RNA–Protein interactions for RNA: ENST00000526821.5

ATPAF1-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 1,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-208ENST00000526821 KRTAP5-11Q6L8G4 156 aa4.05□□□□□ -1.76
ATPAF1-208ENST00000526821 SMIM29Q86T20 159 aa4.05□□□□□ -1.76
ATPAF1-208ENST00000526821 C15orf56Q8N910 161 aa4.05□□□□□ -1.76
ATPAF1-208ENST00000526821 PPDPFQ9H3Y8 114 aa4.05□□□□□ -1.76
ATPAF1-208ENST00000526821 TOMM7Q9P0U1 55 aa4.05□□□□□ -1.76
ATPAF1-208ENST00000526821 DNAH2Q9P225 4427 aa4.05□□□□□ -1.76
ATPAF1-208ENST00000526821 GAGE10A6NGK3 116 aa4.04□□□□□ -1.76
ATPAF1-208ENST00000526821 CXCL5P42830 114 aa4.04□□□□□ -1.76
ATPAF1-208ENST00000526821 SRSF9Q13242 221 aaKnown RBP eCLIP4.04□□□□□ -1.76
ATPAF1-208ENST00000526821 GTF2H5Q6ZYL4 71 aa4.04□□□□□ -1.76
ATPAF1-208ENST00000526821 MUC7Q8TAX7 377 aa4.04□□□□□ -1.76
ATPAF1-208ENST00000526821 DNAH6Q9C0G6 4158 aa4.03□□□□□ -1.76
ATPAF1-208ENST00000526821 IGKV2D-24A0A075B6R9 120 aa4.03□□□□□ -1.76
ATPAF1-208ENST00000526821 GVQW2A0A096LPI5 108 aaPredicted RBP4.03□□□□□ -1.76
ATPAF1-208ENST00000526821 A6NDN8 102 aa4.03□□□□□ -1.76
ATPAF1-208ENST00000526821 K7EP34 96 aa4.03□□□□□ -1.76
ATPAF1-208ENST00000526821 SMIM13P0DJ93 91 aa4.03□□□□□ -1.76
ATPAF1-208ENST00000526821 IFITM1P13164 125 aa4.03□□□□□ -1.76
ATPAF1-208ENST00000526821 SPAG11BQ08648 103 aa4.03□□□□□ -1.76
ATPAF1-208ENST00000526821 CIRBPQ14011 172 aaKnown RBP4.03□□□□□ -1.76
ATPAF1-208ENST00000526821 C2orf82Q6UX34 121 aa4.03□□□□□ -1.76
ATPAF1-208ENST00000526821 MUSTN1Q8IVN3 82 aa4.03□□□□□ -1.76
ATPAF1-208ENST00000526821 UBE2DNLQ8IWF7 75 aa4.03□□□□□ -1.76
ATPAF1-208ENST00000526821 RMI2Q96E14 147 aa4.03□□□□□ -1.76
ATPAF1-208ENST00000526821 ALMS1Q8TCU4 4167 aa4.02□□□□□ -1.77
ATPAF1-208ENST00000526821 LOC107984156A0A0G2JMH3 177 aa4.02□□□□□ -1.77
ATPAF1-208ENST00000526821 NBDYA0A0U1RRE5 68 aa4.02□□□□□ -1.77
ATPAF1-208ENST00000526821 A0A1B0GV72 72 aa4.02□□□□□ -1.77
ATPAF1-208ENST00000526821 A4D1N5 150 aa4.02□□□□□ -1.77
ATPAF1-208ENST00000526821 F8WDY8 70 aa4.02□□□□□ -1.77
ATPAF1-208ENST00000526821 CKS1BP61024 79 aa4.02□□□□□ -1.77
ATPAF1-208ENST00000526821 COX17Q14061 63 aa4.02□□□□□ -1.77
ATPAF1-208ENST00000526821 MEIG1Q5JSS6 88 aa4.02□□□□□ -1.77
ATPAF1-208ENST00000526821 CFAP161Q6P656 301 aa4.02□□□□□ -1.77
ATPAF1-208ENST00000526821 SOSTDC1Q6X4U4 206 aa4.02□□□□□ -1.77
ATPAF1-208ENST00000526821 ARL17AQ8IVW1 177 aa4.02□□□□□ -1.77
ATPAF1-208ENST00000526821 C6orf223Q8N319 242 aa4.02□□□□□ -1.77
ATPAF1-208ENST00000526821 DAND5Q8N907 189 aa4.02□□□□□ -1.77
ATPAF1-208ENST00000526821 LINC00308Q8TCZ7 52 aa4.02□□□□□ -1.77
ATPAF1-208ENST00000526821 C2orf48Q96LS8 159 aa4.02□□□□□ -1.77
ATPAF1-208ENST00000526821 Q9HAA7 133 aa4.02□□□□□ -1.77
ATPAF1-208ENST00000526821 NHP2Q9NX24 153 aaKnown RBP4.02□□□□□ -1.77
ATPAF1-208ENST00000526821 ERG28Q9UKR5 140 aa4.02□□□□□ -1.77
ATPAF1-208ENST00000526821 KMT2AQ03164 3969 aa4.02□□□□□ -1.77
ATPAF1-208ENST00000526821 TRBV30A0A0K0K1B3 111 aa4.01□□□□□ -1.77
ATPAF1-208ENST00000526821 CFC1BP0CG36 223 aa4.01□□□□□ -1.77
ATPAF1-208ENST00000526821 CFC1P0CG37 223 aa4.01□□□□□ -1.77
ATPAF1-208ENST00000526821 RPL24P83731 157 aaKnown RBP4.01□□□□□ -1.77
ATPAF1-208ENST00000526821 TTC32Q5I0X7 151 aa4.01□□□□□ -1.77
ATPAF1-208ENST00000526821 CASC10Q5T4H9 136 aa4.01□□□□□ -1.77
ATPAF1-208ENST00000526821 UNQ6190/PRO20217Q6UXQ8 127 aa4.01□□□□□ -1.77
ATPAF1-208ENST00000526821 LINC00526Q96FQ7 95 aa4.01□□□□□ -1.77
ATPAF1-208ENST00000526821 C6orf48Q9UBA6 75 aa4.01□□□□□ -1.77
ATPAF1-208ENST00000526821 TRAV16A0A0A6YYK6 109 aaPredicted RBP4□□□□□ -1.77
ATPAF1-208ENST00000526821 A0A0B4J2C4 111 aa4□□□□□ -1.77
ATPAF1-208ENST00000526821 A0A0U1RRA0 63 aa4□□□□□ -1.77
ATPAF1-208ENST00000526821 USP17L23D6RBM5 183 aa4□□□□□ -1.77
ATPAF1-208ENST00000526821 K7ERJ3 54 aa4□□□□□ -1.77
ATPAF1-208ENST00000526821 LINC00158P58513 81 aa4□□□□□ -1.77
ATPAF1-208ENST00000526821 HIGD2BQ4VC39 106 aa4□□□□□ -1.77
ATPAF1-208ENST00000526821 C9orf116Q5BN46 136 aaPredicted RBP4□□□□□ -1.77
ATPAF1-208ENST00000526821 Q6ZR54 194 aa4□□□□□ -1.77
ATPAF1-208ENST00000526821 Q6ZRN7 208 aaPredicted RBP4□□□□□ -1.77
ATPAF1-208ENST00000526821 MIR7-3HGQ8N6C7 128 aa4□□□□□ -1.77
ATPAF1-208ENST00000526821 COPS9Q8WXC6 57 aa4□□□□□ -1.77
ATPAF1-208ENST00000526821 DNAH17Q9UFH2 4485 aa4□□□□□ -1.77
ATPAF1-208ENST00000526821 SACSQ9NZJ4 4579 aa3.99□□□□□ -1.77
ATPAF1-208ENST00000526821 C3orf84H3BNL1 204 aa3.99□□□□□ -1.77
ATPAF1-208ENST00000526821 PFN2P35080 140 aa3.99□□□□□ -1.77
ATPAF1-208ENST00000526821 NPC2P61916 151 aa3.99□□□□□ -1.77
ATPAF1-208ENST00000526821 Q6ZRU5 148 aa3.99□□□□□ -1.77
ATPAF1-208ENST00000526821 MTURNQ8N3F0 131 aa3.99□□□□□ -1.77
ATPAF1-208ENST00000526821 CAMK2N2Q96S95 79 aa3.99□□□□□ -1.77
ATPAF1-208ENST00000526821 A0A1W2PPM0 123 aa3.98□□□□□ -1.77
ATPAF1-208ENST00000526821 SYCNQ0VAF6 134 aa3.98□□□□□ -1.77
ATPAF1-208ENST00000526821 WFDC2Q14508 124 aa3.98□□□□□ -1.77
ATPAF1-208ENST00000526821 RAB37Q96AX2 223 aa3.98□□□□□ -1.77
ATPAF1-208ENST00000526821 SND1-IT1Q9HBX3 110 aa3.98□□□□□ -1.77
ATPAF1-208ENST00000526821 PRO1854Q9UHT4 67 aa3.98□□□□□ -1.77
ATPAF1-208ENST00000526821 HYDINQ4G0P3 5121 aa3.98□□□□□ -1.77
ATPAF1-208ENST00000526821 IGKV2-28A0A075B6P5 120 aa3.97□□□□□ -1.77
ATPAF1-208ENST00000526821 LRCOL1A6NCL2 159 aa3.97□□□□□ -1.77
ATPAF1-208ENST00000526821 TSPAN13O95857 204 aa3.97□□□□□ -1.77
ATPAF1-208ENST00000526821 IGKV2D-28P01615 120 aa3.97□□□□□ -1.77
ATPAF1-208ENST00000526821 TLX1NBP0CAT3 122 aa3.97□□□□□ -1.77
ATPAF1-208ENST00000526821 SIGMAR1Q99720 223 aa3.97□□□□□ -1.77
ATPAF1-208ENST00000526821 DNAH11Q96DT5 4516 aa3.96□□□□□ -1.78
ATPAF1-208ENST00000526821 NDUFC2-KCTD14E9PQ53 114 aa3.96□□□□□ -1.78
ATPAF1-208ENST00000526821 H3BUT2 72 aa3.96□□□□□ -1.78
ATPAF1-208ENST00000526821 J3QR89 54 aa3.96□□□□□ -1.78
ATPAF1-208ENST00000526821 LECT2O14960 151 aa3.96□□□□□ -1.78
ATPAF1-208ENST00000526821 NDUFC2O95298 119 aa3.96□□□□□ -1.78
ATPAF1-208ENST00000526821 FABP2P12104 132 aa3.96□□□□□ -1.78
ATPAF1-208ENST00000526821 CNBPP62633 177 aaKnown RBP3.96□□□□□ -1.78
ATPAF1-208ENST00000526821 Q8NDZ9 215 aa3.96□□□□□ -1.78
ATPAF1-208ENST00000526821 CARD19Q96LW7 228 aa3.96□□□□□ -1.78
ATPAF1-208ENST00000526821 SPCS1Q9Y6A9 102 aa3.96□□□□□ -1.78
ATPAF1-208ENST00000526821 DNAH5Q8TE73 4624 aa3.95□□□□□ -1.78
ATPAF1-208ENST00000526821 HECTD4Q9Y4D8 3996 aa3.95□□□□□ -1.78
ATPAF1-208ENST00000526821 F8W1H4 67 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms