RNA–Protein interactions for RNA: ENST00000527612.1

PPFIA1-209, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-209ENST00000527612 TMEM238C9JI98 176 aa3.99□□□□□ -1.77
PPFIA1-209ENST00000527612 M0R378 163 aa3.99□□□□□ -1.77
PPFIA1-209ENST00000527612 PRLHP81277 87 aa3.99□□□□□ -1.77
PPFIA1-209ENST00000527612 COX17Q14061 63 aa3.99□□□□□ -1.77
PPFIA1-209ENST00000527612 TMEM170BQ5T4T1 132 aa3.99□□□□□ -1.77
PPFIA1-209ENST00000527612 CHCHD1Q96BP2 118 aaKnown RBP3.99□□□□□ -1.77
PPFIA1-209ENST00000527612 TMEM126AQ9H061 195 aa3.99□□□□□ -1.77
PPFIA1-209ENST00000527612 TRAV12-1A0A0B4J245 112 aa3.98□□□□□ -1.77
PPFIA1-209ENST00000527612 TMEM223A0PJW6 202 aa3.98□□□□□ -1.77
PPFIA1-209ENST00000527612 SFTA2Q6UW10 78 aa3.98□□□□□ -1.77
PPFIA1-209ENST00000527612 ANAPC11Q9NYG5 84 aa3.98□□□□□ -1.77
PPFIA1-209ENST00000527612 CHTOPQ9Y3Y2 248 aaKnown RBP3.98□□□□□ -1.77
PPFIA1-209ENST00000527612 CRYGAP11844 174 aa3.97□□□□□ -1.77
PPFIA1-209ENST00000527612 UBE2AP49459 152 aa3.97□□□□□ -1.77
PPFIA1-209ENST00000527612 TSPEAR-AS2P59090 65 aa3.97□□□□□ -1.77
PPFIA1-209ENST00000527612 FAM229BQ4G0N7 80 aa3.97□□□□□ -1.77
PPFIA1-209ENST00000527612 IFI27L1Q96BM0 104 aa3.97□□□□□ -1.77
PPFIA1-209ENST00000527612 PRR4Q16378 134 aa3.96□□□□□ -1.78
PPFIA1-209ENST00000527612 FAM19A1Q7Z5A9 133 aa3.96□□□□□ -1.78
PPFIA1-209ENST00000527612 FAM19A2Q8N3H0 131 aa3.96□□□□□ -1.78
PPFIA1-209ENST00000527612 TYMSOSQ8TAI1 123 aa3.96□□□□□ -1.78
PPFIA1-209ENST00000527612 HSBP1O75506 76 aa3.95□□□□□ -1.78
PPFIA1-209ENST00000527612 SERF1AO75920 110 aa3.95□□□□□ -1.78
PPFIA1-209ENST00000527612 TSPAN13O95857 204 aa3.95□□□□□ -1.78
PPFIA1-209ENST00000527612 TRGC2P03986 189 aa3.95□□□□□ -1.78
PPFIA1-209ENST00000527612 SMIM13P0DJ93 91 aa3.95□□□□□ -1.78
PPFIA1-209ENST00000527612 RPL24P83731 157 aaKnown RBP3.95□□□□□ -1.78
PPFIA1-209ENST00000527612 A0A0U1RRA0 63 aa3.94□□□□□ -1.78
PPFIA1-209ENST00000527612 KRTAP4-16G5E9R7 235 aaPredicted RBP3.94□□□□□ -1.78
PPFIA1-209ENST00000527612 SPRR1AP35321 89 aa3.94□□□□□ -1.78
PPFIA1-209ENST00000527612 LINC00158P58513 81 aa3.94□□□□□ -1.78
PPFIA1-209ENST00000527612 MIR7-3HGQ8N6C7 128 aa3.94□□□□□ -1.78
PPFIA1-209ENST00000527612 LINC00304Q8N9R0 145 aa3.94□□□□□ -1.78
PPFIA1-209ENST00000527612 PLEKHB2Q96CS7 222 aa3.94□□□□□ -1.78
PPFIA1-209ENST00000527612 RETNLBQ9BQ08 111 aa3.94□□□□□ -1.78
PPFIA1-209ENST00000527612 PRYO14603 147 aa3.93□□□□□ -1.78
PPFIA1-209ENST00000527612 NCR3O14931 201 aa3.93□□□□□ -1.78
PPFIA1-209ENST00000527612 BOD1L2Q8IYS8 172 aa3.93□□□□□ -1.78
PPFIA1-209ENST00000527612 LINC00518Q8N0U6 118 aa3.93□□□□□ -1.78
PPFIA1-209ENST00000527612 C3orf22Q8N5N4 141 aa3.93□□□□□ -1.78
PPFIA1-209ENST00000527612 SPRR4Q96PI1 79 aa3.93□□□□□ -1.78
PPFIA1-209ENST00000527612 HIGD2AQ9BW72 106 aa3.93□□□□□ -1.78
PPFIA1-209ENST00000527612 NDUFA12Q9UI09 145 aa3.93□□□□□ -1.78
PPFIA1-209ENST00000527612 IGKV2D-26A0A0A0MRZ7 120 aa3.92□□□□□ -1.78
PPFIA1-209ENST00000527612 H0Y8G0 127 aa3.92□□□□□ -1.78
PPFIA1-209ENST00000527612 LCE2BO14633 110 aa3.92□□□□□ -1.78
PPFIA1-209ENST00000527612 LEPROTL1O95214 131 aa3.92□□□□□ -1.78
PPFIA1-209ENST00000527612 PLNP26678 52 aa3.92□□□□□ -1.78
PPFIA1-209ENST00000527612 HERV-K104P63124 156 aa3.92□□□□□ -1.78
PPFIA1-209ENST00000527612 MEIG1Q5JSS6 88 aa3.92□□□□□ -1.78
PPFIA1-209ENST00000527612 LINC00337Q8N6G1 96 aa3.92□□□□□ -1.78
PPFIA1-209ENST00000527612 DAND5Q8N907 189 aa3.92□□□□□ -1.78
PPFIA1-209ENST00000527612 KCNQ1DNQ9H478 68 aa3.92□□□□□ -1.78
PPFIA1-209ENST00000527612 LOC107984156A0A0G2JMH3 177 aa3.91□□□□□ -1.78
PPFIA1-209ENST00000527612 TRBV10-3A0A0K0K1G6 114 aa3.91□□□□□ -1.78
PPFIA1-209ENST00000527612 COLCA2A8K830 154 aa3.91□□□□□ -1.78
PPFIA1-209ENST00000527612 CTAG1AP78358 180 aa3.91□□□□□ -1.78
PPFIA1-209ENST00000527612 ARL17AQ8IVW1 177 aa3.91□□□□□ -1.78
PPFIA1-209ENST00000527612 SMCR5Q8TEV8 140 aa3.91□□□□□ -1.78
PPFIA1-209ENST00000527612 PMCHL2Q9BQD1 86 aa3.91□□□□□ -1.78
PPFIA1-209ENST00000527612 MYMXA0A1B0GTQ4 84 aa3.9□□□□□ -1.79
PPFIA1-209ENST00000527612 J3QQQ9 107 aa3.9□□□□□ -1.79
PPFIA1-209ENST00000527612 LEPROTO15243 131 aa3.9□□□□□ -1.79
PPFIA1-209ENST00000527612 EIF4EBP3O60516 100 aaPredicted RBP3.9□□□□□ -1.79
PPFIA1-209ENST00000527612 DPM2O94777 84 aa3.9□□□□□ -1.79
PPFIA1-209ENST00000527612 TPRXLQ17RH7 258 aa3.9□□□□□ -1.79
PPFIA1-209ENST00000527612 FABP4P15090 132 aa3.89□□□□□ -1.79
PPFIA1-209ENST00000527612 LINC00483Q53H64 154 aa3.89□□□□□ -1.79
PPFIA1-209ENST00000527612 SOSTDC1Q6X4U4 206 aa3.89□□□□□ -1.79
PPFIA1-209ENST00000527612 Q9BRP9 147 aa3.89□□□□□ -1.79
PPFIA1-209ENST00000527612 HSPB8Q9UJY1 196 aa3.89□□□□□ -1.79
PPFIA1-209ENST00000527612 TRBV10-2A0A0K0K1G8 114 aa3.88□□□□□ -1.79
PPFIA1-209ENST00000527612 LINC00587B1AMM8 73 aa3.88□□□□□ -1.79
PPFIA1-209ENST00000527612 B5MCH6 92 aa3.88□□□□□ -1.79
PPFIA1-209ENST00000527612 HIST1H2BKO60814 126 aa3.88□□□□□ -1.79
PPFIA1-209ENST00000527612 ERC2-IT1O76042 136 aa3.88□□□□□ -1.79
PPFIA1-209ENST00000527612 IGLV6-57P01721 117 aa3.88□□□□□ -1.79
PPFIA1-209ENST00000527612 IGKCP01834 107 aa3.88□□□□□ -1.79
PPFIA1-209ENST00000527612 HIST1H2BJP06899 126 aa3.88□□□□□ -1.79
PPFIA1-209ENST00000527612 HIST1H2BOP23527 126 aa3.88□□□□□ -1.79
PPFIA1-209ENST00000527612 HIST1H2BBP33778 126 aa3.88□□□□□ -1.79
PPFIA1-209ENST00000527612 NMUP48645 174 aa3.88□□□□□ -1.79
PPFIA1-209ENST00000527612 HIST1H2BDP58876 126 aa3.88□□□□□ -1.79
PPFIA1-209ENST00000527612 HIST1H2BCP62807 126 aa3.88□□□□□ -1.79
PPFIA1-209ENST00000527612 HIST2H2BEQ16778 126 aa3.88□□□□□ -1.79
PPFIA1-209ENST00000527612 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.88□□□□□ -1.79
PPFIA1-209ENST00000527612 Q6ZRX8 168 aa3.88□□□□□ -1.79
PPFIA1-209ENST00000527612 HIST1H2BHQ93079 126 aa3.88□□□□□ -1.79
PPFIA1-209ENST00000527612 HIST1H2BNQ99877 126 aa3.88□□□□□ -1.79
PPFIA1-209ENST00000527612 HIST1H2BMQ99879 126 aa3.88□□□□□ -1.79
PPFIA1-209ENST00000527612 MAP1LC3CQ9BXW4 147 aa3.88□□□□□ -1.79
PPFIA1-209ENST00000527612 SPANXB1Q9NS25 103 aaPredicted RBP3.88□□□□□ -1.79
PPFIA1-209ENST00000527612 ZNF706Q9Y5V0 76 aaPredicted RBP3.88□□□□□ -1.79
PPFIA1-209ENST00000527612 A0A0J9YXY3 114 aa3.87□□□□□ -1.79
PPFIA1-209ENST00000527612 ETDCA0A1B0GVM5 59 aa3.87□□□□□ -1.79
PPFIA1-209ENST00000527612 NDUFC2O95298 119 aa3.87□□□□□ -1.79
PPFIA1-209ENST00000527612 DDTP30046 118 aa3.87□□□□□ -1.79
PPFIA1-209ENST00000527612 HERVK_113P61574 105 aa3.87□□□□□ -1.79
PPFIA1-209ENST00000527612 S100A12P80511 92 aa3.87□□□□□ -1.79
PPFIA1-209ENST00000527612 Q8NBF4 154 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms