ -0.8
USP47-207ENST00000527733 B5MCH6 92 aa10.05□□□□□ -0.8
USP47-207ENST00000527733 HIVEP1P15822 2718 aa10.04□□□□□ -0.8
USP47-207ENST00000527733 CIRBP-AS1Q8TBR5 109 aa10.03□□□□□ -0.8
USP47-207ENST00000527733 APLNQ9ULZ1 77 aa10.03□□□□□ -0.8
USP47-207ENST00000527733 C15orf56Q8N910 161 aa10.02□□□□□ -0.81
USP47-207ENST00000527733 VPREB1P12018 145 aa10.02□□□□□ -0.81
USP47-207ENST00000527733 PHF5AQ7RTV0 110 aaKnown RBP10.02□□□□□ -0.81
USP47-207ENST00000527733 XGP55808 180 aa10.01□□□□□ -0.81
USP47-207ENST00000527733 ELOF1P60002 83 aaKnown RBP10.01□□□□□ -0.81
USP47-207ENST00000527733 CHTF8P0CG12 524 aa10.01□□□□□ -0.81
USP47-207ENST00000527733 FAM218AQ96MZ4 157 aa10□□□□□ -0.81
USP47-207ENST00000527733 IGKV4-1P06312 121 aa9.99□□□□□ -0.81
USP47-207ENST00000527733 WFDC13Q8IUB5 93 aa9.99□□□□□ -0.81
USP47-207ENST00000527733 Q6ZRX8 168 aa9.98□□□□□ -0.81
USP47-207ENST00000527733 A0A087WSZ3 146 aa9.98□□□□□ -0.81
USP47-207ENST00000527733 IGLV6-57P01721 117 aa9.96□□□□□ -0.81
USP47-207ENST00000527733 NSD1Q96L73 2696 aaPredicted RBP9.96□□□□□ -0.82
USP47-207ENST00000527733 EIF4EBP3O60516 100 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms