RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 HERVK_113P63121 156 aa8.21□□□□□ -1.1
CAPN1-207ENST00000527189 GAGE2EQ4V326 116 aa8.21□□□□□ -1.1
CAPN1-207ENST00000527189 ZC2HC1BQ5TFG8 222 aa8.21□□□□□ -1.1
CAPN1-207ENST00000527189 C14orf144Q96I85 54 aa8.21□□□□□ -1.1
CAPN1-207ENST00000527189 GAGE2DQ9UEU5 116 aa8.21□□□□□ -1.1
CAPN1-207ENST00000527189 COX8AP10176 69 aa8.2□□□□□ -1.1
CAPN1-207ENST00000527189 C6orf226Q5I0X4 101 aa8.2□□□□□ -1.1
CAPN1-207ENST00000527189 C2orf82Q6UX34 121 aa8.2□□□□□ -1.1
CAPN1-207ENST00000527189 Q8IZM0 81 aa8.2□□□□□ -1.1
CAPN1-207ENST00000527189 FAM168BA1KXE4 195 aa8.19□□□□□ -1.1
CAPN1-207ENST00000527189 IGLV7-43P04211 117 aa8.19□□□□□ -1.1
CAPN1-207ENST00000527189 CKS1BP61024 79 aa8.19□□□□□ -1.1
CAPN1-207ENST00000527189 DIRC1Q969H9 104 aa8.19□□□□□ -1.1
CAPN1-207ENST00000527189 DLEU1O43261 78 aa8.18□□□□□ -1.1
CAPN1-207ENST00000527189 CST9LQ9H4G1 147 aa8.18□□□□□ -1.1
CAPN1-207ENST00000527189 GEMIN7Q9H840 131 aaKnown RBP8.18□□□□□ -1.1
CAPN1-207ENST00000527189 CTAG1AP78358 180 aa8.17□□□□□ -1.1
CAPN1-207ENST00000527189 TMEM170BQ5T4T1 132 aa8.17□□□□□ -1.1
CAPN1-207ENST00000527189 FAM19A5Q7Z5A7 132 aaPredicted RBP8.17□□□□□ -1.1
CAPN1-207ENST00000527189 KRTAP7-1Q8IUC3 87 aa8.17□□□□□ -1.1
CAPN1-207ENST00000527189 TOMM7Q9P0U1 55 aa8.17□□□□□ -1.1
CAPN1-207ENST00000527189 CDKN2A-AS1Q9UH64 79 aa8.17□□□□□ -1.1
CAPN1-207ENST00000527189 FAT4Q6V0I7 4981 aa8.17□□□□□ -1.1
CAPN1-207ENST00000527189 C11orf86A6NJI1 115 aa8.16□□□□□ -1.1
CAPN1-207ENST00000527189 H3BRM9 83 aa8.16□□□□□ -1.1
CAPN1-207ENST00000527189 M0QXV9 152 aa8.16□□□□□ -1.1
CAPN1-207ENST00000527189 ANKRD39Q53RE8 183 aa8.16□□□□□ -1.1
CAPN1-207ENST00000527189 C9orf129Q5T035 196 aaKnown RBP8.16□□□□□ -1.1
CAPN1-207ENST00000527189 KRTAP9-6A0A140TA67 174 aa8.15□□□□□ -1.1
CAPN1-207ENST00000527189 CXCL5P42830 114 aa8.15□□□□□ -1.1
CAPN1-207ENST00000527189 UBE2BP63146 152 aa8.15□□□□□ -1.1
CAPN1-207ENST00000527189 BATFQ16520 125 aa8.15□□□□□ -1.1
CAPN1-207ENST00000527189 KRTAP11-1Q8IUC1 163 aa8.15□□□□□ -1.1
CAPN1-207ENST00000527189 TINCRA0A1B0GVN0 87 aa8.14□□□□□ -1.11
CAPN1-207ENST00000527189 E9PLD3 99 aa8.14□□□□□ -1.11
CAPN1-207ENST00000527189 H0Y9J4 135 aa8.14□□□□□ -1.11
CAPN1-207ENST00000527189 LGALS3P17931 250 aaKnown RBP8.14□□□□□ -1.11
CAPN1-207ENST00000527189 BOD1L2Q8IYS8 172 aa8.14□□□□□ -1.11
CAPN1-207ENST00000527189 PLEKHB2Q96CS7 222 aa8.14□□□□□ -1.11
CAPN1-207ENST00000527189 COL5A1-AS1Q5SY13 56 aa8.13□□□□□ -1.11
CAPN1-207ENST00000527189 IGLV5-45A0A087WSX0 123 aa8.12□□□□□ -1.11
CAPN1-207ENST00000527189 HSD52Q0P140 79 aa8.12□□□□□ -1.11
CAPN1-207ENST00000527189 SCGB1D4Q6XE38 83 aa8.12□□□□□ -1.11
CAPN1-207ENST00000527189 LINC00469Q8N7U9 141 aa8.12□□□□□ -1.11
CAPN1-207ENST00000527189 HIGD1BQ9P298 99 aa8.12□□□□□ -1.11
CAPN1-207ENST00000527189 A6NDN8 102 aa8.11□□□□□ -1.11
CAPN1-207ENST00000527189 SMIM1B2RUZ4 78 aa8.11□□□□□ -1.11
CAPN1-207ENST00000527189 C22orf24Q9Y442 160 aa8.11□□□□□ -1.11
CAPN1-207ENST00000527189 IGLV1-50A0A075B6I6 118 aa8.1□□□□□ -1.11
CAPN1-207ENST00000527189 MYMXA0A1B0GTQ4 84 aa8.1□□□□□ -1.11
CAPN1-207ENST00000527189 ZNF815PA8K554 130 aa8.1□□□□□ -1.11
CAPN1-207ENST00000527189 LEPROTO15243 131 aa8.1□□□□□ -1.11
CAPN1-207ENST00000527189 TP73-AS1Q9UF72 201 aa8.1□□□□□ -1.11
CAPN1-207ENST00000527189 HINT1P49773 126 aaPredicted RBP8.09□□□□□ -1.11
CAPN1-207ENST00000527189 TAL2Q16559 108 aa8.09□□□□□ -1.11
CAPN1-207ENST00000527189 COX7B2Q8TF08 81 aa8.09□□□□□ -1.11
CAPN1-207ENST00000527189 XAGE1AQ9HD64 81 aa8.09□□□□□ -1.11
CAPN1-207ENST00000527189 ZNF861PO60384 105 aa8.08□□□□□ -1.12
CAPN1-207ENST00000527189 ZNF22P17026 224 aaPredicted RBP8.08□□□□□ -1.12
CAPN1-207ENST00000527189 PCP2Q8IVA1 136 aa8.08□□□□□ -1.12
CAPN1-207ENST00000527189 PRR26Q8N8Z3 221 aa8.08□□□□□ -1.12
CAPN1-207ENST00000527189 SNHG12Q9BXW3 62 aa8.08□□□□□ -1.12
CAPN1-207ENST00000527189 TMEM238LA0A1B0GVL6 79 aa8.07□□□□□ -1.12
CAPN1-207ENST00000527189 TMEM223A0PJW6 202 aa8.07□□□□□ -1.12
CAPN1-207ENST00000527189 A6NJY4 79 aa8.07□□□□□ -1.12
CAPN1-207ENST00000527189 J3QQQ9 107 aa8.07□□□□□ -1.12
CAPN1-207ENST00000527189 KRTAP1-4P0C5Y4 121 aa8.07□□□□□ -1.12
CAPN1-207ENST00000527189 MRPL55Q7Z7F7 128 aaKnown RBP8.07□□□□□ -1.12
CAPN1-207ENST00000527189 LPAP08519 4548 aa8.07□□□□□ -1.12
CAPN1-207ENST00000527189 IGKV2D-26A0A0A0MRZ7 120 aa8.06□□□□□ -1.12
CAPN1-207ENST00000527189 RPL13AP40429 203 aaKnown RBP8.06□□□□□ -1.12
CAPN1-207ENST00000527189 HIST1H4GQ99525 98 aa8.06□□□□□ -1.12
CAPN1-207ENST00000527189 TMEM238C9JI98 176 aa8.05□□□□□ -1.12
CAPN1-207ENST00000527189 MUC2Q02817 5179 aa8.05□□□□□ -1.12
CAPN1-207ENST00000527189 SPINK8P0C7L1 97 aa8.04□□□□□ -1.12
CAPN1-207ENST00000527189 BVES-AS1Q5T3Y7 98 aa8.04□□□□□ -1.12
CAPN1-207ENST00000527189 C2orf91Q6ZV80 131 aa8.04□□□□□ -1.12
CAPN1-207ENST00000527189 COPS9Q8WXC6 57 aa8.04□□□□□ -1.12
CAPN1-207ENST00000527189 SFTA2Q6UW10 78 aa8.03□□□□□ -1.12
CAPN1-207ENST00000527189 IGLV5-37A0A075B6J1 123 aa8.02□□□□□ -1.13
CAPN1-207ENST00000527189 IGLV5-39A0A0G2JS06 123 aa8.02□□□□□ -1.13
CAPN1-207ENST00000527189 BCE1O60756 84 aa8.02□□□□□ -1.13
CAPN1-207ENST00000527189 RPL28P46779 137 aaKnown RBP8.02□□□□□ -1.13
CAPN1-207ENST00000527189 LINC00167Q96N53 147 aa8.02□□□□□ -1.13
CAPN1-207ENST00000527189 CEND1Q8N111 149 aa8.01□□□□□ -1.13
CAPN1-207ENST00000527189 COX17Q14061 63 aa8□□□□□ -1.13
CAPN1-207ENST00000527189 SPANXB1Q9NS25 103 aaPredicted RBP8□□□□□ -1.13
CAPN1-207ENST00000527189 NDUFA12Q9UI09 145 aa8□□□□□ -1.13
CAPN1-207ENST00000527189 HERV-K104P63124 156 aa7.99□□□□□ -1.13
CAPN1-207ENST00000527189 Q6ZVH6 145 aa7.99□□□□□ -1.13
CAPN1-207ENST00000527189 NKAPP1Q8N9T2 125 aa7.99□□□□□ -1.13
CAPN1-207ENST00000527189 TTTY13Q9BZ97 58 aa7.99□□□□□ -1.13
CAPN1-207ENST00000527189 RPL37AP8A6NKH3 93 aa7.98□□□□□ -1.13
CAPN1-207ENST00000527189 SMIM13P0DJ93 91 aa7.98□□□□□ -1.13
CAPN1-207ENST00000527189 RPL24P83731 157 aaKnown RBP7.98□□□□□ -1.13
CAPN1-207ENST00000527189 A0A1B0GV90 55 aa7.96□□□□□ -1.14
CAPN1-207ENST00000527189 TIMM17BO60830 172 aa7.96□□□□□ -1.14
CAPN1-207ENST00000527189 PFN2P35080 140 aa7.96□□□□□ -1.14
CAPN1-207ENST00000527189 MEIG1Q5JSS6 88 aa7.96□□□□□ -1.14
CAPN1-207ENST00000527189 LYRM7Q5U5X0 104 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms