RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 CYSTM1Q9H1C7 97 aa8.62□□□□□ -1.03
CAPN1-208ENST00000527323 C9orf116Q5BN46 136 aaPredicted RBP8.61□□□□□ -1.03
CAPN1-208ENST00000527323 S100A7L2Q5SY68 101 aa8.61□□□□□ -1.03
CAPN1-208ENST00000527323 LINC00269Q8N2A0 174 aa8.61□□□□□ -1.03
CAPN1-208ENST00000527323 A0A1B0GUV1 79 aa8.6□□□□□ -1.03
CAPN1-208ENST00000527323 NANOS2P60321 138 aaKnown RBP8.6□□□□□ -1.03
CAPN1-208ENST00000527323 C6orf99Q4VX62 202 aa8.6□□□□□ -1.03
CAPN1-208ENST00000527323 ANGP03950 147 aaKnown RBP8.59□□□□□ -1.03
CAPN1-208ENST00000527323 TRAV23DV6A0A075B6W5 121 aa8.59□□□□□ -1.03
CAPN1-208ENST00000527323 PRO0255Q9UI72 69 aa8.59□□□□□ -1.03
CAPN1-208ENST00000527323 ENHOQ6UWT2 76 aa8.58□□□□□ -1.04
CAPN1-208ENST00000527323 KIR2DL5BQ8NHK3 375 aa8.58□□□□□ -1.04
CAPN1-208ENST00000527323 CHCHD10Q8WYQ3 142 aaPredicted RBP8.58□□□□□ -1.04
CAPN1-208ENST00000527323 UBL5Q9BZL1 73 aa8.58□□□□□ -1.04
CAPN1-208ENST00000527323 FAM19A5Q7Z5A7 132 aaPredicted RBP8.57□□□□□ -1.04
CAPN1-208ENST00000527323 FAM19A1Q7Z5A9 133 aa8.57□□□□□ -1.04
CAPN1-208ENST00000527323 MDFIQ99750 246 aa8.57□□□□□ -1.04
CAPN1-208ENST00000527323 CD164L2Q6UWJ8 174 aa8.57□□□□□ -1.04
CAPN1-208ENST00000527323 GHRHP01286 108 aa8.57□□□□□ -1.04
CAPN1-208ENST00000527323 NDUFC2O95298 119 aa8.56□□□□□ -1.04
CAPN1-208ENST00000527323 LINC00167Q96N53 147 aa8.56□□□□□ -1.04
CAPN1-208ENST00000527323 LAMTOR3Q9UHA4 124 aa8.56□□□□□ -1.04
CAPN1-208ENST00000527323 KIAA0087Q14695 138 aa8.56□□□□□ -1.04
CAPN1-208ENST00000527323 Q8N3U1 123 aa8.56□□□□□ -1.04
CAPN1-208ENST00000527323 COX17Q14061 63 aa8.55□□□□□ -1.04
CAPN1-208ENST00000527323 TMEM258P61165 79 aa8.55□□□□□ -1.04
CAPN1-208ENST00000527323 REG3AQ06141 175 aa8.55□□□□□ -1.04
CAPN1-208ENST00000527323 DSCR8Q96T75 97 aa8.54□□□□□ -1.04
CAPN1-208ENST00000527323 UPK3BQ9BT76 320 aa8.54□□□□□ -1.04
CAPN1-208ENST00000527323 DNHD1Q96M86 4753 aa8.54□□□□□ -1.04
CAPN1-208ENST00000527323 RBM3P98179 157 aaKnown RBP8.54□□□□□ -1.04
CAPN1-208ENST00000527323 ATP5EP2Q5VTU8 51 aa8.54□□□□□ -1.04
CAPN1-208ENST00000527323 RPS28P62857 69 aaKnown RBP8.53□□□□□ -1.04
CAPN1-208ENST00000527323 DPH3Q96FX2 82 aa8.53□□□□□ -1.04
CAPN1-208ENST00000527323 DEFB135Q30KP9 77 aa8.53□□□□□ -1.04
CAPN1-208ENST00000527323 STAB2Q8WWQ8 2551 aa8.53□□□□□ -1.04
CAPN1-208ENST00000527323 TENM2Q9NT68 2774 aa8.53□□□□□ -1.04
CAPN1-208ENST00000527323 UNQ6190/PRO20217Q6UXQ8 127 aa8.52□□□□□ -1.04
CAPN1-208ENST00000527323 LINC00575Q6W349 94 aa8.52□□□□□ -1.04
CAPN1-208ENST00000527323 CMYA5Q8N3K9 4069 aa8.52□□□□□ -1.05
CAPN1-208ENST00000527323 C6orf223Q8N319 242 aa8.52□□□□□ -1.05
CAPN1-208ENST00000527323 LINC00612Q8N6U2 182 aa8.52□□□□□ -1.05
CAPN1-208ENST00000527323 Q8NDZ9 215 aa8.52□□□□□ -1.05
CAPN1-208ENST00000527323 HAMPP81172 84 aa8.52□□□□□ -1.05
CAPN1-208ENST00000527323 X6R8D5 127 aa8.52□□□□□ -1.05
CAPN1-208ENST00000527323 COL7A1Q02388 2944 aa8.51□□□□□ -1.05
CAPN1-208ENST00000527323 C10orf25Q5T742 122 aa8.51□□□□□ -1.05
CAPN1-208ENST00000527323 RETNQ9HD89 108 aa8.51□□□□□ -1.05
CAPN1-208ENST00000527323 HTN3P15516 51 aa8.5□□□□□ -1.05
CAPN1-208ENST00000527323 SPAG11BQ08648 103 aa8.5□□□□□ -1.05
CAPN1-208ENST00000527323 MRAPQ8TCY5 172 aa8.5□□□□□ -1.05
CAPN1-208ENST00000527323 KRTAP10-11P60412 298 aa8.5□□□□□ -1.05
CAPN1-208ENST00000527323 C20orf197Q8N268 126 aa8.5□□□□□ -1.05
CAPN1-208ENST00000527323 TGP01266 2768 aa8.5□□□□□ -1.05
CAPN1-208ENST00000527323 IGHV4-28A0A0C4DH34 117 aa8.5□□□□□ -1.05
CAPN1-208ENST00000527323 SMIM9A6NGZ8 99 aa8.5□□□□□ -1.05
CAPN1-208ENST00000527323 J3QL48 77 aa8.5□□□□□ -1.05
CAPN1-208ENST00000527323 DAD1P61803 113 aa8.49□□□□□ -1.05
CAPN1-208ENST00000527323 C5orf47Q569G3 176 aa8.48□□□□□ -1.05
CAPN1-208ENST00000527323 Q6ZQT0 140 aa8.48□□□□□ -1.05
CAPN1-208ENST00000527323 Q6ZQY7 126 aa8.48□□□□□ -1.05
CAPN1-208ENST00000527323 LYRM9A8MSI8 78 aa8.47□□□□□ -1.05
CAPN1-208ENST00000527323 LYPD5Q6UWN5 251 aa8.47□□□□□ -1.05
CAPN1-208ENST00000527323 TRBV10-3A0A0K0K1G6 114 aa8.47□□□□□ -1.05
CAPN1-208ENST00000527323 M0R2N4 97 aa8.47□□□□□ -1.05
CAPN1-208ENST00000527323 KLK12Q9UKR0 248 aa8.47□□□□□ -1.05
CAPN1-208ENST00000527323 C9orf66Q5T8R8 295 aa8.46□□□□□ -1.05
CAPN1-208ENST00000527323 XAGE1AQ9HD64 81 aa8.45□□□□□ -1.06
CAPN1-208ENST00000527323 WIPF1O43516 503 aa8.45□□□□□ -1.06
CAPN1-208ENST00000527323 IGHV4-30-4P0DP06 118 aa8.45□□□□□ -1.06
CAPN1-208ENST00000527323 LINC01547P58512 204 aaPredicted RBP8.44□□□□□ -1.06
CAPN1-208ENST00000527323 Q6ZVQ6 151 aa8.44□□□□□ -1.06
CAPN1-208ENST00000527323 CSMD3Q7Z407 3707 aa8.44□□□□□ -1.06
CAPN1-208ENST00000527323 LOC110117498A0A087WWA1 95 aa8.43□□□□□ -1.06
CAPN1-208ENST00000527323 OXTP01178 125 aa8.43□□□□□ -1.06
CAPN1-208ENST00000527323 IGLV6-57P01721 117 aa8.42□□□□□ -1.06
CAPN1-208ENST00000527323 DIRC1Q969H9 104 aa8.42□□□□□ -1.06
CAPN1-208ENST00000527323 CELA1Q9UNI1 258 aa8.41□□□□□ -1.06
CAPN1-208ENST00000527323 A0A0J9YWU9 116 aa8.41□□□□□ -1.06
CAPN1-208ENST00000527323 SCXQ7RTU7 201 aa8.41□□□□□ -1.06
CAPN1-208ENST00000527323 TRAV7A0A075B6U4 112 aa8.4□□□□□ -1.06
CAPN1-208ENST00000527323 TRAV10A0A0B4J240 114 aa8.4□□□□□ -1.06
CAPN1-208ENST00000527323 PDE6GP18545 87 aa8.4□□□□□ -1.06
CAPN1-208ENST00000527323 NDUFC2-KCTD14E9PQ53 114 aa8.4□□□□□ -1.06
CAPN1-208ENST00000527323 LELP1Q5T871 98 aa8.4□□□□□ -1.06
CAPN1-208ENST00000527323 C4orf26Q17RF5 130 aa8.4□□□□□ -1.07
CAPN1-208ENST00000527323 MUC7Q8TAX7 377 aa8.4□□□□□ -1.07
CAPN1-208ENST00000527323 COX7BP24311 80 aa8.39□□□□□ -1.07
CAPN1-208ENST00000527323 FAM236DA0A1B0GTK5 79 aa8.39□□□□□ -1.07
CAPN1-208ENST00000527323 FAM236CP0DP71 79 aa8.39□□□□□ -1.07
CAPN1-208ENST00000527323 APOC4P55056 127 aa8.39□□□□□ -1.07
CAPN1-208ENST00000527323 ZNF73O43830 326 aaPredicted RBP8.38□□□□□ -1.07
CAPN1-208ENST00000527323 C6orf48Q9UBA6 75 aa8.38□□□□□ -1.07
CAPN1-208ENST00000527323 SNURFQ9Y675 71 aa8.38□□□□□ -1.07
CAPN1-208ENST00000527323 SPART-AS1P0CW21 52 aa8.38□□□□□ -1.07
CAPN1-208ENST00000527323 H3BQ85 93 aa8.38□□□□□ -1.07
CAPN1-208ENST00000527323 HIGD2BQ4VC39 106 aa8.38□□□□□ -1.07
CAPN1-208ENST00000527323 HRCT1Q6UXD1 115 aa8.37□□□□□ -1.07
CAPN1-208ENST00000527323 SERTAD4-AS1Q5TG53 156 aa8.36□□□□□ -1.07
CAPN1-208ENST00000527323 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 270.8 ms